data_3PX7 # _model_server_result.job_id LLSJYE4TdxvpxZrUNsdfEQ _model_server_result.datetime_utc '2025-03-06 07:56:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3px7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":596}' # _entry.id 3PX7 # _exptl.entry_id 3PX7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PX7 _cell.length_a 61.602 _cell.length_b 91.759 _cell.length_c 141.976 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PX7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 318 A THR 318 1_555 A N PTR 319 A PTR 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.366 ? covale ? covale2 A C PTR 319 A PTR 319 1_555 A N MET 320 A MET 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale3 A O3P PTR 319 A PTR 319 1_555 B C5' DT 1 B DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.677 ? metalc ? metalc1 A O GLY 281 A GLY 281 1_555 D HG HG . A HG 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.103 ? metalc ? metalc2 A SG CYS 401 A CYS 401 1_555 D HG HG . A HG 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc3 A O CYS 401 A CYS 401 1_555 D HG HG . A HG 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? metalc ? metalc4 B N3 DT 1 B DT 1 1_555 E HG HG . B HG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc5 B O4 DT 2 B DT 2 1_555 E HG HG . B HG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc6 E HG HG . B HG 6 1_555 C O4 DT 8 C DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.176 ? metalc ? metalc7 C N3 DT 8 C DT 8 1_555 F HG HG . C HG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc8 C O4 DT 8 C DT 8 1_555 F HG HG . C HG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.181 ? hydrog TYPE_28_PAIR hydrog1 C N3 DT 3 C DT 3 1_555 C O6 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog2 C O2 DT 3 C DT 3 1_555 C N1 DG 4 C DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PX7 _atom_sites.fract_transf_matrix[1][1] 0.016233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007043 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HG A 1 596 596 HG HG . E 4 HG B 1 6 6 HG HG . F 4 HG C 1 9 9 HG HG . G 5 HOH A 1 597 597 HOH HOH . G 5 HOH A 2 598 598 HOH HOH . G 5 HOH A 3 599 599 HOH HOH . G 5 HOH A 4 600 600 HOH HOH . G 5 HOH A 5 601 601 HOH HOH . G 5 HOH A 6 602 602 HOH HOH . G 5 HOH A 7 603 603 HOH HOH . G 5 HOH A 8 604 604 HOH HOH . G 5 HOH A 9 605 605 HOH HOH . G 5 HOH A 10 606 606 HOH HOH . G 5 HOH A 11 607 607 HOH HOH . G 5 HOH A 12 608 608 HOH HOH . G 5 HOH A 13 609 609 HOH HOH . G 5 HOH A 14 610 610 HOH HOH . G 5 HOH A 15 611 611 HOH HOH . G 5 HOH A 16 612 612 HOH HOH . G 5 HOH A 17 613 613 HOH HOH . G 5 HOH A 18 614 614 HOH HOH . G 5 HOH A 19 615 615 HOH HOH . G 5 HOH A 20 616 616 HOH HOH . G 5 HOH A 21 617 617 HOH HOH . G 5 HOH A 22 618 618 HOH HOH . G 5 HOH A 23 619 619 HOH HOH . G 5 HOH A 24 620 620 HOH HOH . G 5 HOH A 25 621 621 HOH HOH . G 5 HOH A 26 622 622 HOH HOH . G 5 HOH A 27 623 623 HOH HOH . G 5 HOH A 28 624 624 HOH HOH . G 5 HOH A 29 625 625 HOH HOH . G 5 HOH A 30 626 626 HOH HOH . G 5 HOH A 31 627 627 HOH HOH . G 5 HOH A 32 628 628 HOH HOH . G 5 HOH A 33 629 629 HOH HOH . G 5 HOH A 34 630 630 HOH HOH . G 5 HOH A 35 631 631 HOH HOH . G 5 HOH A 36 632 632 HOH HOH . G 5 HOH A 37 633 633 HOH HOH . G 5 HOH A 38 634 634 HOH HOH . G 5 HOH A 39 635 635 HOH HOH . G 5 HOH A 40 636 636 HOH HOH . G 5 HOH A 41 637 637 HOH HOH . G 5 HOH A 42 638 638 HOH HOH . G 5 HOH A 43 639 639 HOH HOH . G 5 HOH A 44 640 640 HOH HOH . G 5 HOH A 45 641 641 HOH HOH . G 5 HOH A 46 642 642 HOH HOH . G 5 HOH A 47 643 643 HOH HOH . G 5 HOH A 48 644 644 HOH HOH . G 5 HOH A 49 645 645 HOH HOH . G 5 HOH A 50 646 646 HOH HOH . G 5 HOH A 51 647 647 HOH HOH . G 5 HOH A 52 648 648 HOH HOH . G 5 HOH A 53 649 649 HOH HOH . G 5 HOH A 54 650 650 HOH HOH . G 5 HOH A 55 651 651 HOH HOH . G 5 HOH A 56 652 652 HOH HOH . G 5 HOH A 57 653 653 HOH HOH . G 5 HOH A 58 654 654 HOH HOH . G 5 HOH A 59 655 655 HOH HOH . G 5 HOH A 60 656 656 HOH HOH . G 5 HOH A 61 657 657 HOH HOH . G 5 HOH A 62 658 658 HOH HOH . G 5 HOH A 63 659 659 HOH HOH . G 5 HOH A 64 660 660 HOH HOH . G 5 HOH A 65 661 661 HOH HOH . G 5 HOH A 66 662 662 HOH HOH . G 5 HOH A 67 663 663 HOH HOH . G 5 HOH A 68 664 664 HOH HOH . G 5 HOH A 69 665 665 HOH HOH . G 5 HOH A 70 666 666 HOH HOH . G 5 HOH A 71 667 667 HOH HOH . G 5 HOH A 72 668 668 HOH HOH . G 5 HOH A 73 669 669 HOH HOH . G 5 HOH A 74 670 670 HOH HOH . G 5 HOH A 75 671 671 HOH HOH . G 5 HOH A 76 672 672 HOH HOH . G 5 HOH A 77 673 673 HOH HOH . G 5 HOH A 78 674 674 HOH HOH . G 5 HOH A 79 675 675 HOH HOH . G 5 HOH A 80 676 676 HOH HOH . G 5 HOH A 81 677 677 HOH HOH . G 5 HOH A 82 678 678 HOH HOH . G 5 HOH A 83 679 679 HOH HOH . G 5 HOH A 84 680 680 HOH HOH . G 5 HOH A 85 681 681 HOH HOH . G 5 HOH A 86 682 682 HOH HOH . G 5 HOH A 87 683 683 HOH HOH . G 5 HOH A 88 684 684 HOH HOH . G 5 HOH A 89 685 685 HOH HOH . G 5 HOH A 90 686 686 HOH HOH . G 5 HOH A 91 687 687 HOH HOH . G 5 HOH A 92 688 688 HOH HOH . G 5 HOH A 93 689 689 HOH HOH . G 5 HOH A 94 690 690 HOH HOH . G 5 HOH A 95 691 691 HOH HOH . G 5 HOH A 96 692 692 HOH HOH . G 5 HOH A 97 693 693 HOH HOH . G 5 HOH A 98 694 694 HOH HOH . G 5 HOH A 99 695 695 HOH HOH . G 5 HOH A 100 696 696 HOH HOH . G 5 HOH A 101 697 697 HOH HOH . G 5 HOH A 102 698 698 HOH HOH . G 5 HOH A 103 699 699 HOH HOH . G 5 HOH A 104 700 700 HOH HOH . G 5 HOH A 105 701 701 HOH HOH . G 5 HOH A 106 702 702 HOH HOH . G 5 HOH A 107 703 703 HOH HOH . G 5 HOH A 108 704 704 HOH HOH . G 5 HOH A 109 705 705 HOH HOH . G 5 HOH A 110 706 706 HOH HOH . G 5 HOH A 111 707 707 HOH HOH . G 5 HOH A 112 708 708 HOH HOH . G 5 HOH A 113 709 709 HOH HOH . G 5 HOH A 114 710 710 HOH HOH . G 5 HOH A 115 711 711 HOH HOH . G 5 HOH A 116 712 712 HOH HOH . G 5 HOH A 117 713 713 HOH HOH . G 5 HOH A 118 714 714 HOH HOH . G 5 HOH A 119 715 715 HOH HOH . G 5 HOH A 120 716 716 HOH HOH . G 5 HOH A 121 717 717 HOH HOH . G 5 HOH A 122 718 718 HOH HOH . G 5 HOH A 123 719 719 HOH HOH . G 5 HOH A 124 720 720 HOH HOH . G 5 HOH A 125 721 721 HOH HOH . G 5 HOH A 126 722 722 HOH HOH . G 5 HOH A 127 723 723 HOH HOH . G 5 HOH A 128 724 724 HOH HOH . G 5 HOH A 129 725 725 HOH HOH . G 5 HOH A 130 726 726 HOH HOH . G 5 HOH A 131 727 727 HOH HOH . G 5 HOH A 132 728 728 HOH HOH . G 5 HOH A 133 729 729 HOH HOH . H 5 HOH C 1 21 21 HOH HOH . H 5 HOH C 2 24 24 HOH HOH . H 5 HOH C 3 61 61 HOH HOH . H 5 HOH C 4 63 63 HOH HOH . H 5 HOH C 5 112 112 HOH HOH . H 5 HOH C 6 116 116 HOH HOH . H 5 HOH C 7 133 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -25.403 _atom_site.Cartn_y 14.386 _atom_site.Cartn_z 25.511 _atom_site.occupancy 0.7 _atom_site.B_iso_or_equiv 34.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 596 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #