data_3PUA
#
_model_server_result.job_id            pDM9ogK4y17AOzkxURz10w 
_model_server_result.datetime_utc      '2025-07-01 16:16:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pua 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":11}' 
#
_entry.id    3PUA 
#
_exptl.entry_id    3PUA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.09 
_cell.angle_gamma         90 
_cell.entry_id            3PUA 
_cell.length_a            109.575 
_cell.length_b            65.767 
_cell.length_c            66.612 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PUA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B NI NI . A NI 2 1_555 A NE2 HIS 190 A HIS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc2 B NI NI . A NI 2 1_555 A OD1 ASP 192 A ASP 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc3 B NI NI . A NI 2 1_555 A OH TYR 262 A TYR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc4 B NI NI . A NI 2 1_555 O O2' OGA . A OGA 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc5 B NI NI . A NI 2 1_555 O O2 OGA . A OGA 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc6 B NI NI . A NI 2 1_555 P O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3PUA 
_atom_sites.fract_transf_matrix[1][1]    0.009126 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001954 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015205 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015353 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 2 2 NI NI . 
C 3 EDO A 1 1 1 EDO EDO . 
D 3 EDO A 1 452 2 EDO EDO . 
E 3 EDO A 1 3 3 EDO EDO . 
F 3 EDO A 1 4 4 EDO EDO . 
G 3 EDO A 1 5 5 EDO EDO . 
H 3 EDO A 1 6 6 EDO EDO . 
I 3 EDO A 1 7 7 EDO EDO . 
J 3 EDO A 1 8 8 EDO EDO . 
K 3 EDO A 1 9 9 EDO EDO . 
L 3 EDO A 1 10 10 EDO EDO . 
M 3 EDO A 1 11 11 EDO EDO . 
N 4 CL A 1 453 1 CL CL . 
O 5 OGA A 1 454 1 OGA OGA . 
P 6 HOH A 1 12 12 HOH HOH . 
P 6 HOH A 2 13 13 HOH HOH . 
P 6 HOH A 3 14 14 HOH HOH . 
P 6 HOH A 4 15 15 HOH HOH . 
P 6 HOH A 5 16 16 HOH HOH . 
P 6 HOH A 6 17 17 HOH HOH . 
P 6 HOH A 7 18 18 HOH HOH . 
P 6 HOH A 8 19 19 HOH HOH . 
P 6 HOH A 9 20 20 HOH HOH . 
P 6 HOH A 10 21 21 HOH HOH . 
P 6 HOH A 11 22 22 HOH HOH . 
P 6 HOH A 12 23 23 HOH HOH . 
P 6 HOH A 13 24 24 HOH HOH . 
P 6 HOH A 14 25 25 HOH HOH . 
P 6 HOH A 15 29 29 HOH HOH . 
P 6 HOH A 16 30 30 HOH HOH . 
P 6 HOH A 17 31 31 HOH HOH . 
P 6 HOH A 18 33 33 HOH HOH . 
P 6 HOH A 19 34 34 HOH HOH . 
P 6 HOH A 20 35 35 HOH HOH . 
P 6 HOH A 21 37 37 HOH HOH . 
P 6 HOH A 22 38 38 HOH HOH . 
P 6 HOH A 23 39 39 HOH HOH . 
P 6 HOH A 24 40 40 HOH HOH . 
P 6 HOH A 25 41 41 HOH HOH . 
P 6 HOH A 26 42 42 HOH HOH . 
P 6 HOH A 27 43 43 HOH HOH . 
P 6 HOH A 28 44 44 HOH HOH . 
P 6 HOH A 29 45 45 HOH HOH . 
P 6 HOH A 30 46 46 HOH HOH . 
P 6 HOH A 31 47 47 HOH HOH . 
P 6 HOH A 32 48 48 HOH HOH . 
P 6 HOH A 33 49 49 HOH HOH . 
P 6 HOH A 34 50 50 HOH HOH . 
P 6 HOH A 35 51 51 HOH HOH . 
P 6 HOH A 36 53 53 HOH HOH . 
P 6 HOH A 37 54 54 HOH HOH . 
P 6 HOH A 38 55 55 HOH HOH . 
P 6 HOH A 39 56 56 HOH HOH . 
P 6 HOH A 40 57 57 HOH HOH . 
P 6 HOH A 41 58 58 HOH HOH . 
P 6 HOH A 42 59 59 HOH HOH . 
P 6 HOH A 43 455 2 HOH HOH . 
P 6 HOH A 44 456 3 HOH HOH . 
P 6 HOH A 45 457 4 HOH HOH . 
P 6 HOH A 46 458 5 HOH HOH . 
P 6 HOH A 47 459 6 HOH HOH . 
P 6 HOH A 48 460 8 HOH HOH . 
P 6 HOH A 49 461 9 HOH HOH . 
P 6 HOH A 50 462 10 HOH HOH . 
P 6 HOH A 51 463 11 HOH HOH . 
P 6 HOH A 52 464 60 HOH HOH . 
P 6 HOH A 53 465 61 HOH HOH . 
P 6 HOH A 54 466 62 HOH HOH . 
P 6 HOH A 55 467 63 HOH HOH . 
P 6 HOH A 56 468 64 HOH HOH . 
P 6 HOH A 57 469 65 HOH HOH . 
P 6 HOH A 58 470 66 HOH HOH . 
P 6 HOH A 59 471 68 HOH HOH . 
P 6 HOH A 60 472 69 HOH HOH . 
P 6 HOH A 61 473 70 HOH HOH . 
P 6 HOH A 62 474 71 HOH HOH . 
P 6 HOH A 63 475 72 HOH HOH . 
P 6 HOH A 64 476 73 HOH HOH . 
P 6 HOH A 65 477 74 HOH HOH . 
P 6 HOH A 66 478 75 HOH HOH . 
P 6 HOH A 67 479 76 HOH HOH . 
P 6 HOH A 68 480 77 HOH HOH . 
P 6 HOH A 69 481 78 HOH HOH . 
P 6 HOH A 70 482 79 HOH HOH . 
P 6 HOH A 71 483 80 HOH HOH . 
P 6 HOH A 72 484 81 HOH HOH . 
P 6 HOH A 73 485 82 HOH HOH . 
P 6 HOH A 74 486 83 HOH HOH . 
P 6 HOH A 75 487 84 HOH HOH . 
P 6 HOH A 76 488 85 HOH HOH . 
P 6 HOH A 77 489 86 HOH HOH . 
P 6 HOH A 78 490 87 HOH HOH . 
P 6 HOH A 79 491 88 HOH HOH . 
P 6 HOH A 80 492 89 HOH HOH . 
P 6 HOH A 81 493 90 HOH HOH . 
P 6 HOH A 82 494 91 HOH HOH . 
P 6 HOH A 83 495 92 HOH HOH . 
P 6 HOH A 84 496 93 HOH HOH . 
P 6 HOH A 85 497 94 HOH HOH . 
P 6 HOH A 86 498 95 HOH HOH . 
P 6 HOH A 87 499 96 HOH HOH . 
P 6 HOH A 88 500 97 HOH HOH . 
P 6 HOH A 89 501 98 HOH HOH . 
P 6 HOH A 90 502 99 HOH HOH . 
P 6 HOH A 91 503 100 HOH HOH . 
P 6 HOH A 92 504 101 HOH HOH . 
P 6 HOH A 93 505 102 HOH HOH . 
P 6 HOH A 94 506 103 HOH HOH . 
P 6 HOH A 95 507 104 HOH HOH . 
P 6 HOH A 96 508 105 HOH HOH . 
P 6 HOH A 97 509 106 HOH HOH . 
P 6 HOH A 98 510 107 HOH HOH . 
P 6 HOH A 99 511 108 HOH HOH . 
P 6 HOH A 100 512 109 HOH HOH . 
P 6 HOH A 101 513 110 HOH HOH . 
P 6 HOH A 102 514 111 HOH HOH . 
P 6 HOH A 103 515 112 HOH HOH . 
P 6 HOH A 104 516 113 HOH HOH . 
P 6 HOH A 105 517 114 HOH HOH . 
P 6 HOH A 106 518 115 HOH HOH . 
P 6 HOH A 107 519 116 HOH HOH . 
P 6 HOH A 108 520 117 HOH HOH . 
P 6 HOH A 109 521 118 HOH HOH . 
P 6 HOH A 110 522 119 HOH HOH . 
P 6 HOH A 111 523 120 HOH HOH . 
P 6 HOH A 112 524 121 HOH HOH . 
P 6 HOH A 113 525 122 HOH HOH . 
P 6 HOH A 114 526 123 HOH HOH . 
P 6 HOH A 115 527 124 HOH HOH . 
P 6 HOH A 116 528 125 HOH HOH . 
P 6 HOH A 117 529 126 HOH HOH . 
P 6 HOH A 118 530 127 HOH HOH . 
P 6 HOH A 119 531 128 HOH HOH . 
P 6 HOH A 120 532 129 HOH HOH . 
P 6 HOH A 121 533 130 HOH HOH . 
P 6 HOH A 122 534 131 HOH HOH . 
P 6 HOH A 123 535 132 HOH HOH . 
P 6 HOH A 124 536 133 HOH HOH . 
P 6 HOH A 125 537 134 HOH HOH . 
P 6 HOH A 126 538 135 HOH HOH . 
P 6 HOH A 127 539 136 HOH HOH . 
P 6 HOH A 128 540 137 HOH HOH . 
P 6 HOH A 129 541 138 HOH HOH . 
P 6 HOH A 130 542 139 HOH HOH . 
P 6 HOH A 131 543 140 HOH HOH . 
P 6 HOH A 132 544 141 HOH HOH . 
P 6 HOH A 133 545 142 HOH HOH . 
P 6 HOH A 134 546 143 HOH HOH . 
P 6 HOH A 135 547 144 HOH HOH . 
P 6 HOH A 136 548 145 HOH HOH . 
P 6 HOH A 137 549 146 HOH HOH . 
P 6 HOH A 138 550 147 HOH HOH . 
P 6 HOH A 139 551 148 HOH HOH . 
P 6 HOH A 140 552 150 HOH HOH . 
P 6 HOH A 141 553 151 HOH HOH . 
P 6 HOH A 142 554 152 HOH HOH . 
P 6 HOH A 143 555 153 HOH HOH . 
P 6 HOH A 144 556 154 HOH HOH . 
P 6 HOH A 145 557 155 HOH HOH . 
P 6 HOH A 146 558 156 HOH HOH . 
P 6 HOH A 147 559 158 HOH HOH . 
P 6 HOH A 148 560 159 HOH HOH . 
P 6 HOH A 149 561 161 HOH HOH . 
P 6 HOH A 150 562 162 HOH HOH . 
P 6 HOH A 151 563 163 HOH HOH . 
P 6 HOH A 152 564 164 HOH HOH . 
P 6 HOH A 153 565 165 HOH HOH . 
P 6 HOH A 154 566 166 HOH HOH . 
P 6 HOH A 155 567 167 HOH HOH . 
P 6 HOH A 156 568 169 HOH HOH . 
P 6 HOH A 157 569 170 HOH HOH . 
P 6 HOH A 158 570 171 HOH HOH . 
P 6 HOH A 159 571 172 HOH HOH . 
P 6 HOH A 160 572 173 HOH HOH . 
P 6 HOH A 161 573 174 HOH HOH . 
P 6 HOH A 162 574 175 HOH HOH . 
P 6 HOH A 163 575 176 HOH HOH . 
P 6 HOH A 164 576 177 HOH HOH . 
P 6 HOH A 165 577 178 HOH HOH . 
P 6 HOH A 166 578 179 HOH HOH . 
P 6 HOH A 167 579 180 HOH HOH . 
P 6 HOH A 168 580 181 HOH HOH . 
P 6 HOH A 169 581 184 HOH HOH . 
P 6 HOH A 170 582 185 HOH HOH . 
P 6 HOH A 171 583 186 HOH HOH . 
P 6 HOH A 172 584 187 HOH HOH . 
P 6 HOH A 173 585 188 HOH HOH . 
P 6 HOH A 174 586 189 HOH HOH . 
P 6 HOH A 175 587 190 HOH HOH . 
P 6 HOH A 176 588 191 HOH HOH . 
P 6 HOH A 177 589 192 HOH HOH . 
P 6 HOH A 178 590 193 HOH HOH . 
P 6 HOH A 179 591 194 HOH HOH . 
P 6 HOH A 180 592 195 HOH HOH . 
P 6 HOH A 181 593 196 HOH HOH . 
P 6 HOH A 182 594 197 HOH HOH . 
P 6 HOH A 183 595 198 HOH HOH . 
P 6 HOH A 184 596 199 HOH HOH . 
P 6 HOH A 185 597 200 HOH HOH . 
P 6 HOH A 186 598 201 HOH HOH . 
P 6 HOH A 187 599 204 HOH HOH . 
P 6 HOH A 188 600 205 HOH HOH . 
P 6 HOH A 189 601 206 HOH HOH . 
P 6 HOH A 190 602 207 HOH HOH . 
P 6 HOH A 191 603 208 HOH HOH . 
P 6 HOH A 192 604 209 HOH HOH . 
P 6 HOH A 193 605 210 HOH HOH . 
P 6 HOH A 194 606 211 HOH HOH . 
P 6 HOH A 195 607 212 HOH HOH . 
P 6 HOH A 196 608 213 HOH HOH . 
P 6 HOH A 197 609 214 HOH HOH . 
P 6 HOH A 198 610 215 HOH HOH . 
P 6 HOH A 199 611 216 HOH HOH . 
P 6 HOH A 200 612 218 HOH HOH . 
P 6 HOH A 201 613 219 HOH HOH . 
P 6 HOH A 202 614 220 HOH HOH . 
P 6 HOH A 203 615 221 HOH HOH . 
P 6 HOH A 204 616 222 HOH HOH . 
P 6 HOH A 205 617 223 HOH HOH . 
P 6 HOH A 206 618 224 HOH HOH . 
P 6 HOH A 207 619 225 HOH HOH . 
P 6 HOH A 208 620 226 HOH HOH . 
P 6 HOH A 209 621 227 HOH HOH . 
P 6 HOH A 210 622 228 HOH HOH . 
P 6 HOH A 211 623 229 HOH HOH . 
P 6 HOH A 212 624 230 HOH HOH . 
P 6 HOH A 213 625 231 HOH HOH . 
P 6 HOH A 214 626 232 HOH HOH . 
P 6 HOH A 215 627 233 HOH HOH . 
P 6 HOH A 216 628 234 HOH HOH . 
P 6 HOH A 217 629 235 HOH HOH . 
P 6 HOH A 218 630 236 HOH HOH . 
P 6 HOH A 219 631 237 HOH HOH . 
P 6 HOH A 220 632 238 HOH HOH . 
P 6 HOH A 221 633 239 HOH HOH . 
P 6 HOH A 222 634 241 HOH HOH . 
P 6 HOH A 223 635 242 HOH HOH . 
P 6 HOH A 224 636 243 HOH HOH . 
P 6 HOH A 225 637 244 HOH HOH . 
P 6 HOH A 226 638 245 HOH HOH . 
P 6 HOH A 227 639 246 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . M 3 35.611 34.639 21.47 1 46.75 ? C1 EDO 11 A 1 
HETATM 2 O O1 EDO . . . M 3 34.907 35.783 20.973 1 41.37 ? O1 EDO 11 A 1 
HETATM 3 C C2 EDO . . . M 3 36.447 34.01 20.361 1 53.24 ? C2 EDO 11 A 1 
HETATM 4 O O2 EDO . . . M 3 37.556 34.854 20.038 1 56.64 ? O2 EDO 11 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#