data_3PPZ # _model_server_result.job_id MSjvWBhrybi7SgChWaVSUQ _model_server_result.datetime_utc '2024-11-22 04:43:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ppz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3PPZ # _exptl.entry_id 3PPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PPZ _cell.length_a 95.271 _cell.length_b 95.271 _cell.length_c 179.692 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 191 A SER 703 1_555 A N TPO 192 A TPO 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C TPO 192 A TPO 704 1_555 A N PHE 193 A PHE 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C LEU 194 A LEU 706 1_555 A N SEP 195 A SEP 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C SEP 195 A SEP 707 1_555 A N SER 196 A SER 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 A C LYS 197 A LYS 709 1_555 A N SEP 198 A SEP 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C SEP 198 A SEP 710 1_555 A N ALA 199 A ALA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 B C SER 191 B SER 703 1_555 B N TPO 192 B TPO 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C TPO 192 B TPO 704 1_555 B N PHE 193 B PHE 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 B C LEU 194 B LEU 706 1_555 B N SEP 195 B SEP 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale10 B C SEP 195 B SEP 707 1_555 B N SER 196 B SER 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 B C LYS 197 B LYS 709 1_555 B N SEP 198 B SEP 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C SEP 198 B SEP 710 1_555 B N ALA 199 B ALA 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 306 n n O4 C21 STU sing 307 n n C25 C24 STU sing 308 n n C25 N3 STU sing 309 n n C25 H25 STU sing 310 n n C24 C23 STU sing 311 n n C24 H241 STU sing 312 n n C24 H242 STU sing 313 n n C23 C22 STU sing 314 n n C23 N4 STU sing 315 n n C23 H23 STU sing 316 n n C22 C21 STU sing 317 n n C22 O6 STU sing 318 n n C22 H22 STU sing 319 n n C21 C26 STU sing 320 n n C21 N2 STU sing 321 n n C26 H261 STU sing 322 n n C26 H262 STU sing 323 n n C26 H263 STU sing 324 n n N2 C18 STU sing 325 n y N2 C17 STU sing 326 n y C18 C19 STU doub 327 n y C18 C11 STU sing 328 n y C19 C6 STU sing 329 n y C19 N3 STU sing 330 n y C6 C7 STU doub 331 n y C6 C5 STU sing 332 n y C7 C10 STU sing 333 n y C7 C8 STU sing 334 n n C10 C11 STU doub 335 n y C10 C9 STU sing 336 n n C11 C12 STU sing 337 n y C12 C17 STU doub 338 n y C12 C13 STU sing 339 n y C17 C16 STU sing 340 n y C16 C15 STU doub 341 n y C16 H16 STU sing 342 n n C15 C14 STU sing 343 n y C15 H15 STU sing 344 n n C14 C13 STU doub 345 n y C14 H14 STU sing 346 n n C13 H13 STU sing 347 n n C9 N1 STU sing 348 n n C9 H91 STU sing 349 n n C9 H92 STU sing 350 n n N1 C8 STU sing 351 n n N1 HN1 STU sing 352 n n C8 O5 STU doub 353 n n C5 C20 STU doub 354 n y C5 C4 STU sing 355 n y C20 C1 STU sing 356 n y C20 N3 STU sing 357 n y C1 C2 STU doub 358 n y C1 H1 STU sing 359 n n C2 C3 STU sing 360 n y C2 H2 STU sing 361 n n C3 C4 STU doub 362 n y C3 H3 STU sing 363 n n C4 H4 STU sing 364 n n O6 C27 STU sing 365 n n C27 H271 STU sing 366 n n C27 H272 STU sing 367 n n C27 H273 STU sing 368 n n N4 C28 STU sing 369 n n N4 HN4 STU sing 370 n n C28 H281 STU sing 371 n n C28 H282 STU sing 372 n n C28 H283 STU sing 373 n n # _atom_sites.entry_id 3PPZ _atom_sites.fract_transf_matrix[1][1] 0.010496 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010496 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005565 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id STU _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id STU _pdbx_nonpoly_scheme.auth_mon_id STU _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . C 2 -12.714 41.558 -6.31 0.74 73.83 ? O4 STU 1 A 1 HETATM 2 C C25 STU . . . C 2 -13.961 41.819 -6.876 0.74 73.83 ? C25 STU 1 A 1 HETATM 3 C C24 STU . . . C 2 -14.768 42.865 -6.126 0.74 73.83 ? C24 STU 1 A 1 HETATM 4 C C23 STU . . . C 2 -13.887 43.452 -5.018 0.74 73.83 ? C23 STU 1 A 1 HETATM 5 C C22 STU . . . C 2 -13.482 42.284 -4.111 0.74 73.83 ? C22 STU 1 A 1 HETATM 6 C C21 STU . . . C 2 -12.677 41.295 -4.938 0.74 73.83 ? C21 STU 1 A 1 HETATM 7 C C26 STU . . . C 2 -11.21 41.537 -4.565 0.74 73.83 ? C26 STU 1 A 1 HETATM 8 N N2 STU . . . C 2 -13.021 39.913 -4.583 0.74 73.83 ? N2 STU 1 A 1 HETATM 9 C C18 STU . . . C 2 -13.928 39.144 -5.306 0.74 73.83 ? C18 STU 1 A 1 HETATM 10 C C19 STU . . . C 2 -14.677 39.458 -6.446 0.74 73.83 ? C19 STU 1 A 1 HETATM 11 C C6 STU . . . C 2 -15.536 38.511 -7.011 0.74 73.83 ? C6 STU 1 A 1 HETATM 12 C C7 STU . . . C 2 -15.646 37.229 -6.426 0.74 73.83 ? C7 STU 1 A 1 HETATM 13 C C10 STU . . . C 2 -14.895 36.925 -5.297 0.74 73.83 ? C10 STU 1 A 1 HETATM 14 C C11 STU . . . C 2 -14.044 37.87 -4.732 0.74 73.83 ? C11 STU 1 A 1 HETATM 15 C C12 STU . . . C 2 -13.146 37.875 -3.581 0.74 73.83 ? C12 STU 1 A 1 HETATM 16 C C17 STU . . . C 2 -12.543 39.155 -3.533 0.74 73.83 ? C17 STU 1 A 1 HETATM 17 C C16 STU . . . C 2 -11.637 39.445 -2.514 0.74 73.83 ? C16 STU 1 A 1 HETATM 18 C C15 STU . . . C 2 -11.351 38.444 -1.6 0.74 73.83 ? C15 STU 1 A 1 HETATM 19 C C14 STU . . . C 2 -11.947 37.198 -1.657 0.74 73.83 ? C14 STU 1 A 1 HETATM 20 C C13 STU . . . C 2 -12.853 36.879 -2.651 0.74 73.83 ? C13 STU 1 A 1 HETATM 21 C C9 STU . . . C 2 -15.247 35.503 -4.926 0.74 73.83 ? C9 STU 1 A 1 HETATM 22 N N1 STU . . . C 2 -16.335 35.106 -5.827 0.74 73.83 ? N1 STU 1 A 1 HETATM 23 C C8 STU . . . C 2 -16.461 36.053 -6.771 0.74 73.83 ? C8 STU 1 A 1 HETATM 24 O O5 STU . . . C 2 -17.184 35.967 -7.745 0.74 73.83 ? O5 STU 1 A 1 HETATM 25 C C5 STU . . . C 2 -16.151 39.168 -8.161 0.74 73.83 ? C5 STU 1 A 1 HETATM 26 C C20 STU . . . C 2 -15.614 40.475 -8.222 0.74 73.83 ? C20 STU 1 A 1 HETATM 27 C C1 STU . . . C 2 -16.013 41.361 -9.222 0.74 73.83 ? C1 STU 1 A 1 HETATM 28 C C2 STU . . . C 2 -16.929 40.897 -10.152 0.74 73.83 ? C2 STU 1 A 1 HETATM 29 C C3 STU . . . C 2 -17.449 39.617 -10.093 0.74 73.83 ? C3 STU 1 A 1 HETATM 30 C C4 STU . . . C 2 -17.081 38.723 -9.102 0.74 73.83 ? C4 STU 1 A 1 HETATM 31 N N3 STU . . . C 2 -14.734 40.611 -7.151 0.74 73.83 ? N3 STU 1 A 1 HETATM 32 O O6 STU . . . C 2 -14.672 41.637 -3.658 0.74 73.83 ? O6 STU 1 A 1 HETATM 33 C C27 STU . . . C 2 -14.616 41.673 -2.233 0.74 73.83 ? C27 STU 1 A 1 HETATM 34 N N4 STU . . . C 2 -14.647 44.447 -4.252 0.74 73.83 ? N4 STU 1 A 1 HETATM 35 C C28 STU . . . C 2 -13.79 44.885 -3.144 0.74 73.83 ? C28 STU 1 A 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #