data_3Q0W # _model_server_result.job_id AS1RWQVRV1IFZulZrdB8Gw _model_server_result.datetime_utc '2024-11-14 22:38:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":218}' # _entry.id 3Q0W # _exptl.entry_id 3Q0W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3Q0W _cell.length_a 119.82 _cell.length_b 119.82 _cell.length_c 33.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 119.82 119.82 16.795 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3Q0W _atom_sites.fract_transf_matrix[1][1] 0.008346 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008346 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LL5 A 1 217 217 LL5 LL5 . C 3 GOL A 1 218 218 GOL GOL . D 4 HOH A 1 219 219 HOH HOH . D 4 HOH A 2 220 220 HOH HOH . D 4 HOH A 3 221 221 HOH HOH . D 4 HOH A 4 222 222 HOH HOH . D 4 HOH A 5 223 223 HOH HOH . D 4 HOH A 6 224 224 HOH HOH . D 4 HOH A 7 225 225 HOH HOH . D 4 HOH A 8 226 226 HOH HOH . D 4 HOH A 9 227 227 HOH HOH . D 4 HOH A 10 228 228 HOH HOH . D 4 HOH A 11 229 229 HOH HOH . D 4 HOH A 12 230 230 HOH HOH . D 4 HOH A 13 231 231 HOH HOH . D 4 HOH A 14 232 232 HOH HOH . D 4 HOH A 15 233 233 HOH HOH . D 4 HOH A 16 234 234 HOH HOH . D 4 HOH A 17 235 235 HOH HOH . D 4 HOH A 18 236 236 HOH HOH . D 4 HOH A 19 237 237 HOH HOH . D 4 HOH A 20 238 238 HOH HOH . D 4 HOH A 21 239 239 HOH HOH . D 4 HOH A 22 240 240 HOH HOH . D 4 HOH A 23 241 241 HOH HOH . D 4 HOH A 24 242 242 HOH HOH . D 4 HOH A 25 243 243 HOH HOH . D 4 HOH A 26 244 244 HOH HOH . D 4 HOH A 27 245 245 HOH HOH . D 4 HOH A 28 246 246 HOH HOH . D 4 HOH A 29 247 247 HOH HOH . D 4 HOH A 30 248 248 HOH HOH . D 4 HOH A 31 249 249 HOH HOH . D 4 HOH A 32 250 250 HOH HOH . D 4 HOH A 33 251 251 HOH HOH . D 4 HOH A 34 252 252 HOH HOH . D 4 HOH A 35 253 253 HOH HOH . D 4 HOH A 36 254 254 HOH HOH . D 4 HOH A 37 255 255 HOH HOH . D 4 HOH A 38 256 256 HOH HOH . D 4 HOH A 39 257 257 HOH HOH . D 4 HOH A 40 258 258 HOH HOH . D 4 HOH A 41 259 259 HOH HOH . D 4 HOH A 42 260 260 HOH HOH . D 4 HOH A 43 261 261 HOH HOH . D 4 HOH A 44 262 262 HOH HOH . D 4 HOH A 45 263 263 HOH HOH . D 4 HOH A 46 264 264 HOH HOH . D 4 HOH A 47 265 265 HOH HOH . D 4 HOH A 48 266 266 HOH HOH . D 4 HOH A 49 267 267 HOH HOH . D 4 HOH A 50 268 268 HOH HOH . D 4 HOH A 51 269 269 HOH HOH . D 4 HOH A 52 270 270 HOH HOH . D 4 HOH A 53 271 271 HOH HOH . D 4 HOH A 54 272 272 HOH HOH . D 4 HOH A 55 273 273 HOH HOH . D 4 HOH A 56 274 274 HOH HOH . D 4 HOH A 57 275 275 HOH HOH . D 4 HOH A 58 276 276 HOH HOH . D 4 HOH A 59 277 277 HOH HOH . D 4 HOH A 60 278 278 HOH HOH . D 4 HOH A 61 279 279 HOH HOH . D 4 HOH A 62 280 280 HOH HOH . D 4 HOH A 63 281 281 HOH HOH . D 4 HOH A 64 282 282 HOH HOH . D 4 HOH A 65 283 283 HOH HOH . D 4 HOH A 66 284 284 HOH HOH . D 4 HOH A 67 285 285 HOH HOH . D 4 HOH A 68 286 286 HOH HOH . D 4 HOH A 69 287 287 HOH HOH . D 4 HOH A 70 288 288 HOH HOH . D 4 HOH A 71 289 289 HOH HOH . D 4 HOH A 72 290 290 HOH HOH . D 4 HOH A 73 291 291 HOH HOH . D 4 HOH A 74 292 292 HOH HOH . D 4 HOH A 75 293 293 HOH HOH . D 4 HOH A 76 294 294 HOH HOH . D 4 HOH A 77 295 295 HOH HOH . D 4 HOH A 78 296 296 HOH HOH . D 4 HOH A 79 297 297 HOH HOH . D 4 HOH A 80 298 298 HOH HOH . D 4 HOH A 81 299 299 HOH HOH . D 4 HOH A 82 300 300 HOH HOH . D 4 HOH A 83 301 301 HOH HOH . D 4 HOH A 84 302 302 HOH HOH . D 4 HOH A 85 303 303 HOH HOH . D 4 HOH A 86 304 304 HOH HOH . D 4 HOH A 87 305 305 HOH HOH . D 4 HOH A 88 306 306 HOH HOH . D 4 HOH A 89 307 307 HOH HOH . D 4 HOH A 90 308 308 HOH HOH . D 4 HOH A 91 309 309 HOH HOH . D 4 HOH A 92 310 310 HOH HOH . D 4 HOH A 93 311 311 HOH HOH . D 4 HOH A 94 312 312 HOH HOH . D 4 HOH A 95 313 313 HOH HOH . D 4 HOH A 96 314 314 HOH HOH . D 4 HOH A 97 315 315 HOH HOH . D 4 HOH A 98 316 316 HOH HOH . D 4 HOH A 99 317 317 HOH HOH . D 4 HOH A 100 318 318 HOH HOH . D 4 HOH A 101 319 319 HOH HOH . D 4 HOH A 102 320 320 HOH HOH . D 4 HOH A 103 321 321 HOH HOH . D 4 HOH A 104 322 322 HOH HOH . D 4 HOH A 105 323 323 HOH HOH . D 4 HOH A 106 324 324 HOH HOH . D 4 HOH A 107 325 325 HOH HOH . D 4 HOH A 108 326 326 HOH HOH . D 4 HOH A 109 327 327 HOH HOH . D 4 HOH A 110 328 328 HOH HOH . D 4 HOH A 111 329 329 HOH HOH . D 4 HOH A 112 330 330 HOH HOH . D 4 HOH A 113 331 331 HOH HOH . D 4 HOH A 114 332 332 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 31.472 75.861 9.815 1 19.83 ? C1 GOL 218 A 1 HETATM 2 O O1 GOL . . . C 3 30.238 76.399 9.375 1 36.29 ? O1 GOL 218 A 1 HETATM 3 C C2 GOL . . . C 3 31.094 74.35 9.588 1 13.21 ? C2 GOL 218 A 1 HETATM 4 O O2 GOL . . . C 3 31.062 73.959 11.032 1 31.32 ? O2 GOL 218 A 1 HETATM 5 C C3 GOL . . . C 3 32.256 73.6 9.183 1 22.03 ? C3 GOL 218 A 1 HETATM 6 O O3 GOL . . . C 3 33.027 73.499 10.397 1 31.18 ? O3 GOL 218 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #