data_3Q0C
#
_model_server_result.job_id            5FLefzMOh0O7CHlvogPQnw 
_model_server_result.datetime_utc      '2024-11-22 13:08:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q0c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":12}' 
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_entry.id    3Q0C 
#
_exptl.entry_id    3Q0C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3Q0C 
_cell.length_a            104.462 
_cell.length_b            104.462 
_cell.length_c            176.691 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q0C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C O3' DA 4 C DA 4 1_555 C P 5CM 5 C 5CM 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.593 ? 
covale ? covale2 C O3' 5CM 5 C 5CM 5 1_555 C P DG 6 C DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.608 ? 
covale ? covale3 D O3' DA 4 B DA 4 1_555 D P 5CM 5 B 5CM 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? 
covale ? covale4 D O3' 5CM 5 B 5CM 5 1_555 D P DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? 
metalc ? metalc1 D OP1 DT 11 B DT 11 1_555 E MG MG . B MG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? 
metalc ? metalc2 D OP2 DT 11 B DT 11 1_555 E MG MG . B MG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? 
metalc ? metalc3 E MG MG . B MG 12 1_555 I O HOH . B HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc4 E MG MG . B MG 12 1_555 I O HOH . B HOH 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
hydrog WATSON-CRICK hydrog1 C N1 DA 1 C DA 1 1_555 D N3 DT 10 B DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 C N6 DA 1 C DA 1 1_555 D O4 DT 10 B DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 C N3 DC 2 C DC 2 1_555 D N1 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 C N4 DC 2 C DC 2 1_555 D O6 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 C O2 DC 2 C DC 2 1_555 D N2 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 C N3 DT 3 C DT 3 1_555 D N1 DA 8 B DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 C O4 DT 3 C DT 3 1_555 D N6 DA 8 B DA 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 C N1 DA 4 C DA 4 1_555 D N3 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 C N6 DA 4 C DA 4 1_555 D O4 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 C N3 DT 7 C DT 7 1_555 D N1 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 C O4 DT 7 C DT 7 1_555 D N6 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 C N1 DA 8 C DA 8 1_555 D N3 DT 3 B DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 C N6 DA 8 C DA 8 1_555 D O4 DT 3 B DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 C N1 DG 9 C DG 9 1_555 D N3 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 C N2 DG 9 C DG 9 1_555 D O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 C O6 DG 9 C DG 9 1_555 D N4 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 C N3 DT 10 C DT 10 1_555 D N1 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 C O4 DT 10 C DT 10 1_555 D N6 DA 1 B DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3Q0C 
_atom_sites.fract_transf_matrix[1][1]    0.009573 
_atom_sites.fract_transf_matrix[1][2]    0.005527 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011054 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00566 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG B 1 12 1 MG MG . 
F 4 HOH X 1 2 2 HOH HOH . 
F 4 HOH X 2 5 5 HOH HOH . 
F 4 HOH X 3 6 6 HOH HOH . 
F 4 HOH X 4 7 7 HOH HOH . 
F 4 HOH X 5 8 8 HOH HOH . 
F 4 HOH X 6 10 10 HOH HOH . 
F 4 HOH X 7 11 11 HOH HOH . 
F 4 HOH X 8 12 12 HOH HOH . 
F 4 HOH X 9 15 15 HOH HOH . 
F 4 HOH X 10 17 17 HOH HOH . 
F 4 HOH X 11 18 18 HOH HOH . 
F 4 HOH X 12 20 20 HOH HOH . 
F 4 HOH X 13 21 21 HOH HOH . 
F 4 HOH X 14 22 22 HOH HOH . 
F 4 HOH X 15 23 23 HOH HOH . 
F 4 HOH X 16 26 26 HOH HOH . 
F 4 HOH X 17 28 28 HOH HOH . 
F 4 HOH X 18 34 34 HOH HOH . 
G 4 HOH A 1 4 4 HOH HOH . 
G 4 HOH A 2 9 9 HOH HOH . 
G 4 HOH A 3 13 13 HOH HOH . 
G 4 HOH A 4 14 14 HOH HOH . 
G 4 HOH A 5 19 19 HOH HOH . 
G 4 HOH A 6 24 24 HOH HOH . 
G 4 HOH A 7 25 25 HOH HOH . 
G 4 HOH A 8 29 29 HOH HOH . 
G 4 HOH A 9 30 30 HOH HOH . 
G 4 HOH A 10 31 31 HOH HOH . 
G 4 HOH A 11 35 35 HOH HOH . 
G 4 HOH A 12 36 36 HOH HOH . 
H 4 HOH C 1 12 1 HOH HOH . 
H 4 HOH C 2 13 3 HOH HOH . 
H 4 HOH C 3 27 27 HOH HOH . 
I 4 HOH B 1 16 16 HOH HOH . 
I 4 HOH B 2 32 32 HOH HOH . 
I 4 HOH B 3 33 33 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               51.168 
_atom_site.Cartn_y               -30.769 
_atom_site.Cartn_z               14.724 
_atom_site.occupancy             0.5 
_atom_site.B_iso_or_equiv        15.47 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           12 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           1 
#