data_3Q1I # _model_server_result.job_id xCxh1xpRCxRkMz9MLPjYCA _model_server_result.datetime_utc '2024-10-18 04:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q1i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":596}' # _entry.id 3Q1I # _exptl.entry_id 3Q1I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101 _cell.angle_gamma 90 _cell.entry_id 3Q1I _cell.length_a 35.5 _cell.length_b 51.5 _cell.length_c 57.6 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q1I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 8 E SER 105 1_555 B N SEP 9 E SEP 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C SEP 9 E SEP 106 1_555 B N MET 10 E MET 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C MET 10 E MET 107 1_555 B N NH2 11 E NH2 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 282 n n C1 C2 PEG sing 283 n n C1 H11 PEG sing 284 n n C1 H12 PEG sing 285 n n O1 HO1 PEG sing 286 n n C2 O2 PEG sing 287 n n C2 H21 PEG sing 288 n n C2 H22 PEG sing 289 n n O2 C3 PEG sing 290 n n C3 C4 PEG sing 291 n n C3 H31 PEG sing 292 n n C3 H32 PEG sing 293 n n C4 O4 PEG sing 294 n n C4 H41 PEG sing 295 n n C4 H42 PEG sing 296 n n O4 HO4 PEG sing 297 n n # _atom_sites.entry_id 3Q1I _atom_sites.fract_transf_matrix[1][1] 0.028169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005476 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017686 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1PE A 1 595 1 1PE 1PE . D 4 PEG A 1 596 2 PEG PEG . E 5 PG0 A 1 597 596 PG0 PG0 . F 6 HOH A 1 9 9 HOH HOH . F 6 HOH A 2 10 10 HOH HOH . F 6 HOH A 3 11 11 HOH HOH . F 6 HOH A 4 12 12 HOH HOH . F 6 HOH A 5 13 13 HOH HOH . F 6 HOH A 6 14 14 HOH HOH . F 6 HOH A 7 15 15 HOH HOH . F 6 HOH A 8 16 16 HOH HOH . F 6 HOH A 9 17 17 HOH HOH . F 6 HOH A 10 18 18 HOH HOH . F 6 HOH A 11 19 19 HOH HOH . F 6 HOH A 12 20 20 HOH HOH . F 6 HOH A 13 21 21 HOH HOH . F 6 HOH A 14 22 22 HOH HOH . F 6 HOH A 15 23 23 HOH HOH . F 6 HOH A 16 24 24 HOH HOH . F 6 HOH A 17 25 25 HOH HOH . F 6 HOH A 18 26 26 HOH HOH . F 6 HOH A 19 27 27 HOH HOH . F 6 HOH A 20 28 28 HOH HOH . F 6 HOH A 21 29 29 HOH HOH . F 6 HOH A 22 31 31 HOH HOH . F 6 HOH A 23 32 32 HOH HOH . F 6 HOH A 24 33 33 HOH HOH . F 6 HOH A 25 34 34 HOH HOH . F 6 HOH A 26 35 35 HOH HOH . F 6 HOH A 27 36 36 HOH HOH . F 6 HOH A 28 37 37 HOH HOH . F 6 HOH A 29 38 38 HOH HOH . F 6 HOH A 30 39 39 HOH HOH . F 6 HOH A 31 41 41 HOH HOH . F 6 HOH A 32 42 42 HOH HOH . F 6 HOH A 33 43 43 HOH HOH . F 6 HOH A 34 44 44 HOH HOH . F 6 HOH A 35 45 45 HOH HOH . F 6 HOH A 36 46 46 HOH HOH . F 6 HOH A 37 47 47 HOH HOH . F 6 HOH A 38 48 48 HOH HOH . F 6 HOH A 39 50 50 HOH HOH . F 6 HOH A 40 51 51 HOH HOH . F 6 HOH A 41 52 52 HOH HOH . F 6 HOH A 42 53 53 HOH HOH . F 6 HOH A 43 56 56 HOH HOH . F 6 HOH A 44 57 57 HOH HOH . F 6 HOH A 45 58 58 HOH HOH . F 6 HOH A 46 59 59 HOH HOH . F 6 HOH A 47 60 60 HOH HOH . F 6 HOH A 48 61 61 HOH HOH . F 6 HOH A 49 62 62 HOH HOH . F 6 HOH A 50 63 63 HOH HOH . F 6 HOH A 51 64 64 HOH HOH . F 6 HOH A 52 65 65 HOH HOH . F 6 HOH A 53 66 66 HOH HOH . F 6 HOH A 54 67 67 HOH HOH . F 6 HOH A 55 68 68 HOH HOH . F 6 HOH A 56 69 69 HOH HOH . F 6 HOH A 57 70 70 HOH HOH . F 6 HOH A 58 71 71 HOH HOH . F 6 HOH A 59 72 72 HOH HOH . F 6 HOH A 60 73 73 HOH HOH . F 6 HOH A 61 74 74 HOH HOH . F 6 HOH A 62 75 75 HOH HOH . F 6 HOH A 63 77 77 HOH HOH . F 6 HOH A 64 78 78 HOH HOH . F 6 HOH A 65 79 79 HOH HOH . F 6 HOH A 66 84 84 HOH HOH . F 6 HOH A 67 85 85 HOH HOH . F 6 HOH A 68 86 86 HOH HOH . F 6 HOH A 69 87 87 HOH HOH . F 6 HOH A 70 88 88 HOH HOH . F 6 HOH A 71 89 89 HOH HOH . F 6 HOH A 72 90 90 HOH HOH . F 6 HOH A 73 91 91 HOH HOH . F 6 HOH A 74 92 92 HOH HOH . F 6 HOH A 75 93 93 HOH HOH . F 6 HOH A 76 94 94 HOH HOH . F 6 HOH A 77 95 95 HOH HOH . F 6 HOH A 78 96 96 HOH HOH . F 6 HOH A 79 97 97 HOH HOH . F 6 HOH A 80 98 98 HOH HOH . F 6 HOH A 81 99 99 HOH HOH . F 6 HOH A 82 100 100 HOH HOH . F 6 HOH A 83 101 101 HOH HOH . F 6 HOH A 84 102 102 HOH HOH . F 6 HOH A 85 103 103 HOH HOH . F 6 HOH A 86 104 104 HOH HOH . F 6 HOH A 87 105 105 HOH HOH . F 6 HOH A 88 106 106 HOH HOH . F 6 HOH A 89 107 107 HOH HOH . F 6 HOH A 90 108 108 HOH HOH . F 6 HOH A 91 109 109 HOH HOH . F 6 HOH A 92 110 110 HOH HOH . F 6 HOH A 93 112 112 HOH HOH . F 6 HOH A 94 113 113 HOH HOH . F 6 HOH A 95 114 114 HOH HOH . F 6 HOH A 96 115 115 HOH HOH . F 6 HOH A 97 116 116 HOH HOH . F 6 HOH A 98 117 117 HOH HOH . F 6 HOH A 99 118 118 HOH HOH . F 6 HOH A 100 119 119 HOH HOH . F 6 HOH A 101 120 120 HOH HOH . F 6 HOH A 102 121 121 HOH HOH . F 6 HOH A 103 122 122 HOH HOH . F 6 HOH A 104 123 123 HOH HOH . F 6 HOH A 105 124 124 HOH HOH . F 6 HOH A 106 125 125 HOH HOH . F 6 HOH A 107 126 126 HOH HOH . F 6 HOH A 108 127 127 HOH HOH . F 6 HOH A 109 128 128 HOH HOH . F 6 HOH A 110 130 130 HOH HOH . F 6 HOH A 111 134 134 HOH HOH . F 6 HOH A 112 135 135 HOH HOH . F 6 HOH A 113 136 136 HOH HOH . F 6 HOH A 114 137 137 HOH HOH . F 6 HOH A 115 138 138 HOH HOH . F 6 HOH A 116 139 139 HOH HOH . F 6 HOH A 117 140 140 HOH HOH . F 6 HOH A 118 141 141 HOH HOH . F 6 HOH A 119 142 142 HOH HOH . F 6 HOH A 120 143 143 HOH HOH . F 6 HOH A 121 144 144 HOH HOH . F 6 HOH A 122 145 145 HOH HOH . F 6 HOH A 123 146 146 HOH HOH . F 6 HOH A 124 147 147 HOH HOH . F 6 HOH A 125 148 148 HOH HOH . F 6 HOH A 126 149 149 HOH HOH . F 6 HOH A 127 150 150 HOH HOH . F 6 HOH A 128 152 152 HOH HOH . F 6 HOH A 129 153 153 HOH HOH . F 6 HOH A 130 154 154 HOH HOH . F 6 HOH A 131 155 155 HOH HOH . F 6 HOH A 132 159 159 HOH HOH . F 6 HOH A 133 160 160 HOH HOH . F 6 HOH A 134 161 161 HOH HOH . F 6 HOH A 135 162 162 HOH HOH . F 6 HOH A 136 163 163 HOH HOH . F 6 HOH A 137 164 164 HOH HOH . F 6 HOH A 138 165 165 HOH HOH . F 6 HOH A 139 166 166 HOH HOH . F 6 HOH A 140 167 167 HOH HOH . F 6 HOH A 141 168 168 HOH HOH . F 6 HOH A 142 169 169 HOH HOH . F 6 HOH A 143 170 170 HOH HOH . F 6 HOH A 144 171 171 HOH HOH . F 6 HOH A 145 172 172 HOH HOH . F 6 HOH A 146 173 173 HOH HOH . F 6 HOH A 147 174 174 HOH HOH . F 6 HOH A 148 175 175 HOH HOH . F 6 HOH A 149 176 176 HOH HOH . F 6 HOH A 150 178 178 HOH HOH . F 6 HOH A 151 180 180 HOH HOH . F 6 HOH A 152 181 181 HOH HOH . F 6 HOH A 153 182 182 HOH HOH . F 6 HOH A 154 183 183 HOH HOH . F 6 HOH A 155 184 184 HOH HOH . F 6 HOH A 156 187 187 HOH HOH . F 6 HOH A 157 189 189 HOH HOH . F 6 HOH A 158 190 190 HOH HOH . F 6 HOH A 159 191 191 HOH HOH . F 6 HOH A 160 192 192 HOH HOH . F 6 HOH A 161 194 194 HOH HOH . F 6 HOH A 162 195 195 HOH HOH . F 6 HOH A 163 196 196 HOH HOH . F 6 HOH A 164 197 197 HOH HOH . F 6 HOH A 165 199 199 HOH HOH . F 6 HOH A 166 201 201 HOH HOH . F 6 HOH A 167 202 202 HOH HOH . F 6 HOH A 168 203 203 HOH HOH . F 6 HOH A 169 204 204 HOH HOH . F 6 HOH A 170 207 207 HOH HOH . F 6 HOH A 171 208 208 HOH HOH . F 6 HOH A 172 209 209 HOH HOH . F 6 HOH A 173 210 210 HOH HOH . F 6 HOH A 174 211 211 HOH HOH . F 6 HOH A 175 212 212 HOH HOH . F 6 HOH A 176 598 3 HOH HOH . F 6 HOH A 177 599 5 HOH HOH . F 6 HOH A 178 600 6 HOH HOH . F 6 HOH A 179 601 7 HOH HOH . F 6 HOH A 180 602 8 HOH HOH . G 6 HOH E 1 1 1 HOH HOH . G 6 HOH E 2 2 2 HOH HOH . G 6 HOH E 3 4 4 HOH HOH . G 6 HOH E 4 30 30 HOH HOH . G 6 HOH E 5 40 40 HOH HOH . G 6 HOH E 6 49 49 HOH HOH . G 6 HOH E 7 55 55 HOH HOH . G 6 HOH E 8 80 80 HOH HOH . G 6 HOH E 9 82 82 HOH HOH . G 6 HOH E 10 83 83 HOH HOH . G 6 HOH E 11 111 111 HOH HOH . G 6 HOH E 12 129 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 23.757 9.298 1.221 1 55.74 ? C1 PEG 596 A 1 HETATM 2 O O1 PEG . . . D 4 25.123 8.923 1.433 1 55.76 ? O1 PEG 596 A 1 HETATM 3 C C2 PEG . . . D 4 23.016 8.157 0.535 1 55.79 ? C2 PEG 596 A 1 HETATM 4 O O2 PEG . . . D 4 23.66 7.847 -0.698 1 55.87 ? O2 PEG 596 A 1 HETATM 5 C C3 PEG . . . D 4 22.724 7.503 -1.717 1 55.94 ? C3 PEG 596 A 1 HETATM 6 C C4 PEG . . . D 4 23.351 6.483 -2.659 1 56.01 ? C4 PEG 596 A 1 HETATM 7 O O4 PEG . . . D 4 22.912 6.739 -3.998 1 56.17 ? O4 PEG 596 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #