data_3PSD # _model_server_result.job_id rWhWtF59uSnQeFP-s2Ow6w _model_server_result.datetime_utc '2024-12-21 14:10:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3psd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2}' # _entry.id 3PSD # _exptl.entry_id 3PSD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.445 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[1-(piperidin-4-yl)-3-(pyridin-4-yl)-1H-pyrazol-4-yl]indeno[1,2-c]pyrazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PSD _cell.length_a 94.98 _cell.length_b 94.98 _cell.length_c 161.73 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PSD _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C23 H20 N6' _chem_comp.formula_weight 380.445 _chem_comp.id SM7 _chem_comp.mon_nstd_flag . _chem_comp.name 6-[1-(piperidin-4-yl)-3-(pyridin-4-yl)-1H-pyrazol-4-yl]indeno[1,2-c]pyrazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 SM7 sing 288 n y C1 C5 SM7 doub 289 n y C1 C6 SM7 sing 290 n n C7 C2 SM7 sing 291 n y N3 C2 SM7 doub 292 n y N3 N4 SM7 sing 293 n y C13 N4 SM7 sing 294 n n N4 C5 SM7 sing 295 n y C5 H5 SM7 sing 296 n n C23 C6 SM7 doub 297 n n C6 C19 SM7 sing 298 n n C12 C7 SM7 doub 299 n y C7 C8 SM7 sing 300 n y C9 C8 SM7 doub 301 n y C8 H8 SM7 sing 302 n n N10 C9 SM7 sing 303 n y C9 H9 SM7 sing 304 n n C11 N10 SM7 doub 305 n y C11 C12 SM7 sing 306 n y C11 H11 SM7 sing 307 n n C12 H12 SM7 sing 308 n n C13 C14 SM7 sing 309 n n C13 C18 SM7 sing 310 n n C13 H13 SM7 sing 311 n n C14 C15 SM7 sing 312 n n C14 H14 SM7 sing 313 n n C14 H14A SM7 sing 314 n n C15 N16 SM7 sing 315 n n C15 H15 SM7 sing 316 n n C15 H15A SM7 sing 317 n n C17 N16 SM7 sing 318 n n N16 HN16 SM7 sing 319 n n C18 C17 SM7 sing 320 n n C17 H17 SM7 sing 321 n n C17 H17A SM7 sing 322 n n C18 H18 SM7 sing 323 n n C18 H18A SM7 sing 324 n n C19 C20 SM7 doub 325 n n C19 H19 SM7 sing 326 n n C21 C20 SM7 sing 327 n n C20 H20 SM7 sing 328 n n C22 C21 SM7 sing 329 n n C21 C24 SM7 doub 330 n n C26 C22 SM7 doub 331 n n C23 C22 SM7 sing 332 n n C23 H23 SM7 sing 333 n n C25 C24 SM7 sing 334 n n C24 N27 SM7 sing 335 n n C26 C25 SM7 sing 336 n n C25 C29 SM7 doub 337 n n C26 H26 SM7 sing 338 n n N28 N27 SM7 doub 339 n n C29 N28 SM7 sing 340 n n C29 H29 SM7 sing 341 n n # _atom_sites.entry_id 3PSD _atom_sites.fract_transf_matrix[1][1] 0.010529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SM7 A 1 1 1 SM7 SM7 . D 2 SM7 B 1 2 2 SM7 SM7 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SM7 . . . D 2 19.285 7.753 38.951 1 33.91 ? C1 SM7 2 B 1 HETATM 2 C C2 SM7 . . . D 2 19.136 9.119 39.204 1 33.95 ? C2 SM7 2 B 1 HETATM 3 N N3 SM7 . . . D 2 17.862 9.459 39.325 1 33.98 ? N3 SM7 2 B 1 HETATM 4 N N4 SM7 . . . D 2 17.162 8.31 39.146 1 34 ? N4 SM7 2 B 1 HETATM 5 C C5 SM7 . . . D 2 17.999 7.234 38.914 1 33.95 ? C5 SM7 2 B 1 HETATM 6 C C6 SM7 . . . D 2 20.5 6.954 38.746 1 33.83 ? C6 SM7 2 B 1 HETATM 7 C C7 SM7 . . . D 2 20.214 10.098 39.337 1 34.03 ? C7 SM7 2 B 1 HETATM 8 C C8 SM7 . . . D 2 21.166 10.299 38.313 1 34.1 ? C8 SM7 2 B 1 HETATM 9 C C9 SM7 . . . D 2 22.172 11.272 38.508 1 34.18 ? C9 SM7 2 B 1 HETATM 10 N N10 SM7 . . . D 2 22.249 12.018 39.634 1 34.15 ? N10 SM7 2 B 1 HETATM 11 C C11 SM7 . . . D 2 21.336 11.837 40.616 1 34.1 ? C11 SM7 2 B 1 HETATM 12 C C12 SM7 . . . D 2 20.297 10.887 40.507 1 34.06 ? C12 SM7 2 B 1 HETATM 13 C C13 SM7 . . . D 2 15.699 8.313 39.216 1 34.07 ? C13 SM7 2 B 1 HETATM 14 C C14 SM7 . . . D 2 15.027 7.625 38.004 1 34.15 ? C14 SM7 2 B 1 HETATM 15 C C15 SM7 . . . D 2 13.486 7.619 38.133 1 34.17 ? C15 SM7 2 B 1 HETATM 16 N N16 SM7 . . . D 2 12.955 8.977 38.415 1 34.13 ? N16 SM7 2 B 1 HETATM 17 C C17 SM7 . . . D 2 13.541 9.642 39.607 1 34.1 ? C17 SM7 2 B 1 HETATM 18 C C18 SM7 . . . D 2 15.083 9.7 39.526 1 34.09 ? C18 SM7 2 B 1 HETATM 19 C C19 SM7 . . . D 2 20.507 5.997 37.698 1 33.81 ? C19 SM7 2 B 1 HETATM 20 C C20 SM7 . . . D 2 21.637 5.188 37.436 1 33.73 ? C20 SM7 2 B 1 HETATM 21 C C21 SM7 . . . D 2 22.755 5.379 38.272 1 33.67 ? C21 SM7 2 B 1 HETATM 22 C C22 SM7 . . . D 2 22.778 6.319 39.321 1 33.64 ? C22 SM7 2 B 1 HETATM 23 C C23 SM7 . . . D 2 21.642 7.12 39.569 1 33.74 ? C23 SM7 2 B 1 HETATM 24 C C24 SM7 . . . D 2 24.037 4.728 38.271 1 33.6 ? C24 SM7 2 B 1 HETATM 25 C C25 SM7 . . . D 2 24.758 5.282 39.284 1 33.52 ? C25 SM7 2 B 1 HETATM 26 C C26 SM7 . . . D 2 24.114 6.366 40.121 1 33.54 ? C26 SM7 2 B 1 HETATM 27 N N27 SM7 . . . D 2 24.645 3.787 37.572 1 33.57 ? N27 SM7 2 B 1 HETATM 28 N N28 SM7 . . . D 2 25.859 3.74 38.199 1 33.5 ? N28 SM7 2 B 1 HETATM 29 C C29 SM7 . . . D 2 25.984 4.637 39.258 1 33.49 ? C29 SM7 2 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #