data_3PWS # _model_server_result.job_id AJXU3ODh3qbFW9hYnWHDxQ _model_server_result.datetime_utc '2024-10-12 10:23:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":367}' # _entry.id 3PWS # _exptl.entry_id 3PWS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 161.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-aminohexanedioic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.14 _cell.angle_gamma 90 _cell.entry_id 3PWS _cell.length_a 60.082 _cell.length_b 99.404 _cell.length_c 64.612 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 274 A ALA 274 1_555 D NA NA . A NA 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc2 A O PHE 276 A PHE 276 1_555 D NA NA . A NA 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc3 A O ALA 279 A ALA 279 1_555 D NA NA . A NA 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? # _chem_comp.formula 'C6 H11 N O4' _chem_comp.formula_weight 161.156 _chem_comp.id 11C _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-aminohexanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms D-2-aminoadipate # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA C 11C sing 1 n n O C 11C doub 2 n n C OXT 11C sing 3 n n N CA 11C sing 4 n n N HN 11C sing 5 n n N HNA 11C sing 6 n n CB CA 11C sing 7 n n CA HA 11C sing 8 n n CAF CB 11C sing 9 n n CB HB 11C sing 10 n n CB HBA 11C sing 11 n n CAI OAB 11C sing 12 n n OAB HOAB 11C sing 13 n n OAD CAI 11C doub 14 n n CAF CAG 11C sing 15 n n CAF HAF 11C sing 16 n n CAF HAFA 11C sing 17 n n CAI CAG 11C sing 18 n n CAG HAG 11C sing 19 n n CAG HAGA 11C sing 20 n n OXT HOXT 11C sing 21 n n # _atom_sites.entry_id 3PWS _atom_sites.fract_transf_matrix[1][1] 0.016644 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003277 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 11C A 1 367 2 11C 11C . D 3 NA A 1 368 1 NA NA . E 4 A2P A 1 369 1 A2P A2P . F 2 11C B 1 367 1 11C 11C . G 4 A2P B 1 368 2 A2P A2P . H 5 HOH A 1 370 4 HOH HOH . H 5 HOH A 2 371 5 HOH HOH . H 5 HOH A 3 372 6 HOH HOH . H 5 HOH A 4 373 10 HOH HOH . H 5 HOH A 5 374 12 HOH HOH . H 5 HOH A 6 375 13 HOH HOH . H 5 HOH A 7 376 14 HOH HOH . H 5 HOH A 8 377 16 HOH HOH . H 5 HOH A 9 378 18 HOH HOH . H 5 HOH A 10 379 20 HOH HOH . H 5 HOH A 11 380 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C 11C . . . C 2 2.207 24.832 44.807 1 29.09 ? C 11C 367 A 1 HETATM 2 N N 11C . . . C 2 0.981 26.499 46.056 1 29.24 ? N 11C 367 A 1 HETATM 3 O O 11C . . . C 2 3.207 25.561 45.003 1 29.01 ? O 11C 367 A 1 HETATM 4 C CA 11C . . . C 2 0.925 25.15 45.521 1 29.12 ? CA 11C 367 A 1 HETATM 5 C CB 11C . . . C 2 0.726 24.124 46.637 1 29.26 ? CB 11C 367 A 1 HETATM 6 O OAB 11C . . . C 2 -3.623 25.732 47.188 1 29.98 ? OAB 11C 367 A 1 HETATM 7 O OAD 11C . . . C 2 -2.739 25.015 49.072 1 29.89 ? OAD 11C 367 A 1 HETATM 8 C CAF 11C . . . C 2 -0.383 24.473 47.623 1 29.42 ? CAF 11C 367 A 1 HETATM 9 C CAG 11C . . . C 2 -1.773 24.248 47.036 1 30.01 ? CAG 11C 367 A 1 HETATM 10 C CAI 11C . . . C 2 -2.784 25.053 47.821 1 30.3 ? CAI 11C 367 A 1 HETATM 11 O OXT 11C . . . C 2 2.225 23.842 44.044 1 28.96 ? OXT 11C 367 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #