data_3PSR # _model_server_result.job_id 3tbdFUgstojtjF_X8ejtZA _model_server_result.datetime_utc '2024-11-17 12:43:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3psr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 3PSR # _exptl.entry_id 3PSR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PSR _cell.length_a 52.15 _cell.length_b 56.67 _cell.length_c 76.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PSR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 46 A CYS 46 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? disulf ? disulf2 B SG CYS 46 B CYS 46 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 D ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc2 A OD1 ASP 24 A ASP 24 1_555 D ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc3 A OD2 ASP 24 A ASP 24 1_555 D ZN ZN . A ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc4 A OD1 ASP 62 A ASP 62 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc5 A OD1 ASN 64 A ASN 64 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc6 A OD1 ASP 66 A ASP 66 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc7 A OD2 ASP 66 A ASP 66 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.304 ? metalc ? metalc8 A O LYS 68 A LYS 68 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc9 A OE1 GLU 73 A GLU 73 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc10 A OE2 GLU 73 A GLU 73 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc11 C CA CA . A CA 102 1_555 F O HOH . A HOH 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc12 D ZN ZN . A ZN 103 1_555 B NE2 HIS 86 B HIS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc13 D ZN ZN . A ZN 103 1_555 B NE2 HIS 90 B HIS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc14 B OD1 ASP 62 B ASP 62 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc15 B OD1 ASN 64 B ASN 64 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc16 B OD1 ASP 66 B ASP 66 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc17 B OD2 ASP 66 B ASP 66 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.281 ? metalc ? metalc18 B O LYS 68 B LYS 68 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc19 B OE1 GLU 73 B GLU 73 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc20 B OE2 GLU 73 B GLU 73 1_555 E CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc21 E CA CA . B CA 102 1_555 G O HOH . B HOH 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PSR _atom_sites.fract_transf_matrix[1][1] 0.019175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013092 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 102 102 CA CA . D 3 ZN A 1 103 103 ZN ZN . E 2 CA B 1 102 102 CA CA . F 4 HOH A 1 201 201 HOH HOH . F 4 HOH A 2 202 202 HOH HOH . F 4 HOH A 3 203 203 HOH HOH . F 4 HOH A 4 205 205 HOH HOH . F 4 HOH A 5 206 206 HOH HOH . F 4 HOH A 6 208 208 HOH HOH . F 4 HOH A 7 209 209 HOH HOH . F 4 HOH A 8 210 210 HOH HOH . F 4 HOH A 9 213 213 HOH HOH . F 4 HOH A 10 218 218 HOH HOH . F 4 HOH A 11 219 219 HOH HOH . F 4 HOH A 12 220 220 HOH HOH . F 4 HOH A 13 221 221 HOH HOH . F 4 HOH A 14 224 224 HOH HOH . F 4 HOH A 15 225 225 HOH HOH . F 4 HOH A 16 226 226 HOH HOH . F 4 HOH A 17 227 227 HOH HOH . F 4 HOH A 18 228 228 HOH HOH . F 4 HOH A 19 229 229 HOH HOH . F 4 HOH A 20 231 231 HOH HOH . F 4 HOH A 21 233 233 HOH HOH . F 4 HOH A 22 234 234 HOH HOH . F 4 HOH A 23 240 240 HOH HOH . F 4 HOH A 24 243 243 HOH HOH . F 4 HOH A 25 245 245 HOH HOH . F 4 HOH A 26 247 247 HOH HOH . F 4 HOH A 27 249 249 HOH HOH . F 4 HOH A 28 253 253 HOH HOH . F 4 HOH A 29 255 255 HOH HOH . F 4 HOH A 30 256 256 HOH HOH . F 4 HOH A 31 258 258 HOH HOH . F 4 HOH A 32 262 262 HOH HOH . F 4 HOH A 33 263 263 HOH HOH . F 4 HOH A 34 264 264 HOH HOH . F 4 HOH A 35 266 266 HOH HOH . F 4 HOH A 36 267 267 HOH HOH . F 4 HOH A 37 269 269 HOH HOH . G 4 HOH B 1 204 204 HOH HOH . G 4 HOH B 2 207 207 HOH HOH . G 4 HOH B 3 211 211 HOH HOH . G 4 HOH B 4 212 212 HOH HOH . G 4 HOH B 5 214 214 HOH HOH . G 4 HOH B 6 215 215 HOH HOH . G 4 HOH B 7 216 216 HOH HOH . G 4 HOH B 8 217 217 HOH HOH . G 4 HOH B 9 222 222 HOH HOH . G 4 HOH B 10 223 223 HOH HOH . G 4 HOH B 11 230 230 HOH HOH . G 4 HOH B 12 232 232 HOH HOH . G 4 HOH B 13 235 235 HOH HOH . G 4 HOH B 14 236 236 HOH HOH . G 4 HOH B 15 237 237 HOH HOH . G 4 HOH B 16 238 238 HOH HOH . G 4 HOH B 17 239 239 HOH HOH . G 4 HOH B 18 241 241 HOH HOH . G 4 HOH B 19 242 242 HOH HOH . G 4 HOH B 20 244 244 HOH HOH . G 4 HOH B 21 246 246 HOH HOH . G 4 HOH B 22 248 248 HOH HOH . G 4 HOH B 23 250 250 HOH HOH . G 4 HOH B 24 251 251 HOH HOH . G 4 HOH B 25 252 252 HOH HOH . G 4 HOH B 26 254 254 HOH HOH . G 4 HOH B 27 257 257 HOH HOH . G 4 HOH B 28 259 259 HOH HOH . G 4 HOH B 29 260 260 HOH HOH . G 4 HOH B 30 261 261 HOH HOH . G 4 HOH B 31 265 265 HOH HOH . G 4 HOH B 32 268 268 HOH HOH . G 4 HOH B 33 270 270 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 3.528 _atom_site.Cartn_y 6.831 _atom_site.Cartn_z 35.132 _atom_site.occupancy 0.77 _atom_site.B_iso_or_equiv 33.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #