data_3PTR
#
_model_server_result.job_id            6PLtpuWby42-qc2Bo0ge2g 
_model_server_result.datetime_utc      '2024-11-26 15:39:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ptr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":9}' 
#
_entry.id    3PTR 
#
_exptl.entry_id    3PTR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    19 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3PTR 
_cell.length_a            65.737 
_cell.length_b            66.512 
_cell.length_c            104.567 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PTR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3PTR 
_atom_sites.fract_transf_matrix[1][1]    0.015212 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015035 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009563 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO B 1 1 1 EDO EDO . 
C 2 EDO B 1 2 2 EDO EDO . 
D 2 EDO B 1 3 3 EDO EDO . 
E 2 EDO B 1 4 4 EDO EDO . 
F 2 EDO B 1 5 5 EDO EDO . 
G 2 EDO B 1 6 6 EDO EDO . 
H 2 EDO B 1 7 7 EDO EDO . 
I 2 EDO B 1 8 8 EDO EDO . 
J 2 EDO B 1 9 9 EDO EDO . 
K 2 EDO B 1 10 10 EDO EDO . 
L 2 EDO B 1 11 11 EDO EDO . 
M 2 EDO B 1 13 13 EDO EDO . 
N 2 EDO B 1 14 14 EDO EDO . 
O 2 EDO B 1 15 15 EDO EDO . 
P 2 EDO B 1 16 16 EDO EDO . 
Q 2 EDO B 1 17 17 EDO EDO . 
R 2 EDO B 1 18 18 EDO EDO . 
S 2 EDO B 1 19 19 EDO EDO . 
T 2 EDO B 1 20 20 EDO EDO . 
U 3 HOH B 1 12 12 HOH HOH . 
U 3 HOH B 2 21 21 HOH HOH . 
U 3 HOH B 3 22 22 HOH HOH . 
U 3 HOH B 4 23 23 HOH HOH . 
U 3 HOH B 5 24 24 HOH HOH . 
U 3 HOH B 6 25 25 HOH HOH . 
U 3 HOH B 7 26 26 HOH HOH . 
U 3 HOH B 8 27 27 HOH HOH . 
U 3 HOH B 9 28 28 HOH HOH . 
U 3 HOH B 10 29 29 HOH HOH . 
U 3 HOH B 11 30 30 HOH HOH . 
U 3 HOH B 12 31 31 HOH HOH . 
U 3 HOH B 13 32 32 HOH HOH . 
U 3 HOH B 14 33 33 HOH HOH . 
U 3 HOH B 15 34 34 HOH HOH . 
U 3 HOH B 16 35 35 HOH HOH . 
U 3 HOH B 17 36 36 HOH HOH . 
U 3 HOH B 18 37 37 HOH HOH . 
U 3 HOH B 19 38 38 HOH HOH . 
U 3 HOH B 20 39 39 HOH HOH . 
U 3 HOH B 21 40 40 HOH HOH . 
U 3 HOH B 22 41 41 HOH HOH . 
U 3 HOH B 23 42 42 HOH HOH . 
U 3 HOH B 24 43 43 HOH HOH . 
U 3 HOH B 25 44 44 HOH HOH . 
U 3 HOH B 26 45 45 HOH HOH . 
U 3 HOH B 27 47 47 HOH HOH . 
U 3 HOH B 28 48 48 HOH HOH . 
U 3 HOH B 29 49 49 HOH HOH . 
U 3 HOH B 30 50 50 HOH HOH . 
U 3 HOH B 31 51 51 HOH HOH . 
U 3 HOH B 32 52 52 HOH HOH . 
U 3 HOH B 33 53 53 HOH HOH . 
U 3 HOH B 34 54 54 HOH HOH . 
U 3 HOH B 35 55 55 HOH HOH . 
U 3 HOH B 36 56 56 HOH HOH . 
U 3 HOH B 37 57 57 HOH HOH . 
U 3 HOH B 38 58 58 HOH HOH . 
U 3 HOH B 39 452 1 HOH HOH . 
U 3 HOH B 40 453 2 HOH HOH . 
U 3 HOH B 41 454 3 HOH HOH . 
U 3 HOH B 42 455 4 HOH HOH . 
U 3 HOH B 43 456 5 HOH HOH . 
U 3 HOH B 44 457 6 HOH HOH . 
U 3 HOH B 45 458 7 HOH HOH . 
U 3 HOH B 46 459 8 HOH HOH . 
U 3 HOH B 47 460 9 HOH HOH . 
U 3 HOH B 48 461 10 HOH HOH . 
U 3 HOH B 49 462 11 HOH HOH . 
U 3 HOH B 50 463 13 HOH HOH . 
U 3 HOH B 51 464 14 HOH HOH . 
U 3 HOH B 52 465 15 HOH HOH . 
U 3 HOH B 53 466 16 HOH HOH . 
U 3 HOH B 54 467 17 HOH HOH . 
U 3 HOH B 55 468 18 HOH HOH . 
U 3 HOH B 56 469 19 HOH HOH . 
U 3 HOH B 57 470 20 HOH HOH . 
U 3 HOH B 58 471 60 HOH HOH . 
U 3 HOH B 59 472 61 HOH HOH . 
U 3 HOH B 60 473 62 HOH HOH . 
U 3 HOH B 61 474 63 HOH HOH . 
U 3 HOH B 62 475 64 HOH HOH . 
U 3 HOH B 63 476 65 HOH HOH . 
U 3 HOH B 64 477 66 HOH HOH . 
U 3 HOH B 65 478 67 HOH HOH . 
U 3 HOH B 66 479 68 HOH HOH . 
U 3 HOH B 67 480 70 HOH HOH . 
U 3 HOH B 68 481 71 HOH HOH . 
U 3 HOH B 69 482 72 HOH HOH . 
U 3 HOH B 70 483 73 HOH HOH . 
U 3 HOH B 71 484 74 HOH HOH . 
U 3 HOH B 72 485 75 HOH HOH . 
U 3 HOH B 73 486 76 HOH HOH . 
U 3 HOH B 74 487 77 HOH HOH . 
U 3 HOH B 75 488 78 HOH HOH . 
U 3 HOH B 76 489 79 HOH HOH . 
U 3 HOH B 77 490 80 HOH HOH . 
U 3 HOH B 78 491 81 HOH HOH . 
U 3 HOH B 79 492 82 HOH HOH . 
U 3 HOH B 80 493 83 HOH HOH . 
U 3 HOH B 81 494 84 HOH HOH . 
U 3 HOH B 82 495 85 HOH HOH . 
U 3 HOH B 83 496 87 HOH HOH . 
U 3 HOH B 84 497 89 HOH HOH . 
U 3 HOH B 85 498 90 HOH HOH . 
U 3 HOH B 86 499 91 HOH HOH . 
U 3 HOH B 87 500 92 HOH HOH . 
U 3 HOH B 88 501 93 HOH HOH . 
U 3 HOH B 89 502 94 HOH HOH . 
U 3 HOH B 90 503 96 HOH HOH . 
U 3 HOH B 91 504 97 HOH HOH . 
U 3 HOH B 92 505 98 HOH HOH . 
U 3 HOH B 93 506 99 HOH HOH . 
U 3 HOH B 94 507 100 HOH HOH . 
U 3 HOH B 95 508 101 HOH HOH . 
U 3 HOH B 96 509 102 HOH HOH . 
U 3 HOH B 97 510 103 HOH HOH . 
U 3 HOH B 98 511 104 HOH HOH . 
U 3 HOH B 99 512 105 HOH HOH . 
U 3 HOH B 100 513 106 HOH HOH . 
U 3 HOH B 101 514 107 HOH HOH . 
U 3 HOH B 102 515 108 HOH HOH . 
U 3 HOH B 103 516 109 HOH HOH . 
U 3 HOH B 104 517 110 HOH HOH . 
U 3 HOH B 105 518 112 HOH HOH . 
U 3 HOH B 106 519 114 HOH HOH . 
U 3 HOH B 107 520 115 HOH HOH . 
U 3 HOH B 108 521 117 HOH HOH . 
U 3 HOH B 109 522 118 HOH HOH . 
U 3 HOH B 110 523 119 HOH HOH . 
U 3 HOH B 111 524 120 HOH HOH . 
U 3 HOH B 112 525 121 HOH HOH . 
U 3 HOH B 113 526 122 HOH HOH . 
U 3 HOH B 114 527 123 HOH HOH . 
U 3 HOH B 115 528 124 HOH HOH . 
U 3 HOH B 116 529 126 HOH HOH . 
U 3 HOH B 117 530 127 HOH HOH . 
U 3 HOH B 118 531 128 HOH HOH . 
U 3 HOH B 119 532 129 HOH HOH . 
U 3 HOH B 120 533 130 HOH HOH . 
U 3 HOH B 121 534 131 HOH HOH . 
U 3 HOH B 122 535 132 HOH HOH . 
U 3 HOH B 123 536 133 HOH HOH . 
U 3 HOH B 124 537 135 HOH HOH . 
U 3 HOH B 125 538 137 HOH HOH . 
U 3 HOH B 126 539 138 HOH HOH . 
U 3 HOH B 127 540 139 HOH HOH . 
U 3 HOH B 128 541 140 HOH HOH . 
U 3 HOH B 129 542 142 HOH HOH . 
U 3 HOH B 130 543 143 HOH HOH . 
U 3 HOH B 131 544 146 HOH HOH . 
U 3 HOH B 132 545 147 HOH HOH . 
U 3 HOH B 133 546 148 HOH HOH . 
U 3 HOH B 134 547 149 HOH HOH . 
U 3 HOH B 135 548 150 HOH HOH . 
U 3 HOH B 136 549 151 HOH HOH . 
U 3 HOH B 137 550 152 HOH HOH . 
U 3 HOH B 138 551 153 HOH HOH . 
U 3 HOH B 139 552 155 HOH HOH . 
U 3 HOH B 140 553 156 HOH HOH . 
U 3 HOH B 141 554 158 HOH HOH . 
U 3 HOH B 142 555 159 HOH HOH . 
U 3 HOH B 143 556 160 HOH HOH . 
U 3 HOH B 144 557 161 HOH HOH . 
U 3 HOH B 145 558 164 HOH HOH . 
U 3 HOH B 146 559 165 HOH HOH . 
U 3 HOH B 147 560 167 HOH HOH . 
U 3 HOH B 148 561 171 HOH HOH . 
U 3 HOH B 149 562 172 HOH HOH . 
U 3 HOH B 150 563 173 HOH HOH . 
U 3 HOH B 151 564 175 HOH HOH . 
U 3 HOH B 152 565 176 HOH HOH . 
U 3 HOH B 153 566 177 HOH HOH . 
U 3 HOH B 154 567 178 HOH HOH . 
U 3 HOH B 155 568 179 HOH HOH . 
U 3 HOH B 156 569 181 HOH HOH . 
U 3 HOH B 157 570 182 HOH HOH . 
U 3 HOH B 158 571 184 HOH HOH . 
U 3 HOH B 159 572 187 HOH HOH . 
U 3 HOH B 160 573 188 HOH HOH . 
U 3 HOH B 161 574 190 HOH HOH . 
U 3 HOH B 162 575 192 HOH HOH . 
U 3 HOH B 163 576 193 HOH HOH . 
U 3 HOH B 164 577 194 HOH HOH . 
U 3 HOH B 165 578 195 HOH HOH . 
U 3 HOH B 166 579 196 HOH HOH . 
U 3 HOH B 167 580 197 HOH HOH . 
U 3 HOH B 168 581 198 HOH HOH . 
U 3 HOH B 169 582 199 HOH HOH . 
U 3 HOH B 170 583 200 HOH HOH . 
U 3 HOH B 171 584 201 HOH HOH . 
U 3 HOH B 172 585 202 HOH HOH . 
U 3 HOH B 173 586 203 HOH HOH . 
U 3 HOH B 174 587 204 HOH HOH . 
U 3 HOH B 175 588 205 HOH HOH . 
U 3 HOH B 176 589 206 HOH HOH . 
U 3 HOH B 177 590 207 HOH HOH . 
U 3 HOH B 178 591 208 HOH HOH . 
U 3 HOH B 179 592 209 HOH HOH . 
U 3 HOH B 180 593 210 HOH HOH . 
U 3 HOH B 181 594 211 HOH HOH . 
U 3 HOH B 182 595 212 HOH HOH . 
U 3 HOH B 183 596 213 HOH HOH . 
U 3 HOH B 184 597 214 HOH HOH . 
