data_3PXR # _model_server_result.job_id cYbAs1zg6yOOucj-NW8OHw _model_server_result.datetime_utc '2024-11-05 23:17:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":299}' # _entry.id 3PXR # _exptl.entry_id 3PXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PXR _cell.length_a 53.53 _cell.length_b 72.1 _cell.length_c 71.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3PXR _atom_sites.fract_transf_matrix[1][1] 0.018681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013916 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 299 1 EDO EDO . C 3 HOH A 1 300 1 HOH WAT . C 3 HOH A 2 301 2 HOH WAT . C 3 HOH A 3 302 3 HOH WAT . C 3 HOH A 4 303 4 HOH WAT . C 3 HOH A 5 304 5 HOH WAT . C 3 HOH A 6 305 6 HOH WAT . C 3 HOH A 7 306 7 HOH WAT . C 3 HOH A 8 307 8 HOH WAT . C 3 HOH A 9 308 9 HOH WAT . C 3 HOH A 10 309 10 HOH WAT . C 3 HOH A 11 310 11 HOH WAT . C 3 HOH A 12 311 12 HOH WAT . C 3 HOH A 13 312 13 HOH WAT . C 3 HOH A 14 313 14 HOH WAT . C 3 HOH A 15 314 15 HOH WAT . C 3 HOH A 16 315 16 HOH WAT . C 3 HOH A 17 316 17 HOH WAT . C 3 HOH A 18 317 18 HOH WAT . C 3 HOH A 19 318 19 HOH WAT . C 3 HOH A 20 319 20 HOH WAT . C 3 HOH A 21 320 21 HOH WAT . C 3 HOH A 22 321 22 HOH WAT . C 3 HOH A 23 322 23 HOH WAT . C 3 HOH A 24 323 24 HOH WAT . C 3 HOH A 25 324 25 HOH WAT . C 3 HOH A 26 325 26 HOH WAT . C 3 HOH A 27 326 27 HOH WAT . C 3 HOH A 28 327 28 HOH WAT . C 3 HOH A 29 328 29 HOH WAT . C 3 HOH A 30 329 30 HOH WAT . C 3 HOH A 31 330 31 HOH WAT . C 3 HOH A 32 331 32 HOH WAT . C 3 HOH A 33 332 33 HOH WAT . C 3 HOH A 34 333 35 HOH WAT . C 3 HOH A 35 334 36 HOH WAT . C 3 HOH A 36 335 37 HOH WAT . C 3 HOH A 37 336 38 HOH WAT . C 3 HOH A 38 337 39 HOH WAT . C 3 HOH A 39 338 40 HOH WAT . C 3 HOH A 40 339 41 HOH WAT . C 3 HOH A 41 340 42 HOH WAT . C 3 HOH A 42 341 43 HOH WAT . C 3 HOH A 43 342 44 HOH WAT . C 3 HOH A 44 343 45 HOH WAT . C 3 HOH A 45 344 46 HOH WAT . C 3 HOH A 46 345 47 HOH WAT . C 3 HOH A 47 346 48 HOH WAT . C 3 HOH A 48 347 49 HOH WAT . C 3 HOH A 49 348 50 HOH WAT . C 3 HOH A 50 349 51 HOH WAT . C 3 HOH A 51 350 52 HOH WAT . C 3 HOH A 52 351 53 HOH WAT . C 3 HOH A 53 352 54 HOH WAT . C 3 HOH A 54 353 55 HOH WAT . C 3 HOH A 55 354 56 HOH WAT . C 3 HOH A 56 355 57 HOH WAT . C 3 HOH A 57 356 58 HOH WAT . C 3 HOH A 58 357 59 HOH WAT . C 3 HOH A 59 358 60 HOH WAT . C 3 HOH A 60 359 61 HOH WAT . C 3 HOH A 61 360 62 HOH WAT . C 3 HOH A 62 361 63 HOH WAT . C 3 HOH A 63 362 64 HOH WAT . C 3 HOH A 64 363 65 HOH WAT . C 3 HOH A 65 364 66 HOH WAT . C 3 HOH A 66 365 67 HOH WAT . C 3 HOH A 67 366 68 HOH WAT . C 3 HOH A 68 367 69 HOH WAT . C 3 HOH A 69 368 70 HOH WAT . C 3 HOH A 70 369 71 HOH WAT . C 3 HOH A 71 370 