data_3PT2 # _model_server_result.job_id dKOKjg4W2938158h2Hiz0A _model_server_result.datetime_utc '2024-12-24 01:23:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pt2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":76}' # _entry.id 3PT2 # _exptl.entry_id 3PT2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.006 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1.7.6 3-bromanylpropan-1-amine' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3PT2 _cell.length_a 146.01 _cell.length_b 146.01 _cell.length_c 58.14 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+5/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 73.005 126.448369 96.9 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 3 A GLY 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N ASP 5 A ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A SG CYS 43 A CYS 40 1_555 E C1 4LJ . B 4LJ 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? covale ? covale4 A C THR 52 A THR 49 1_555 A N MSE 53 A MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C MSE 53 A MSE 50 1_555 A N PRO 54 A PRO 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C ARG 95 A ARG 92 1_555 A N MSE 96 A MSE 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C MSE 96 A MSE 93 1_555 A N LEU 97 A LEU 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C SER 109 A SER 106 1_555 A N MSE 110 A MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C MSE 110 A MSE 107 1_555 A N LEU 111 A LEU 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C GLU 114 A GLU 111 1_555 A N MSE 115 A MSE 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 A C MSE 115 A MSE 112 1_555 A N GLY 116 A GLY 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C GLY 75 B GLY 75 1_555 E N1 4LJ . B 4LJ 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? # _chem_comp.formula 'C3 H8 Br N' _chem_comp.formula_weight 138.006 _chem_comp.id 4LJ _chem_comp.mon_nstd_flag . _chem_comp.name '1.7.6 3-bromanylpropan-1-amine' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PT2 _atom_sites.fract_transf_matrix[1][1] 0.006849 _atom_sites.fract_transf_matrix[1][2] 0.003954 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 185 185 SO4 SO4 . D 4 ACT A 1 186 186 ACT ACT . E 5 4LJ B 1 76 76 4LJ 3CN . F 3 SO4 B 1 77 77 SO4 SO4 . G 3 SO4 B 1 78 78 SO4 SO4 . H 6 HOH A 1 187 187 HOH HOH . H 6 HOH A 2 188 188 HOH HOH . H 6 HOH A 3 189 189 HOH HOH . H 6 HOH A 4 190 190 HOH HOH . H 6 HOH A 5 191 191 HOH HOH . H 6 HOH A 6 192 192 HOH HOH . H 6 HOH A 7 193 193 HOH HOH . H 6 HOH A 8 194 194 HOH HOH . H 6 HOH A 9 195 195 HOH HOH . H 6 HOH A 10 196 196 HOH HOH . H 6 HOH A 11 197 197 HOH HOH . H 6 HOH A 12 198 198 HOH HOH . H 6 HOH A 13 199 199 HOH HOH . H 6 HOH A 14 200 200 HOH HOH . H 6 HOH A 15 201 201 HOH HOH . H 6 HOH A 16 202 202 HOH HOH . H 6 HOH A 17 203 203 HOH HOH . H 6 HOH A 18 204 204 HOH HOH . H 6 HOH A 19 205 205 HOH HOH . H 6 HOH A 20 206 206 HOH HOH . H 6 HOH A 21 207 207 HOH HOH . H 6 HOH