data_3Q30 # _model_server_result.job_id QkN_25ik3sn5Fg8L0ePrdQ _model_server_result.datetime_utc '2024-11-04 18:34:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q30 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 3Q30 # _exptl.entry_id 3Q30 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.71 _cell.angle_gamma 90 _cell.entry_id 3Q30 _cell.length_a 85.973 _cell.length_b 59.526 _cell.length_c 84.139 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q30 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 50 A ASP 80 1_555 B MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A OD2 ASP 50 A ASP 80 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc3 A OE1 GLU 53 A GLU 83 1_555 B MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc4 A OD1 ASP 54 A ASP 84 1_555 B MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc5 A OD2 ASP 54 A ASP 84 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc6 F O HOH . A HOH 461 1_555 B MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc7 F O HOH . A HOH 506 1_555 B MG MG . A MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 F O HOH . A HOH 599 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc9 B MG MG . A MG 600 1_555 D O43 D61 . A D61 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc10 C MG MG . A MG 601 1_555 D O43 D61 . A D61 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc11 C MG MG . A MG 601 1_555 D O41 D61 . A D61 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc12 C MG MG . A MG 601 1_555 D O37 D61 . A D61 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 348 n n P O2 PO4 sing 349 n n P O3 PO4 sing 350 n n P O4 PO4 sing 351 n n # _atom_sites.entry_id 3Q30 _atom_sites.fract_transf_matrix[1][1] 0.011632 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0056 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 600 600 MG MG . C 2 MG A 1 601 601 MG MG . D 3 D61 A 1 700 700 D61 D61 . E 4 PO4 A 1 1 1 PO4 PO4 . F 5 HOH A 1 2 2 HOH HOH . F 5 HOH A 2 3 3 HOH HOH . F 5 HOH A 3 4 4 HOH HOH . F 5 HOH A 4 5 5 HOH HOH . F 5 HOH A 5 6 6 HOH HOH . F 5 HOH A 6 7 7 HOH HOH . F 5 HOH A 7 8 8 HOH HOH . F 5 HOH A 8 9 9 HOH HOH . F 5 HOH A 9 11 11 HOH HOH . F 5 HOH A 10 12 12 HOH HOH . F 5 HOH A 11 13 13 HOH HOH . F 5 HOH A 12 14 14 HOH HOH . F 5 HOH A 13 15 15 HOH HOH . F 5 HOH A 14 16 16 HOH HOH . F 5 HOH A 15 17 17 HOH HOH . F 5 HOH A 16 19 19 HOH HOH . F 5 HOH A 17 20 20 HOH HOH . F 5 HOH A 18 21 21 HOH HOH . F 5 HOH A 19 22 22 HOH HOH . F 5 HOH A 20 24 24 HOH HOH . F 5 HOH A 21 25 25 HOH HOH . F 5 HOH A 22 26 26 HOH HOH . F 5 HOH A 23 27 27 HOH HOH . F 5 HOH A 24 28 28 HOH HOH . F 5 HOH A 25 29 29 HOH HOH . F 5 HOH A 26 30 30 HOH HOH . F 5 HOH A 27 371 1 HOH HOH . F 5 HOH A 28 372 31 HOH HOH . F 5 HOH A 29 373 32 HOH HOH . F 5 HOH A 30 374 33 HOH HOH . F 5 HOH A 31 375 34 HOH HOH . F 5 HOH A 32 376 35 HOH HOH . F 5 HOH A 33 377 37 HOH HOH . F 5 HOH A 34 378 38 HOH HOH . F 5 HOH A 35 379 39 HOH HOH . F 5 HOH A 36 380 40 HOH HOH . F 5 HOH A 37 381 41 HOH HOH . F 5 HOH A 38 382 42 HOH HOH . F 5 HOH A 39 383 43 HOH HOH . F 5 HOH A 40 384 44 HOH HOH . F 5 HOH A 41 385 45 HOH HOH . F 5 HOH A 42 386 46 HOH HOH . F 5 HOH A 43 387 47 HOH HOH . F 5 HOH A 44 388 48 HOH HOH . F 5 HOH A 45 389 49 HOH HOH . F 5 HOH A 46 390 50 HOH HOH . F 5 HOH A 47 391 51 HOH HOH . F 5 HOH A 48 392 52 HOH HOH . F 5 HOH A 49 393 53 HOH HOH . F 5 HOH A 50 394 54 HOH HOH . F 5 HOH A 51 395 55 HOH HOH . F 5 HOH A 52 396 56 HOH HOH . F 5 HOH A 53 397 57 HOH HOH . F 5 HOH A 54 398 58 HOH HOH . F 5 HOH A 55 399 59 HOH HOH . F 5 HOH A 56 400 60 HOH HOH . F 5 HOH A 57 401 61 HOH HOH . F 5 HOH A 58 402 62 HOH HOH . F 5 HOH A 59 403 63 HOH HOH . F 5 HOH A 60 404 64 HOH HOH . F 5 HOH A 61 405 65 HOH HOH . F 5 HOH A 62 406 66 HOH HOH . F 5 HOH A 63 407 67 HOH HOH . F 5 HOH A 64 408 68 HOH HOH . F 5 HOH A 65 409 69 HOH HOH . F 5 HOH A 66 410 70 HOH HOH . F 5 HOH A 67 411 71 HOH HOH . F 5 HOH A 68 412 72 HOH HOH . F 5 HOH A 69 413 73 HOH HOH . F 5 HOH A 70 414 74 HOH HOH . F 5 HOH A 71 415 75 HOH HOH . F 5 HOH A 72 416 76 HOH HOH . F 5 HOH A 73 417 77 HOH HOH . F 5 HOH A 74 418 78 HOH HOH . F 5 HOH A 75 419 79 HOH HOH . F 5 HOH A 76 420 80 HOH HOH . F 5 HOH A 77 421 81 HOH HOH . F 5 HOH A 78 422 82 HOH HOH . F 5 HOH A 79 423 83 HOH HOH . F 5 HOH A 80 424 84 HOH HOH . F 5 HOH A 81 425 85 HOH HOH . F 5 HOH A 82 426 86 HOH HOH . F 5 HOH A 83 427 87 HOH HOH . F 5 HOH A 84 428 88 HOH HOH . F 5 HOH A 85 429 89 HOH HOH . F 5 HOH A 86 430 90 HOH HOH . F 5 HOH A 87 431 91 HOH HOH . F 5 HOH A 88 432 92 HOH HOH . F 5 HOH A 89 433 93 HOH HOH . F 5 HOH A 90 434 94 HOH HOH . F 5 HOH A 91 435 95 HOH HOH . F 5 HOH A 92 436 97 HOH HOH . F 5 HOH A 93 437 98 HOH HOH . F 5 HOH A 94 438 99 HOH HOH . F 5 HOH A 95 439 100 HOH HOH . F 5 HOH A 96 440 101 HOH HOH . F 5 HOH A 97 441 102 HOH HOH . F 5 HOH A 98 442 103 HOH HOH . F 5 HOH A 99 443 104 HOH HOH . F 5 HOH A 100 444 105 HOH HOH . F 5 HOH A 101 445 106 HOH HOH . F 5 HOH A 102 446 107 HOH HOH . F 5 HOH A 103 447 108 HOH HOH . F 5 HOH A 104 448 109 HOH HOH . F 5 HOH A 105 449 110 HOH HOH . F 5 HOH A 106 450 111 HOH HOH . F 5 HOH A 107 451 112 HOH HOH . F 5 HOH A 108 452 113 HOH HOH . F 5 HOH A 109 453 114 HOH HOH . F 5 HOH A 110 454 115 HOH HOH . F 5 HOH A 111 455 117 HOH HOH . F 5 HOH A 112 456 118 HOH HOH . F 5 HOH A 113 457 119 HOH HOH . F 5 HOH A 114 458 120 HOH HOH . F 5 HOH A 115 459 121 HOH HOH . F 5 HOH A 116 460 122 HOH HOH . F 5 HOH A 117 461 123 HOH HOH . F 5 HOH A 118 462 125 HOH HOH . F 5 HOH A 119 463 126 HOH HOH . F 5 HOH A 120 464 127 HOH HOH . F 5 HOH A 121 465 128 HOH HOH . F 5 HOH A 122 466 129 HOH HOH . F 5 HOH A 123 467 130 HOH HOH . F 5 HOH A 124 468 131 HOH HOH . F 5 HOH A 125 469 132 HOH HOH . F 5 HOH A 126 470 133 HOH HOH . F 5 HOH A 127 471 134 HOH HOH . F 5 HOH A 128 472 135 HOH HOH . F 5 HOH A 129 473 136 HOH HOH . F 5 HOH A 130 474 137 HOH HOH . F 5 HOH A 131 475 140 HOH HOH . F 5 HOH A 132 476 141 HOH HOH . F 5 HOH A 133 477 142 HOH HOH . F 5 HOH A 134 478 143 HOH HOH . F 5 HOH A 135 479 144 HOH HOH . F 5 HOH A 136 480 145 HOH HOH . F 5 HOH A 137 481 146 HOH HOH . F 5 HOH A 138 482 147 HOH HOH . F 5 HOH A 139 483 148 HOH HOH . F 5 HOH A 140 484 149 HOH HOH . F 5 HOH A 141 485 150 HOH HOH . F 5 HOH A 142 486 152 HOH HOH . F 5 HOH A 143 487 153 HOH HOH . F 5 HOH A 144 488 155 HOH HOH . F 5 HOH A 145 489 156 HOH HOH . F 5 HOH A 146 490 157 HOH HOH . F 5 HOH A 147 491 158 HOH HOH . F 5 HOH A 148 492 159 HOH HOH . F 5 HOH A 149 493 160 HOH HOH . F 5 HOH A 150 494 161 HOH HOH . F 5 HOH A 151 495 162 HOH HOH . F 5 HOH A 152 496 163 HOH HOH . F 5 HOH A 153 497 164 HOH HOH . F 5 HOH A 154 498 165 HOH HOH . F 5 HOH A 155 499 166 HOH HOH . F 5 HOH A 156 500 168 HOH HOH . F 5 HOH A 157 501 170 HOH HOH . F 5 HOH A 158 502 171 HOH HOH . F 5 HOH A 159 503 172 HOH HOH . F 5 HOH A 160 504 173 HOH HOH . F 5 HOH A 161 505 174 HOH HOH . F 5 HOH A 162 506 176 HOH HOH . F 5 HOH A 163 507 177 HOH HOH . F 5 HOH A 164 508 178 HOH HOH . F 5 HOH A 165 509 179 HOH HOH . F 5 HOH A 166 510 180 HOH HOH . F 5 HOH A 167 511 182 HOH HOH . F 5 HOH A 168 512 183 HOH HOH . F 5 HOH A 169 513 184 HOH HOH . F 5 HOH A 170 514 185 HOH HOH . F 5 HOH A 171 515 186 HOH HOH . F 5 HOH A 172 516 187 HOH HOH . F 5 HOH A 173 517 188 HOH HOH . F 5 HOH A 174 518 189 HOH HOH . F 5 HOH A 175 519 190 HOH HOH . F 5 HOH A 176 520 191 HOH HOH . F 5 HOH A 177 521 192 HOH HOH . F 5 HOH A 178 522 193 HOH HOH . F 5 HOH A 179 523 194 HOH HOH . F 5 HOH A 180 524 195 HOH HOH . F 5 HOH A 181 525 196 HOH HOH . F 5 HOH A 182 526 197 HOH HOH . F 5 HOH A 183 527 198 HOH HOH . F 5 HOH A 184 528 199 HOH HOH . F 5 HOH A 185 529 201 HOH HOH . F 5 HOH A 186 530 203 HOH HOH . F 5 HOH A 187 531 204 HOH HOH . F 5 HOH A 188 532 205 HOH HOH . F 5 HOH A 189 533 206 HOH HOH . F 5 HOH A 190 534 207 HOH HOH . F 5 HOH A 191 535 208 HOH HOH . F 5 HOH A 192 536 209 HOH HOH . F 5 HOH A 193 537 210 HOH HOH . F 5 HOH A 194 538 211 HOH HOH . F 5 HOH A 195 539 213 HOH HOH . F 5 HOH A 196 540 214 HOH HOH . F 5 HOH A 197 541 215 HOH HOH . F 5 HOH A 198 542 216 HOH HOH . F 5 HOH A 199 543 217 HOH HOH . F 5 HOH A 200 544 218 HOH HOH . F 5 HOH A 201 545 219 HOH HOH . F 5 HOH A 202 546 220 HOH HOH . F 5 HOH A 203 547 223 HOH HOH . F 5 HOH A 204 548 224 HOH HOH . F 5 HOH A 205 549 225 HOH HOH . F 5 HOH A 206 550 226 HOH HOH . F 5 HOH A 207 551 227 HOH HOH . F 5 HOH A 208 552 228 HOH HOH . F 5 HOH A 209 553 229 HOH HOH . F 5 HOH A 210 554 230 HOH HOH . F 5 HOH A 211 555 231 HOH HOH . F 5 HOH A 212 556 235 HOH HOH . F 5 HOH A 213 557 236 HOH HOH . F 5 HOH A 214 558 237 HOH HOH . F 5 HOH A 215 559 238 HOH HOH . F 5 HOH A 216 560 239 HOH HOH . F 5 HOH A 217 561 242 HOH HOH . F 5 HOH A 218 562 243 HOH HOH . F 5 HOH A 219 563 244 HOH HOH . F 5 HOH A 220 564 245 HOH HOH . F 5 HOH A 221 565 246 HOH HOH . F 5 HOH A 222 566 247 HOH HOH . F 5 HOH A 223 567 248 HOH HOH . F 5 HOH A 224 568 250 HOH HOH . F 5 HOH A 225 569 251 HOH HOH . F 5 HOH A 226 570 252 HOH HOH . F 5 HOH A 227 571 253 HOH HOH . F 5 HOH A 228 572 254 HOH HOH . F 5 HOH A 229 573 255 HOH HOH . F 5 HOH A 230 574 256 HOH HOH . F 5 HOH A 231 575 257 HOH HOH . F 5 HOH A 232 576 258 HOH HOH . F 5 HOH A 233 577 259 HOH HOH . F 5 HOH A 234 578 260 HOH HOH . F 5 HOH A 235 579 262 HOH HOH . F 5 HOH A 236 580 263 HOH HOH . F 5 HOH A 237 581 265 HOH HOH . F 5 HOH A 238 582 266 HOH HOH . F 5 HOH A 239 583 267 HOH HOH . F 5 HOH A 240 584 268 HOH HOH . F 5 HOH A 241 585 269 HOH HOH . F 5 HOH A 242 586 270 HOH HOH . F 5 HOH A 243 587 271 HOH HOH . F 5 HOH A 244 588 272 HOH HOH . F 5 HOH A 245 589 273 HOH HOH . F 5 HOH A 246 590 274 HOH HOH . F 5 HOH A 247 591 275 HOH HOH . F 5 HOH A 248 592 276 HOH HOH . F 5 HOH A 249 593 277 HOH HOH . F 5 HOH A 250 594 278 HOH HOH . F 5 HOH A 251 595 279 HOH HOH . F 5 HOH A 252 596 280 HOH HOH . F 5 HOH A 253 597 281 HOH HOH . F 5 HOH A 254 598 282 HOH HOH . F 5 HOH A 255 599 283 HOH HOH . F 5 HOH A 256 602 284 HOH HOH . F 5 HOH A 257 603 285 HOH HOH . F 5 HOH A 258 604 286 HOH HOH . F 5 HOH A 259 605 287 HOH HOH . F 5 HOH A 260 606 288 HOH HOH . F 5 HOH A 261 607 289 HOH HOH . F 5 HOH A 262 608 290 HOH HOH . F 5 HOH A 263 609 291 HOH HOH . F 5 HOH A 264 610 292 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 4 25.446 -10.076 40.245 1 22.81 ? P PO4 1 A 1 HETATM 2 O O1 PO4 . . . E 4 24.488 -9.604 39.157 1 23.44 ? O1 PO4 1 A 1 HETATM 3 O O2 PO4 . . . E 4 26.545 -10.986 39.732 1 21.88 ? O2 PO4 1 A 1 HETATM 4 O O3 PO4 . . . E 4 26.031 -8.855 40.886 1 24.02 ? O3 PO4 1 A 1 HETATM 5 O O4 PO4 . . . E 4 24.522 -10.771 41.207 1 23.01 ? O4 PO4 1 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #