data_3Q2D
#
_model_server_result.job_id            iqZppCWB1W9VCZaeP6gh8w 
_model_server_result.datetime_utc      '2024-10-17 14:19:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q2d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":273}' 
#
_entry.id    3Q2D 
#
_exptl.entry_id    3Q2D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              164.122 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-nitro-1H-benzotriazole 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.36 
_cell.angle_gamma         90 
_cell.entry_id            3Q2D 
_cell.length_a            48.837 
_cell.length_b            41.307 
_cell.length_c            138.781 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q2D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H4 N4 O2' 
_chem_comp.formula_weight    164.122 
_chem_comp.id                3NY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-nitro-1H-benzotriazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 N2 3NY sing 1 n y 
N1 C7A 3NY sing 2 n y 
N1 HN1 3NY sing 3 n n 
N2 N3 3NY doub 4 n y 
N3 C3A 3NY sing 5 n y 
C4 C5 3NY doub 6 n y 
C4 H4 3NY sing 7 n n 
C5 NO1 3NY sing 8 n n 
C6 C5 3NY sing 9 n y 
C6 H6 3NY sing 10 n n 
C7 C6 3NY doub 11 n y 
C7 H7 3NY sing 12 n n 
C3A C4 3NY sing 13 n y 
C7A C7 3NY sing 14 n y 
C7A C3A 3NY doub 15 n y 
NO1 O11 3NY doub 16 n n 
NO1 O21 3NY sing 17 n n 
#
_atom_sites.entry_id                     3Q2D 
_atom_sites.fract_transf_matrix[1][1]    0.020476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001919 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024209 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 3NY A 1 273 253 3NY 3NY . 
D 2 3NY B 1 273 254 3NY 3NY . 
E 3 HOH A 1 274 257 HOH HOH . 
E 3 HOH A 2 275 258 HOH HOH . 
E 3 HOH A 3 276 260 HOH HOH . 
E 3 HOH A 4 277 261 HOH HOH . 
E 3 HOH A 5 278 263 HOH HOH . 
E 3 HOH A 6 279 264 HOH HOH . 
E 3 HOH A 7 280 280 HOH HOH . 
E 3 HOH A 8 281 267 HOH HOH . 
E 3 HOH A 9 282 268 HOH HOH . 
E 3 HOH A 10 283 283 HOH HOH . 
E 3 HOH A 11 284 284 HOH HOH . 
E 3 HOH A 12 285 269 HOH HOH . 
E 3 HOH A 13 286 286 HOH HOH . 
E 3 HOH A 14 287 270 HOH HOH . 
E 3 HOH A 15 288 288 HOH HOH . 
F 3 HOH B 1 274 274 HOH HOH . 
F 3 HOH B 2 275 275 HOH HOH . 
F 3 HOH B 3 276 276 HOH HOH . 
F 3 HOH B 4 277 277 HOH HOH . 
F 3 HOH B 5 278 278 HOH HOH . 
F 3 HOH B 6 279 279 HOH HOH . 
F 3 HOH B 7 280 255 HOH HOH . 
F 3 HOH B 8 281 281 HOH HOH . 
F 3 HOH B 9 282 282 HOH HOH . 
F 3 HOH B 10 283 256 HOH HOH . 
F 3 HOH B 11 284 259 HOH HOH . 
F 3 HOH B 12 285 285 HOH HOH . 
F 3 HOH B 13 286 262 HOH HOH . 
F 3 HOH B 14 287 287 HOH HOH . 
F 3 HOH B 15 288 265 HOH HOH . 
F 3 HOH B 16 289 266 HOH HOH . 
F 3 HOH B 17 290 271 HOH HOH . 
F 3 HOH B 18 291 272 HOH HOH . 
F 3 HOH B 19 292 273 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 3NY . . . D 2 1.161 6.561 51.667 1 20 ? N1 3NY 273 B 1 
HETATM 2 N N2 3NY . . . D 2 -0.06 6.732 51.731 1 20 ? N2 3NY 273 B 1 
HETATM 3 N N3 3NY . . . D 2 -0.725 5.697 51.578 1 20 ? N3 3NY 273 B 1 
HETATM 4 C C4 3NY . . . D 2 -0.024 3.317 51.168 1 20 ? C4 3NY 273 B 1 
HETATM 5 C C5 3NY . . . D 2 1.129 2.522 51.005 1 20 ? C5 3NY 273 B 1 
HETATM 6 C C6 3NY . . . D 2 2.411 3.12 51.074 1 20 ? C6 3NY 273 B 1 
HETATM 7 C C7 3NY . . . D 2 2.564 4.499 51.294 1 20 ? C7 3NY 273 B 1 
HETATM 8 O O11 3NY . . . D 2 -0.27 0.581 50.711 1 20 ? O11 3NY 273 B 1 
HETATM 9 O O21 3NY . . . D 2 2.154 0.367 50.624 1 20 ? O21 3NY 273 B 1 
HETATM 10 C C3A 3NY . . . D 2 0.115 4.693 51.387 1 20 ? C3A 3NY 273 B 1 
HETATM 11 C C7A 3NY . . . D 2 1.394 5.27 51.453 1 20 ? C7A 3NY 273 B 1 
HETATM 12 N NO1 3NY . . . D 2 1.007 1.205 50.795 1 20 ? NO1 3NY 273 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#