72 HOH WAT . C 3 HOH A 72 371 73 HOH WAT . C 3 HOH A 73 372 74 HOH WAT . C 3 HOH A 74 373 75 HOH WAT . C 3 HOH A 75 374 76 HOH WAT . C 3 HOH A 76 375 77 HOH WAT . C 3 HOH A 77 376 79 HOH WAT . C 3 HOH A 78 377 81 HOH WAT . C 3 HOH A 79 378 82 HOH WAT . C 3 HOH A 80 379 83 HOH WAT . C 3 HOH A 81 380 84 HOH WAT . C 3 HOH A 82 381 85 HOH WAT . C 3 HOH A 83 382 86 HOH WAT . C 3 HOH A 84 383 87 HOH WAT . C 3 HOH A 85 384 88 HOH WAT . C 3 HOH A 86 385 89 HOH WAT . C 3 HOH A 87 386 90 HOH WAT . C 3 HOH A 88 388 92 HOH WAT . C 3 HOH A 89 389 93 HOH WAT . C 3 HOH A 90 390 94 HOH WAT . C 3 HOH A 91 391 95 HOH WAT . C 3 HOH A 92 393 97 HOH WAT . C 3 HOH A 93 394 98 HOH WAT . C 3 HOH A 94 395 99 HOH WAT . C 3 HOH A 95 396 100 HOH WAT . C 3 HOH A 96 397 101 HOH WAT . C 3 HOH A 97 398 102 HOH WAT . C 3 HOH A 98 399 103 HOH WAT . C 3 HOH A 99 400 104 HOH WAT . C 3 HOH A 100 401 105 HOH WAT . C 3 HOH A 101 402 106 HOH WAT . C 3 HOH A 102 403 107 HOH WAT . C 3 HOH A 103 404 108 HOH WAT . C 3 HOH A 104 405 109 HOH WAT . C 3 HOH A 105 406 110 HOH WAT . C 3 HOH A 106 407 111 HOH WAT . C 3 HOH A 107 408 112 HOH WAT . C 3 HOH A 108 409 113 HOH WAT . C 3 HOH A 109 410 114 HOH WAT . C 3 HOH A 110 411 115 HOH WAT . C 3 HOH A 111 412 116 HOH WAT . C 3 HOH A 112 413 117 HOH WAT . C 3 HOH A 113 415 119 HOH WAT . C 3 HOH A 114 416 120 HOH WAT . C 3 HOH A 115 418 122 HOH WAT . C 3 HOH A 116 419 123 HOH WAT . C 3 HOH A 117 420 124 HOH WAT . C 3 HOH A 118 421 125 HOH WAT . C 3 HOH A 119 422 126 HOH WAT . C 3 HOH A 120 423 127 HOH WAT . C 3 HOH A 121 424 128 HOH WAT . C 3 HOH A 122 425 129 HOH WAT . C 3 HOH A 123 426 130 HOH WAT . C 3 HOH A 124 427 131 HOH WAT . C 3 HOH A 125 428 132 HOH WAT . C 3 HOH A 126 429 133 HOH WAT . C 3 HOH A 127 430 134 HOH WAT . C 3 HOH A 128 433 137 HOH WAT . C 3 HOH A 129 434 138 HOH WAT . C 3 HOH A 130 435 139 HOH WAT . C 3 HOH A 131 436 140 HOH WAT . C 3 HOH A 132 438 142 HOH WAT . C 3 HOH A 133 439 143 HOH WAT . C 3 HOH A 134 440 144 HOH WAT . C 3 HOH A 135 441 145 HOH WAT . C 3 HOH A 136 442 146 HOH WAT . C 3 HOH A 137 444 148 HOH WAT . C 3 HOH A 138 445 149 HOH WAT . C 3 HOH A 139 446 150 HOH WAT . C 3 HOH A 140 447 152 HOH WAT . C 3 HOH A 141 448 153 HOH WAT . C 3 HOH A 142 449 154 HOH WAT . C 3 HOH A 143 450 155 HOH WAT . C 3 HOH A 144 451 156 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 50.883 -13.928 122.382 1 24.99 ? C1 EDO 299 A 1 HETATM 2 O O1 EDO . . . B 2 50.523 -14.505 123.641 1 23.6 ? O1 EDO 299 A 1 HETATM 3 C C2 EDO . . . B 2 50.481 -14.872 121.248 1 25.49 ? C2 EDO 299 A 1 HETATM 4 O O2 EDO . . . B 2 49.06 -14.805 121.052 1 26.93 ? O2 EDO 299 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #