data_3Q1S
#
_model_server_result.job_id            j0v1OpAJhJZMfEff_fEwNQ 
_model_server_result.datetime_utc      '2024-11-04 20:15:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q1s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":9}' 
#
_entry.id    3Q1S 
#
_exptl.entry_id    3Q1S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3Q1S 
_cell.length_a            56.623 
_cell.length_b            99.216 
_cell.length_c            105.533 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q1S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 21 L CYS 23 1_555 A SG CYS 86 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
disulf ? disulf2 A SG CYS 132 L CYS 134 1_555 A SG CYS 192 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
disulf ? disulf4 B SG CYS 152 H CYS 152 1_555 B SG CYS 208 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf5 C SG CYS 12 I CYS 40 1_555 C SG CYS 104 I CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf6 C SG CYS 61 I CYS 89 1_555 C SG CYS 150 I CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3Q1S 
_atom_sites.fract_transf_matrix[1][1]    0.017661 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010079 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009476 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 IPA L 1 1 1 IPA IOH . 
E 4 IPA L 1 2 2 IPA IOH . 
F 5 GOL L 1 215 3 GOL GOL . 
G 5 GOL L 1 216 6 GOL GOL . 
H 5 GOL L 1 217 7 GOL GOL . 
I 5 GOL L 1 218 10 GOL GOL . 
J 5 GOL H 1 231 1 GOL GOL . 
K 5 GOL H 1 232 4 GOL GOL . 
L 5 GOL H 1 233 5 GOL GOL . 
M 5 GOL H 1 234 8 GOL GOL . 
N 5 GOL I 1 2 2 GOL GOL . 
O 5 GOL I 1 9 9 GOL GOL . 
P 6 HOH L 1 219 219 HOH HOH . 
P 6 HOH L 2 220 220 HOH HOH . 
P 6 HOH L 3 221 221 HOH HOH . 
P 6 HOH L 4 222 222 HOH HOH . 
P 6 HOH L 5 223 223 HOH HOH . 
P 6 HOH L 6 224 2 HOH HOH . 
P 6 HOH L 7 225 3 HOH HOH . 
P 6 HOH L 8 226 6 HOH HOH . 
P 6 HOH L 9 227 11 HOH HOH . 
P 6 HOH L 10 228 228 HOH HOH . 
P 6 HOH L 11 229 15 HOH HOH . 
P 6 HOH L 12 230 230 HOH HOH . 
P 6 HOH L 13 231 24 HOH HOH . 
P 6 HOH L 14 232 25 HOH HOH . 
P 6 HOH L 15 233 29 HOH HOH . 
P 6 HOH L 16 234 32 HOH HOH . 
P 6 HOH L 17 235 33 HOH HOH . 
P 6 HOH L 18 236 236 HOH HOH . 
P 6 HOH L 19 237 35 HOH HOH . 
P 6 HOH L 20 238 39 HOH HOH . 
P 6 HOH L 21 239 42 HOH HOH . 
P 6 HOH L 22 240 240 HOH HOH . 
P 6 HOH L 23 241 241 HOH HOH . 
P 6 HOH L 24 242 242 HOH HOH . 
P 6 HOH L 25 243 243 HOH HOH . 
P 6 HOH L 26 244 43 HOH HOH . 
P 6 HOH L 27 245 45 HOH HOH . 
P 6 HOH L 28 246 48 HOH HOH . 
P 6 HOH L 29 247 247 HOH HOH . 
P 6 HOH L 30 248 55 HOH HOH . 
P 6 HOH L 31 249 249 HOH HOH . 
P 6 HOH L 32 250 57 HOH HOH . 
P 6 HOH L 33 251 59 HOH HOH . 
P 6 HOH L 34 252 69 HOH HOH . 
P 6 HOH L 35 253 70 HOH HOH . 
P 6 HOH L 36 254 73 HOH HOH . 
P 6 HOH L 37 255 74 HOH HOH . 
P 6 HOH L 38 256 77 HOH HOH . 
P 6 HOH L 39 257 79 HOH HOH . 
P 6 HOH L 40 258 82 HOH HOH . 
P 6 HOH L 41 259 86 HOH HOH . 
P 6 HOH L 42 260 87 HOH HOH . 
P 6 HOH L 43 261 90 HOH HOH . 
P 6 HOH L 44 262 92 HOH HOH . 
P 6 HOH L 45 263 103 HOH HOH . 
P 6 HOH L 46 264 104 HOH HOH . 
P 6 HOH L 47 265 109 HOH HOH . 
P 6 HOH L 48 266 110 HOH HOH . 
P 6 HOH L 49 267 117 HOH HOH . 
P 6 HOH L 50 268 118 HOH HOH . 
P 6 HOH L 51 269 120 HOH HOH . 
P 6 HOH L 52 270 121 HOH HOH . 
P 6 HOH L 53 271 123 HOH HOH . 
P 6 HOH L 54 272 124 HOH HOH . 
P 6 HOH L 55 273 131 HOH HOH . 
P 6 HOH L 56 274 132 HOH HOH . 
P 6 HOH L 57 275 137 HOH HOH . 
P 6 HOH L 58 276 139 HOH HOH . 
P 6 HOH L 59 277 141 HOH HOH . 
P 6 HOH L 60 278 144 HOH HOH . 
P 6 HOH L 61 279 145 HOH HOH . 
P 6 HOH L 62 280 146 HOH HOH . 
P 6 HOH L 63 281 154 HOH HOH . 
P 6 HOH L 64 282 158 HOH HOH . 
P 6 HOH L 65 283 159 HOH HOH . 
P 6 HOH L 66 284 160 HOH HOH . 
P 6 HOH L 67 285 161 HOH HOH . 
P 6 HOH L 68 286 163 HOH HOH . 
P 6 HOH L 69 287 165 HOH HOH . 
P 6 HOH L 70 288 166 HOH HOH . 
P 6 HOH L 71 289 170 HOH HOH . 
P 6 HOH L 72 290 172 HOH HOH . 
P 6 HOH L 73 291 175 HOH HOH . 
P 6 HOH L 74 292 179 HOH HOH . 
P 6 HOH L 75 293 184 HOH HOH . 
P 6 HOH L 76 294 199 HOH HOH . 
P 6 HOH L 77 295 200 HOH HOH . 
P 6 HOH L 78 296 201 HOH HOH . 
P 6 HOH L 79 297 203 HOH HOH . 
P 6 HOH L 80 298 204 HOH HOH . 
P 6 HOH L 81 299 207 HOH HOH . 
P 6 HOH L 82 300 212 HOH HOH . 
P 6 HOH L 83 301 214 HOH HOH . 
P 6 HOH L 84 302 215 HOH HOH . 
P 6 HOH L 85 303 218 HOH HOH . 
Q 6 HOH H 1 235 1 HOH HOH . 
Q 6 HOH H 2 236 5 HOH HOH . 
Q 6 HOH H 3 237 7 HOH HOH . 
Q 6 HOH H 4 238 238 HOH HOH . 
Q 6 HOH H 5 239 239 HOH HOH . 
Q 6 HOH H 6 240 8 HOH HOH . 
Q 6 HOH H 7 241 9 HOH HOH . 
Q 6 HOH H 8 242 12 HOH HOH . 
Q 6 HOH H 9 243 13 HOH HOH . 
Q 6 HOH H 10 244 17 HOH HOH . 
Q 6 HOH H 11 245 18 HOH HOH . 
Q 6 HOH H 12 246 246 HOH HOH . 
Q 6 HOH H 13 247 19 HOH HOH . 
Q 6 HOH H 14 248 248 HOH HOH . 
Q 6 HOH H 15 249 20 HOH HOH . 
Q 6 HOH H 16 250 250 HOH HOH . 
Q 6 HOH H 17 251 21 HOH HOH . 
Q 6 HOH H 18 252 22 HOH HOH . 
Q 6 HOH H 19 253 27 HOH HOH . 
Q 6 HOH H 20 254 28 HOH HOH . 
Q 6 HOH H 21 255 30 HOH HOH . 
Q 6 HOH H 22 256 31 HOH HOH . 
Q 6 HOH H 23 257 34 HOH HOH . 
Q 6 HOH H 24 258 36 HOH HOH . 
Q 6 HOH H 25 259 40 HOH HOH . 
Q 6 HOH H 26 260 41 HOH HOH . 
Q 6 HOH H 27 261 46 HOH HOH . 
Q 6 HOH H 28 262 49 HOH HOH . 
Q 6 HOH H 29 263 50 HOH HOH . 
Q 6 HOH H 30 264 51 HOH HOH . 
Q 6 HOH H 31 265 52 HOH HOH . 
Q 6 HOH H 32 266 56 HOH HOH . 
Q 6 HOH H 33 267 60 HOH HOH . 
Q 6 HOH H 34 268 61 HOH HOH . 
Q 6 HOH H 35 269 62 HOH HOH . 
Q 6 HOH H 36 270 67 HOH HOH . 
Q 6 HOH H 37 271 68 HOH HOH . 
Q 6 HOH H 38 272 80 HOH HOH . 
Q 6 HOH H 39 273 84 HOH HOH . 
Q 6 HOH H 40 274 85 HOH HOH . 
Q 6 HOH H 41 275 88 HOH HOH . 
Q 6 HOH H 42 276 91 HOH HOH . 
Q 6 HOH H 43 277 93 HOH HOH . 
Q 6 HOH H 44 278 94 HOH HOH . 
Q 6 HOH H 45 279 95 HOH HOH . 
Q 6 HOH H 46 280 99 HOH HOH . 
Q 6 HOH H 47 281 100 HOH HOH . 
Q 6 HOH H 48 282 102 HOH HOH . 
Q 6 HOH H 49 283 105 HOH HOH . 
Q 6 HOH H 50 284 108 HOH HOH . 
Q 6 HOH H 51 285 113 HOH HOH . 
Q 6 HOH H 52 286 114 HOH HOH . 
Q 6 HOH H 53 287 116 HOH HOH . 
Q 6 HOH H 54 288 119 HOH HOH . 
Q 6 HOH H 55 289 125 HOH HOH . 
Q 6 HOH H 56 290 126 HOH HOH . 
Q 6 HOH H 57 291 127 HOH HOH . 
Q 6 HOH H 58 292 133 HOH HOH . 
Q 6 HOH H 59 293 136 HOH HOH . 
Q 6 HOH H 60 294 138 HOH HOH . 
Q 6 HOH H 61 295 140 HOH HOH . 
Q 6 HOH H 62 296 147 HOH HOH . 
Q 6 HOH H 63 297 148 HOH HOH . 
Q 6 HOH H 64 298 149 HOH HOH . 
Q 6 HOH H 65 299 151 HOH HOH . 
Q 6 HOH H 66 300 152 HOH HOH . 
Q 6 HOH H 67 301 153 HOH HOH . 
Q 6 HOH H 68 302 155 HOH HOH . 
Q 6 HOH H 69 303 156 HOH HOH . 
Q 6 HOH H 70 304 157 HOH HOH . 
Q 6 HOH H 71 305 162 HOH HOH . 
Q 6 HOH H 72 306 164 HOH HOH . 
Q 6 HOH H 73 307 171 HOH HOH . 
Q 6 HOH H 74 308 174 HOH HOH . 
Q 6 HOH H 75 309 176 HOH HOH . 
Q 6 HOH H 76 310 177 HOH HOH . 
Q 6 HOH H 77 311 181 HOH HOH . 
Q 6 HOH H 78 312 182 HOH HOH . 
Q 6 HOH H 79 313 183 HOH HOH . 
Q 6 HOH H 80 314 188 HOH HOH . 
Q 6 HOH H 81 315 190 HOH HOH . 
Q 6 HOH H 82 316 191 HOH HOH . 
Q 6 HOH H 83 317 192 HOH HOH . 
Q 6 HOH H 84 318 202 HOH HOH . 
Q 6 HOH H 85 319 205 HOH HOH . 
Q 6 HOH H 86 320 210 HOH HOH . 
Q 6 HOH H 87 321 213 HOH HOH . 
Q 6 HOH H 88 322 224 HOH HOH . 
Q 6 HOH H 89 323 225 HOH HOH . 
Q 6 HOH H 90 324 226 HOH HOH . 
Q 6 HOH H 91 325 227 HOH HOH . 
Q 6 HOH H 92 326 229 HOH HOH . 
Q 6 HOH H 93 327 232 HOH HOH . 
R 6 HOH I 1 26 26 HOH HOH . 
R 6 HOH I 2 180 58 HOH HOH . 
R 6 HOH I 3 181 63 HOH HOH . 
R 6 HOH I 4 182 64 HOH HOH . 
R 6 HOH I 5 183 65 HOH HOH . 
R 6 HOH I 6 184 81 HOH HOH . 
R 6 HOH I 7 185 89 HOH HOH . 
R 6 HOH I 8 186 186 HOH HOH . 
R 6 HOH I 9 187 98 HOH HOH . 
R 6 HOH I 10 188 112 HOH HOH . 
R 6 HOH I 11 189 122 HOH HOH . 
R 6 HOH I 12 190 128 HOH HOH . 
R 6 HOH I 13 191 135 HOH HOH . 
R 6 HOH I 14 192 143 HOH HOH . 
R 6 HOH I 15 193 169 HOH HOH . 
R 6 HOH I 16 194 194 HOH HOH . 
R 6 HOH I 17 195 178 HOH HOH . 
R 6 HOH I 18 208 208 HOH HOH . 
R 6 HOH I 19 209 209 HOH HOH . 
R 6 HOH I 20 216 216 HOH HOH . 
R 6 HOH I 21 234 234 HOH HOH . 
R 6 HOH I 22 235 235 HOH HOH . 
R 6 HOH I 23 237 237 HOH HOH . 
R 6 HOH I 24 244 244 HOH HOH . 
R 6 HOH I 25 245 245 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . O 5 -12.125 17.11 10.341 1 46.62 ? C1 GOL 9 I 1 
HETATM 2 O O1 GOL . . . O 5 -12.03 18.519 10.4 1 42.88 ? O1 GOL 9 I 1 
HETATM 3 C C2 GOL . . . O 5 -11.834 16.616 8.938 1 45.5 ? C2 GOL 9 I 1 
HETATM 4 O O2 GOL . . . O 5 -12.846 17.139 8.126 1 49.72 ? O2 GOL 9 I 1 
HETATM 5 C C3 GOL . . . O 5 -11.934 15.112 8.944 1 48.44 ? C3 GOL 9 I 1 
HETATM 6 O O3 GOL . . . O 5 -13.089 14.79 9.714 1 49.98 ? O3 GOL 9 I 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#