U 3 HOH B 185 598 215 HOH HOH . 
U 3 HOH B 186 599 216 HOH HOH . 
U 3 HOH B 187 600 218 HOH HOH . 
U 3 HOH B 188 601 220 HOH HOH . 
U 3 HOH B 189 602 221 HOH HOH . 
U 3 HOH B 190 603 223 HOH HOH . 
U 3 HOH B 191 604 226 HOH HOH . 
U 3 HOH B 192 605 227 HOH HOH . 
U 3 HOH B 193 606 228 HOH HOH . 
U 3 HOH B 194 607 229 HOH HOH . 
U 3 HOH B 195 608 230 HOH HOH . 
U 3 HOH B 196 609 231 HOH HOH . 
U 3 HOH B 197 610 232 HOH HOH . 
U 3 HOH B 198 611 234 HOH HOH . 
U 3 HOH B 199 612 235 HOH HOH . 
U 3 HOH B 200 613 236 HOH HOH . 
U 3 HOH B 201 614 238 HOH HOH . 
U 3 HOH B 202 615 239 HOH HOH . 
U 3 HOH B 203 616 240 HOH HOH . 
U 3 HOH B 204 617 243 HOH HOH . 
U 3 HOH B 205 618 244 HOH HOH . 
U 3 HOH B 206 619 245 HOH HOH . 
U 3 HOH B 207 620 246 HOH HOH . 
U 3 HOH B 208 621 247 HOH HOH . 
U 3 HOH B 209 622 248 HOH HOH . 
U 3 HOH B 210 623 249 HOH HOH . 
U 3 HOH B 211 624 250 HOH HOH . 
U 3 HOH B 212 625 251 HOH HOH . 
U 3 HOH B 213 626 252 HOH HOH . 
U 3 HOH B 214 627 253 HOH HOH . 
U 3 HOH B 215 628 254 HOH HOH . 
U 3 HOH B 216 629 255 HOH HOH . 
U 3 HOH B 217 630 256 HOH HOH . 
U 3 HOH B 218 631 257 HOH HOH . 
U 3 HOH B 219 632 258 HOH HOH . 
U 3 HOH B 220 633 259 HOH HOH . 
U 3 HOH B 221 634 260 HOH HOH . 
U 3 HOH B 222 635 261 HOH HOH . 
U 3 HOH B 223 636 262 HOH HOH . 
U 3 HOH B 224 637 263 HOH HOH . 
U 3 HOH B 225 638 264 HOH HOH . 
U 3 HOH B 226 639 265 HOH HOH . 
U 3 HOH B 227 640 266 HOH HOH . 
U 3 HOH B 228 641 267 HOH HOH . 
U 3 HOH B 229 642 268 HOH HOH . 
U 3 HOH B 230 643 269 HOH HOH . 
U 3 HOH B 231 644 270 HOH HOH . 
U 3 HOH B 232 645 271 HOH HOH . 
U 3 HOH B 233 646 272 HOH HOH . 
U 3 HOH B 234 647 273 HOH HOH . 
U 3 HOH B 235 648 274 HOH HOH . 
U 3 HOH B 236 649 275 HOH HOH . 
U 3 HOH B 237 650 276 HOH HOH . 
U 3 HOH B 238 651 278 HOH HOH . 
U 3 HOH B 239 652 279 HOH HOH . 
U 3 HOH B 240 653 280 HOH HOH . 
U 3 HOH B 241 654 282 HOH HOH . 
U 3 HOH B 242 655 283 HOH HOH . 
U 3 HOH B 243 656 284 HOH HOH . 
U 3 HOH B 244 657 285 HOH HOH . 
U 3 HOH B 245 658 286 HOH HOH . 
U 3 HOH B 246 659 287 HOH HOH . 
U 3 HOH B 247 660 288 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 2 3.214 20.997 11.092 1 44.02 ? C1 EDO 9 B 1 
HETATM 2 O O1 EDO . . . J 2 2.654 19.774 11.589 1 40.86 ? O1 EDO 9 B 1 
HETATM 3 C C2 EDO . . . J 2 4.554 20.665 10.454 1 42.65 ? C2 EDO 9 B 1 
HETATM 4 O O2 EDO . . . J 2 4.383 19.496 9.644 1 42.74 ? O2 EDO 9 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#