data_3Q19 # _model_server_result.job_id gDPfjqOCVi5k4bWSDhqG5g _model_server_result.datetime_utc '2024-11-06 09:27:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q19 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":240}' # _entry.id 3Q19 # _exptl.entry_id 3Q19 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.55 _cell.angle_gamma 90 _cell.entry_id 3Q19 _cell.length_a 46.425 _cell.length_b 85.017 _cell.length_c 60.397 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q19 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 3Q19 _atom_sites.fract_transf_matrix[1][1] 0.02154 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001714 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016609 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 240 1 GSH GTT . D 3 CL A 1 241 1 CL CL . E 2 GSH B 1 240 1 GSH GTT . F 3 CL B 1 241 2 CL CL . G 4 HOH A 1 242 4 HOH HOH . G 4 HOH A 2 243 6 HOH HOH . G 4 HOH A 3 244 8 HOH HOH . G 4 HOH A 4 245 12 HOH HOH . G 4 HOH A 5 246 14 HOH HOH . G 4 HOH A 6 247 15 HOH HOH . G 4 HOH A 7 248 16 HOH HOH . G 4 HOH A 8 249 19 HOH HOH . G 4 HOH A 9 250 21 HOH HOH . G 4 HOH A 10 251 22 HOH HOH . G 4 HOH A 11 252 25 HOH HOH . G 4 HOH A 12 253 27 HOH HOH . G 4 HOH A 13 254 28 HOH HOH . G 4 HOH A 14 255 29 HOH HOH . G 4 HOH A 15 256 31 HOH HOH . G 4 HOH A 16 257 33 HOH HOH . G 4 HOH A 17 258 34 HOH HOH . G 4 HOH A 18 259 35 HOH HOH . G 4 HOH A 19 260 36 HOH HOH . G 4 HOH A 20 261 37 HOH HOH . G 4 HOH A 21 262 39 HOH HOH . G 4 HOH A 22 263 44 HOH HOH . G 4 HOH A 23 264 45 HOH HOH . G 4 HOH A 24 265 46 HOH HOH . G 4 HOH A 25 266 49 HOH HOH . G 4 HOH A 26 267 50 HOH HOH . G 4 HOH A 27 268 54 HOH HOH . G 4 HOH A 28 269 58 HOH HOH . G 4 HOH A 29 270 61 HOH HOH . G 4 HOH A 30 271 62 HOH HOH . G 4 HOH A 31 272 64 HOH HOH . G 4 HOH A 32 273 65 HOH HOH . G 4 HOH A 33 274 66 HOH HOH . G 4 HOH A 34 275 72 HOH HOH . G 4 HOH A 35 276 73 HOH HOH . G 4 HOH A 36 277 75 HOH HOH . G 4 HOH A 37 278 76 HOH HOH . G 4 HOH A 38 279 77 HOH HOH . G 4 HOH A 39 280 78 HOH HOH . G 4 HOH A 40 281 81 HOH HOH . G 4 HOH A 41 282 82 HOH HOH . G 4 HOH A 42 283 83 HOH HOH . G 4 HOH A 43 284 86 HOH HOH . G 4 HOH A 44 285 87 HOH HOH . G 4 HOH A 45 286 88 HOH HOH . G 4 HOH A 46 287 89 HOH HOH . G 4 HOH A 47 288 92 HOH HOH . G 4 HOH A 48 289 95 HOH HOH . G 4 HOH A 49 290 97 HOH HOH . G 4 HOH A 50 291 98 HOH HOH . G 4 HOH A 51 292 100 HOH HOH . G 4 HOH A 52 293 102 HOH HOH . G 4 HOH A 53 294 103 HOH HOH . G 4 HOH A 54 295 105 HOH HOH . G 4 HOH A 55 296 107 HOH HOH . G 4 HOH A 56 297 108 HOH HOH . G 4 HOH A 57 298 109 HOH HOH . G 4 HOH A 58 299 110 HOH HOH . G 4 HOH A 59 300 112 HOH HOH . G 4 HOH A 60 301 113 HOH HOH . G 4 HOH A 61 302 114 HOH HOH . G 4 HOH A 62 303 115 HOH HOH . G 4 HOH A 63 304 117 HOH HOH . G 4 HOH A 64 305 118 HOH HOH . G 4 HOH A 65 306 122 HOH HOH . G 4 HOH A 66 307 123 HOH HOH . G 4 HOH A 67 308 124 HOH HOH . G 4 HOH A 68 309 126 HOH HOH . G 4 HOH A 69 310 129 HOH HOH . G 4 HOH A 70 311 136 HOH HOH . G 4 HOH A 71 312 137 HOH HOH . G 4 HOH A 72 313 138 HOH HOH . G 4 HOH A 73 314 142 HOH HOH . G 4 HOH A 74 315 143 HOH HOH . G 4 HOH A 75 316 145 HOH HOH . G 4 HOH A 76 317 147 HOH HOH . G 4 HOH A 77 318 149 HOH HOH . G 4 HOH A 78 319 154 HOH HOH . G 4 HOH A 79 320 155 HOH HOH . G 4 HOH A 80 321 156 HOH HOH . G 4 HOH A 81 322 163 HOH HOH . G 4 HOH A 82 323 165 HOH HOH . G 4 HOH A 83 324 166 HOH HOH . G 4 HOH A 84 325 167 HOH HOH . G 4 HOH A 85 326 168 HOH HOH . G 4 HOH A 86 327 169 HOH HOH . G 4 HOH A 87 328 171 HOH HOH . G 4 HOH A 88 329 172 HOH HOH . G 4 HOH A 89 330 175 HOH HOH . G 4 HOH A 90 331 176 HOH HOH . G 4 HOH A 91 332 180 HOH HOH . G 4 HOH A 92 333 182 HOH HOH . G 4 HOH A 93 334 187 HOH HOH . G 4 HOH A 94 335 190 HOH HOH . G 4 HOH A 95 336 191 HOH HOH . G 4 HOH A 96 337 192 HOH HOH . G 4 HOH A 97 338 197 HOH HOH . G 4 HOH A 98 339 200 HOH HOH . G 4 HOH A 99 340 201 HOH HOH . G 4 HOH A 100 341 203 HOH HOH . G 4 HOH A 101 342 206 HOH HOH . G 4 HOH A 102 343 208 HOH HOH . G 4 HOH A 103 344 209 HOH HOH . G 4 HOH A 104 345 213 HOH HOH . G 4 HOH A 105 346 214 HOH HOH . G 4 HOH A 106 347 215 HOH HOH . G 4 HOH A 107 348 217 HOH HOH . G 4 HOH A 108 349 220 HOH HOH . G 4 HOH A 109 350 227 HOH HOH . G 4 HOH A 110 351 228 HOH HOH . G 4 HOH A 111 352 230 HOH HOH . G 4 HOH A 112 353 231 HOH HOH . G 4 HOH A 113 354 232 HOH HOH . H 4 HOH B 1 242 242 HOH HOH . H 4 HOH B 2 243 243 HOH HOH . H 4 HOH B 3 244 244 HOH HOH . H 4 HOH B 4 245 3 HOH HOH . H 4 HOH B 5 246 5 HOH HOH . H 4 HOH B 6 247 7 HOH HOH . H 4 HOH B 7 248 9 HOH HOH . H 4 HOH B 8 249 10 HOH HOH . H 4 HOH B 9 250 11 HOH HOH . H 4 HOH B 10 251 13 HOH HOH . H 4 HOH B 11 252 17 HOH HOH . H 4 HOH B 12 253 18 HOH HOH . H 4 HOH B 13 254 20 HOH HOH . H 4 HOH B 14 255 23 HOH HOH . H 4 HOH B 15 256 24 HOH HOH . H 4 HOH B 16 257 26 HOH HOH . H 4 HOH B 17 258 30 HOH HOH . H 4 HOH B 18 259 32 HOH HOH . H 4 HOH B 19 260 38 HOH HOH . H 4 HOH B 20 261 40 HOH HOH . H 4 HOH B 21 262 41 HOH HOH . H 4 HOH B 22 263 42 HOH HOH . H 4 HOH B 23 264 43 HOH HOH . H 4 HOH B 24 265 47 HOH HOH . H 4 HOH B 25 266 48 HOH HOH . H 4 HOH B 26 267 51 HOH HOH . H 4 HOH B 27 268 52 HOH HOH . H 4 HOH B 28 269 53 HOH HOH . H 4 HOH B 29 270 55 HOH HOH . H 4 HOH B 30 271 56 HOH HOH . H 4 HOH B 31 272 57 HOH HOH . H 4 HOH B 32 273 59 HOH HOH . H 4 HOH B 33 274 60 HOH HOH . H 4 HOH B 34 275 63 HOH HOH . H 4 HOH B 35 276 67 HOH HOH . H 4 HOH B 36 277 68 HOH HOH . H 4 HOH B 37 278 69 HOH HOH . H 4 HOH B 38 279 70 HOH HOH . H 4 HOH B 39 280 71 HOH HOH . H 4 HOH B 40 281 79 HOH HOH . H 4 HOH B 41 282 80 HOH HOH . H 4 HOH B 42 283 84 HOH HOH . H 4 HOH B 43 284 85 HOH HOH . H 4 HOH B 44 285 90 HOH HOH . H 4 HOH B 45 286 91 HOH HOH . H 4 HOH B 46 287 93 HOH HOH . H 4 HOH B 47 288 94 HOH HOH . H 4 HOH B 48 289 99 HOH HOH . H 4 HOH B 49 290 101 HOH HOH . H 4 HOH B 50 291 104 HOH HOH . H 4 HOH B 51 292 106 HOH HOH . H 4 HOH B 52 293 111 HOH HOH . H 4 HOH B 53 294 116 HOH HOH . H 4 HOH B 54 295 119 HOH HOH . H 4 HOH B 55 296 121 HOH HOH . H 4 HOH B 56 297 125 HOH HOH . H 4 HOH B 57 298 127 HOH HOH . H 4 HOH B 58 299 128 HOH HOH . H 4 HOH B 59 300 130 HOH HOH . H 4 HOH B 60 301 131 HOH HOH . H 4 HOH B 61 302 132 HOH HOH . H 4 HOH B 62 303 133 HOH HOH . H 4 HOH B 63 304 134 HOH HOH . H 4 HOH B 64 305 139 HOH HOH . H 4 HOH B 65 306 140 HOH HOH . H 4 HOH B 66 307 141 HOH HOH . H 4 HOH B 67 308 144 HOH HOH . H 4 HOH B 68 309 146 HOH HOH . H 4 HOH B 69 310 148 HOH HOH . H 4 HOH B 70 311 150 HOH HOH . H 4 HOH B 71 312 151 HOH HOH . H 4 HOH B 72 313 153 HOH HOH . H 4 HOH B 73 314 157 HOH HOH . H 4 HOH B 74 315 159 HOH HOH . H 4 HOH B 75 316 162 HOH HOH . H 4 HOH B 76 317 164 HOH HOH . H 4 HOH B 77 318 170 HOH HOH . H 4 HOH B 78 319 173 HOH HOH . H 4 HOH B 79 320 177 HOH HOH . H 4 HOH B 80 321 184 HOH HOH . H 4 HOH B 81 322 185 HOH HOH . H 4 HOH B 82 323 186 HOH HOH . H 4 HOH B 83 324 188 HOH HOH . H 4 HOH B 84 325 189 HOH HOH . H 4 HOH B 85 326 193 HOH HOH . H 4 HOH B 86 327 194 HOH HOH . H 4 HOH B 87 328 196 HOH HOH . H 4 HOH B 88 329 202 HOH HOH . H 4 HOH B 89 330 204 HOH HOH . H 4 HOH B 90 331 205 HOH HOH . H 4 HOH B 91 332 218 HOH HOH . H 4 HOH B 92 333 219 HOH HOH . H 4 HOH B 93 334 223 HOH HOH . H 4 HOH B 94 335 224 HOH HOH . H 4 HOH B 95 336 229 HOH HOH . H 4 HOH B 96 337 234 HOH HOH . H 4 HOH B 97 338 235 HOH HOH . H 4 HOH B 98 339 236 HOH HOH . H 4 HOH B 99 340 237 HOH HOH . H 4 HOH B 100 341 238 HOH HOH . H 4 HOH B 101 342 239 HOH HOH . H 4 HOH B 102 343 240 HOH HOH . H 4 HOH B 103 344 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . C 2 15.237 -2.911 19.04 0.71 34.46 ? N1 GSH 240 A 1 HETATM 2 C CA1 GSH . . . C 2 15.608 -4.204 19.58 0.71 33.78 ? CA1 GSH 240 A 1 HETATM 3 C C1 GSH . . . C 2 14.418 -4.769 20.302 0.71 31.84 ? C1 GSH 240 A 1 HETATM 4 O O11 GSH . . . C 2 13.36 -4.118 20.381 0.71 33.14 ? O11 GSH 240 A 1 HETATM 5 O O12 GSH . . . C 2 14.436 -5.904 20.793 0.71 28.22 ? O12 GSH 240 A 1 HETATM 6 C CB1 GSH . . . C 2 16.859 -4.042 20.459 0.71 34.99 ? CB1 GSH 240 A 1 HETATM 7 C CG1 GSH . . . C 2 17.552 -5.347 20.873 0.71 35.69 ? CG1 GSH 240 A 1 HETATM 8 C CD1 GSH . . . C 2 18.876 -5.031 21.554 0.71 37.26 ? CD1 GSH 240 A 1 HETATM 9 O OE1 GSH . . . C 2 19.539 -3.813 21.304 0.71 37.05 ? OE1 GSH 240 A 1 HETATM 10 N N2 GSH . . . C 2 19.371 -5.939 22.398 0.71 38.92 ? N2 GSH 240 A 1 HETATM 11 C CA2 GSH . . . C 2 20.709 -5.809 22.951 0.71 40.71 ? CA2 GSH 240 A 1 HETATM 12 C C2 GSH . . . C 2 21.738 -6.189 21.922 0.71 42.73 ? C2 GSH 240 A 1 HETATM 13 O O2 GSH . . . C 2 21.4 -7.067 20.871 0.71 42.6 ? O2 GSH 240 A 1 HETATM 14 C CB2 GSH . . . C 2 20.877 -6.665 24.204 0.71 39.94 ? CB2 GSH 240 A 1 HETATM 15 S SG2 GSH . . . C 2 19.768 -6.205 25.574 0.71 38.97 ? SG2 GSH 240 A 1 HETATM 16 N N3 GSH . . . C 2 22.957 -5.662 22.051 0.71 45.55 ? N3 GSH 240 A 1 HETATM 17 C CA3 GSH . . . C 2 24.142 -6.333 21.536 0.71 46.73 ? CA3 GSH 240 A 1 HETATM 18 C C3 GSH . . . C 2 24.675 -5.693 20.275 0.71 48.49 ? C3 GSH 240 A 1 HETATM 19 O O31 GSH . . . C 2 25.412 -6.341 19.499 0.71 49.67 ? O31 GSH 240 A 1 HETATM 20 O O32 GSH . . . C 2 24.4 -4.506 19.984 0.71 50.32 ? O32 GSH 240 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #