data_3PPQ
#
_model_server_result.job_id            plrvnUhLOk4uyM_riDeqsQ 
_model_server_result.datetime_utc      '2024-11-26 09:43:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ppq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    3PPQ 
#
_exptl.entry_id    3PPQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              104.171 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLINE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3PPQ 
_cell.length_a            61.73 
_cell.length_b            90.15 
_cell.length_c            115.66 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PPQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C5 H14 N O 1' 
_chem_comp.formula_weight    104.171 
_chem_comp.id                CHT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLINE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C5 CHT sing 70 n n 
C4 O6 CHT sing 71 n n 
C4 HC41 CHT sing 72 n n 
C4 HC42 CHT sing 73 n n 
C5 N1 CHT sing 74 n n 
C5 HC51 CHT sing 75 n n 
C5 HC52 CHT sing 76 n n 
C6 N1 CHT sing 77 n n 
C6 H61 CHT sing 78 n n 
C6 H62 CHT sing 79 n n 
C6 H63 CHT sing 80 n n 
C7 N1 CHT sing 81 n n 
C7 H71 CHT sing 82 n n 
C7 H72 CHT sing 83 n n 
C7 H73 CHT sing 84 n n 
C8 N1 CHT sing 85 n n 
C8 H81 CHT sing 86 n n 
C8 H82 CHT sing 87 n n 
C8 H83 CHT sing 88 n n 
O6 HO6 CHT sing 89 n n 
#
_atom_sites.entry_id                     3PPQ 
_atom_sites.fract_transf_matrix[1][1]    0.0162 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011093 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008646 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CHT A 1 401 401 CHT CHT . 
D 2 CHT B 1 401 401 CHT CHT . 
E 3 HOH A 1 304 2 HOH HOH . 
E 3 HOH A 2 305 3 HOH HOH . 
E 3 HOH A 3 306 4 HOH HOH . 
E 3 HOH A 4 307 5 HOH HOH . 
E 3 HOH A 5 308 6 HOH HOH . 
E 3 HOH A 6 309 7 HOH HOH . 
E 3 HOH A 7 310 8 HOH HOH . 
E 3 HOH A 8 311 9 HOH HOH . 
E 3 HOH A 9 312 11 HOH HOH . 
E 3 HOH A 10 313 13 HOH HOH . 
E 3 HOH A 11 314 18 HOH HOH . 
E 3 HOH A 12 315 19 HOH HOH . 
E 3 HOH A 13 316 22 HOH HOH . 
E 3 HOH A 14 317 24 HOH HOH . 
E 3 HOH A 15 318 25 HOH HOH . 
E 3 HOH A 16 319 29 HOH HOH . 
E 3 HOH A 17 320 30 HOH HOH . 
E 3 HOH A 18 321 33 HOH HOH . 
E 3 HOH A 19 322 34 HOH HOH . 
E 3 HOH A 20 323 39 HOH HOH . 
E 3 HOH A 21 324 41 HOH HOH . 
E 3 HOH A 22 325 42 HOH HOH . 
E 3 HOH A 23 326 45 HOH HOH . 
E 3 HOH A 24 327 46 HOH HOH . 
E 3 HOH A 25 328 47 HOH HOH . 
E 3 HOH A 26 329 48 HOH HOH . 
E 3 HOH A 27 330 51 HOH HOH . 
E 3 HOH A 28 331 59 HOH HOH . 
E 3 HOH A 29 332 61 HOH HOH . 
E 3 HOH A 30 333 63 HOH HOH . 
E 3 HOH A 31 334 65 HOH HOH . 
E 3 HOH A 32 335 66 HOH HOH . 
E 3 HOH A 33 336 67 HOH HOH . 
E 3 HOH A 34 337 69 HOH HOH . 
E 3 HOH A 35 338 71 HOH HOH . 
E 3 HOH A 36 339 72 HOH HOH . 
E 3 HOH A 37 340 73 HOH HOH . 
E 3 HOH A 38 341 77 HOH HOH . 
E 3 HOH A 39 342 80 HOH HOH . 
E 3 HOH A 40 343 81 HOH HOH . 
E 3 HOH A 41 344 82 HOH HOH . 
E 3 HOH A 42 345 86 HOH HOH . 
E 3 HOH A 43 346 88 HOH HOH . 
E 3 HOH A 44 347 89 HOH HOH . 
E 3 HOH A 45 348 90 HOH HOH . 
E 3 HOH A 46 349 91 HOH HOH . 
E 3 HOH A 47 350 93 HOH HOH . 
E 3 HOH A 48 351 94 HOH HOH . 
E 3 HOH A 49 352 95 HOH HOH . 
E 3 HOH A 50 353 96 HOH HOH . 
E 3 HOH A 51 354 97 HOH HOH . 
E 3 HOH A 52 355 100 HOH HOH . 
E 3 HOH A 53 356 101 HOH HOH . 
E 3 HOH A 54 357 103 HOH HOH . 
E 3 HOH A 55 358 105 HOH HOH . 
E 3 HOH A 56 359 106 HOH HOH . 
E 3 HOH A 57 360 107 HOH HOH . 
E 3 HOH A 58 361 108 HOH HOH . 
E 3 HOH A 59 362 117 HOH HOH . 
E 3 HOH A 60 363 119 HOH HOH . 
E 3 HOH A 61 364 120 HOH HOH . 
E 3 HOH A 62 365 121 HOH HOH . 
E 3 HOH A 63 366 122 HOH HOH . 
F 3 HOH B 1 304 1 HOH HOH . 
F 3 HOH B 2 305 10 HOH HOH . 
F 3 HOH B 3 306 12 HOH HOH . 
F 3 HOH B 4 307 14 HOH HOH . 
F 3 HOH B 5 308 15 HOH HOH . 
F 3 HOH B 6 309 16 HOH HOH . 
F 3 HOH B 7 310 17 HOH HOH . 
F 3 HOH B 8 311 20 HOH HOH . 
F 3 HOH B 9 312 21 HOH HOH . 
F 3 HOH B 10 313 23 HOH HOH . 
F 3 HOH B 11 314 26 HOH HOH . 
F 3 HOH B 12 315 27 HOH HOH . 
F 3 HOH B 13 316 28 HOH HOH . 
F 3 HOH B 14 317 31 HOH HOH . 
F 3 HOH B 15 318 32 HOH HOH . 
F 3 HOH B 16 319 35 HOH HOH . 
F 3 HOH B 17 320 36 HOH HOH . 
F 3 HOH B 18 321 37 HOH HOH . 
F 3 HOH B 19 322 38 HOH HOH . 
F 3 HOH B 20 323 40 HOH HOH . 
F 3 HOH B 21 324 43 HOH HOH . 
F 3 HOH B 22 325 44 HOH HOH . 
F 3 HOH B 23 326 49 HOH HOH . 
F 3 HOH B 24 327 50 HOH HOH . 
F 3 HOH B 25 328 52 HOH HOH . 
F 3 HOH B 26 329 53 HOH HOH . 
F 3 HOH B 27 330 54 HOH HOH . 
F 3 HOH B 28 331 55 HOH HOH . 
F 3 HOH B 29 332 56 HOH HOH . 
F 3 HOH B 30 333 57 HOH HOH . 
F 3 HOH B 31 334 58 HOH HOH . 
F 3 HOH B 32 335 60 HOH HOH . 
F 3 HOH B 33 336 62 HOH HOH . 
F 3 HOH B 34 337 64 HOH HOH . 
F 3 HOH B 35 338 68 HOH HOH . 
F 3 HOH B 36 339 70 HOH HOH . 
F 3 HOH B 37 340 74 HOH HOH . 
F 3 HOH B 38 341 75 HOH HOH . 
F 3 HOH B 39 342 76 HOH HOH . 
F 3 HOH B 40 343 78 HOH HOH . 
F 3 HOH B 41 344 79 HOH HOH . 
F 3 HOH B 42 345 83 HOH HOH . 
F 3 HOH B 43 346 84 HOH HOH . 
F 3 HOH B 44 347 85 HOH HOH . 
F 3 HOH B 45 348 87 HOH HOH . 
F 3 HOH B 46 349 92 HOH HOH . 
F 3 HOH B 47 350 98 HOH HOH . 
F 3 HOH B 48 351 99 HOH HOH . 
F 3 HOH B 49 352 102 HOH HOH . 
F 3 HOH B 50 353 104 HOH HOH . 
F 3 HOH B 51 354 109 HOH HOH . 
F 3 HOH B 52 355 110 HOH HOH . 
F 3 HOH B 53 356 111 HOH HOH . 
F 3 HOH B 54 357 112 HOH HOH . 
F 3 HOH B 55 358 113 HOH HOH . 
F 3 HOH B 56 359 114 HOH HOH . 
F 3 HOH B 57 360 115 HOH HOH . 
F 3 HOH B 58 361 116 HOH HOH . 
F 3 HOH B 59 362 118 HOH HOH . 
F 3 HOH B 60 363 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 CHT . . . D 2 45.727 6.753 29.259 1 14.88 ? C4 CHT 401 B 1 
HETATM 2 C C5 CHT . . . D 2 45.201 6.669 27.816 1 7.65 ? C5 CHT 401 B 1 
HETATM 3 C C6 CHT . . . D 2 47.136 7.489 26.89 1 9.61 ? C6 CHT 401 B 1 
HETATM 4 C C7 CHT . . . D 2 45.217 8.871 27.287 1 6.23 ? C7 CHT 401 B 1 
HETATM 5 C C8 CHT . . . D 2 45.463 7.342 25.431 1 7.97 ? C8 CHT 401 B 1 
HETATM 6 O O6 CHT . . . D 2 46.933 6.608 29.393 1 18.55 ? O6 CHT 401 B 1 
HETATM 7 N N1 CHT . . . D 2 45.693 7.574 26.846 1 6.71 ? N1 CHT 401 B 1 
#
_model_server_stats.io_time_ms              78 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           7 
#