A 22 208 208 HOH HOH . H 6 HOH A 23 209 209 HOH HOH . H 6 HOH A 24 210 210 HOH HOH . H 6 HOH A 25 211 211 HOH HOH . H 6 HOH A 26 212 212 HOH HOH . H 6 HOH A 27 213 213 HOH HOH . H 6 HOH A 28 214 214 HOH HOH . H 6 HOH A 29 215 215 HOH HOH . H 6 HOH A 30 216 216 HOH HOH . H 6 HOH A 31 217 217 HOH HOH . H 6 HOH A 32 218 218 HOH HOH . H 6 HOH A 33 219 219 HOH HOH . H 6 HOH A 34 220 220 HOH HOH . H 6 HOH A 35 221 221 HOH HOH . H 6 HOH A 36 222 222 HOH HOH . H 6 HOH A 37 223 223 HOH HOH . H 6 HOH A 38 224 224 HOH HOH . H 6 HOH A 39 225 225 HOH HOH . H 6 HOH A 40 226 226 HOH HOH . H 6 HOH A 41 227 227 HOH HOH . H 6 HOH A 42 228 228 HOH HOH . H 6 HOH A 43 229 229 HOH HOH . H 6 HOH A 44 230 230 HOH HOH . H 6 HOH A 45 231 231 HOH HOH . H 6 HOH A 46 232 232 HOH HOH . H 6 HOH A 47 233 233 HOH HOH . H 6 HOH A 48 234 234 HOH HOH . H 6 HOH A 49 235 235 HOH HOH . H 6 HOH A 50 236 236 HOH HOH . H 6 HOH A 51 237 237 HOH HOH . H 6 HOH A 52 238 238 HOH HOH . H 6 HOH A 53 239 239 HOH HOH . H 6 HOH A 54 240 240 HOH HOH . H 6 HOH A 55 241 241 HOH HOH . H 6 HOH A 56 242 242 HOH HOH . H 6 HOH A 57 243 243 HOH HOH . H 6 HOH A 58 244 244 HOH HOH . H 6 HOH A 59 245 245 HOH HOH . H 6 HOH A 60 246 246 HOH HOH . H 6 HOH A 61 247 247 HOH HOH . H 6 HOH A 62 248 248 HOH HOH . H 6 HOH A 63 249 249 HOH HOH . H 6 HOH A 64 250 250 HOH HOH . H 6 HOH A 65 251 251 HOH HOH . H 6 HOH A 66 252 252 HOH HOH . I 6 HOH B 1 79 79 HOH HOH . I 6 HOH B 2 80 80 HOH HOH . I 6 HOH B 3 81 81 HOH HOH . I 6 HOH B 4 82 82 HOH HOH . I 6 HOH B 5 83 83 HOH HOH . I 6 HOH B 6 84 84 HOH HOH . I 6 HOH B 7 85 85 HOH HOH . I 6 HOH B 8 86 86 HOH HOH . I 6 HOH B 9 87 87 HOH HOH . I 6 HOH B 10 88 88 HOH HOH . I 6 HOH B 11 89 89 HOH HOH . I 6 HOH B 12 90 90 HOH HOH . I 6 HOH B 13 91 91 HOH HOH . I 6 HOH B 14 92 92 HOH HOH . I 6 HOH B 15 93 93 HOH HOH . I 6 HOH B 16 94 94 HOH HOH . I 6 HOH B 17 95 95 HOH HOH . I 6 HOH B 18 96 96 HOH HOH . I 6 HOH B 19 97 97 HOH HOH . I 6 HOH B 20 98 98 HOH HOH . I 6 HOH B 21 99 99 HOH HOH . I 6 HOH B 22 100 100 HOH HOH . I 6 HOH B 23 101 101 HOH HOH . I 6 HOH B 24 102 102 HOH HOH . I 6 HOH B 25 103 103 HOH HOH . I 6 HOH B 26 104 104 HOH HOH . I 6 HOH B 27 105 105 HOH HOH . I 6 HOH B 28 106 106 HOH HOH . I 6 HOH B 29 107 107 HOH HOH . I 6 HOH B 30 108 108 HOH HOH . I 6 HOH B 31 109 109 HOH HOH . I 6 HOH B 32 110 110 HOH HOH . I 6 HOH B 33 111 111 HOH HOH . I 6 HOH B 34 112 112 HOH HOH . I 6 HOH B 35 113 113 HOH HOH . I 6 HOH B 36 114 114 HOH HOH . I 6 HOH B 37 115 115 HOH HOH . I 6 HOH B 38 116 116 HOH HOH . I 6 HOH B 39 117 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4LJ . . . E 5 17.5 73.465 39.169 1 24.56 ? C1 4LJ 76 B 1 HETATM 2 C C2 4LJ . . . E 5 16.836 74.306 40.252 1 31.4 ? C2 4LJ 76 B 1 HETATM 3 C C3 4LJ . . . E 5 15.845 73.482 41.088 1 35.09 ? C3 4LJ 76 B 1 HETATM 4 N N1 4LJ . . . E 5 16.523 72.714 42.091 1 34.69 ? N1 4LJ 76 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 517 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #