data_3Q36 # _model_server_result.job_id fPtAbsClgQixVx434LCtUw _model_server_result.datetime_utc '2024-11-25 16:29:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":458}' # _entry.id 3Q36 # _exptl.entry_id 3Q36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.65 _cell.angle_gamma 90 _cell.entry_id 3Q36 _cell.length_a 126.476 _cell.length_b 83.724 _cell.length_c 47.561 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 22 A CYS 287 1_555 C FE4 SF4 . A SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc2 A SG CYS 102 A CYS 367 1_555 C FE1 SF4 . A SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc3 A SG CYS 119 A CYS 384 1_555 C FE2 SF4 . A SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc4 A SG CYS 159 A CYS 424 1_555 C FE3 SF4 . A SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc5 B SG CYS 22 B CYS 287 1_555 D FE4 SF4 . B SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc6 B SG CYS 102 B CYS 367 1_555 D FE1 SF4 . B SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc7 B SG CYS 119 B CYS 384 1_555 D FE2 SF4 . B SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc8 B SG CYS 159 B CYS 424 1_555 D FE3 SF4 . B SF4 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 3Q36 _atom_sites.fract_transf_matrix[1][1] 0.007907 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001062 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 458 456 SF4 SF4 . D 2 SF4 B 1 458 456 SF4 SF4 . E 3 FE B 1 1 1 FE FE . F 4 HOH A 1 1 1 HOH HOH . F 4 HOH A 2 2 2 HOH HOH . F 4 HOH A 3 4 4 HOH HOH . F 4 HOH A 4 5 5 HOH HOH . F 4 HOH A 5 9 9 HOH HOH . F 4 HOH A 6 11 11 HOH HOH . F 4 HOH A 7 13 13 HOH HOH . F 4 HOH A 8 14 14 HOH HOH . F 4 HOH A 9 16 16 HOH HOH . F 4 HOH A 10 17 17 HOH HOH . F 4 HOH A 11 18 18 HOH HOH . F 4 HOH A 12 19 19 HOH HOH . F 4 HOH A 13 20 20 HOH HOH . F 4 HOH A 14 21 21 HOH HOH . G 4 HOH B 1 3 3 HOH HOH . G 4 HOH B 2 6 6 HOH HOH . G 4 HOH B 3 7 7 HOH HOH . G 4 HOH B 4 8 8 HOH HOH . G 4 HOH B 5 10 10 HOH HOH . G 4 HOH B 6 12 12 HOH HOH . G 4 HOH B 7 15 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . D 2 -17.188 18.548 42.721 1 32.91 ? FE1 SF4 458 B 1 HETATM 2 FE FE2 SF4 . . . D 2 -19.342 18.1 40.859 1 30.89 ? FE2 SF4 458 B 1 HETATM 3 FE FE3 SF4 . . . D 2 -16.659 18.971 39.831 1 31 ? FE3 SF4 458 B 1 HETATM 4 FE FE4 SF4 . . . D 2 -18.516 21.038 41.495 1 28.76 ? FE4 SF4 458 B 1 HETATM 5 S S1 SF4 . . . D 2 -18.672 19.838 39.707 1 29.79 ? S1 SF4 458 B 1 HETATM 6 S S2 SF4 . . . D 2 -16.505 20.281 41.581 1 29.33 ? S2 SF4 458 B 1 HETATM 7 S S3 SF4 . . . D 2 -19.207 19.422 42.632 1 28.07 ? S3 SF4 458 B 1 HETATM 8 S S4 SF4 . . . D 2 -17.345 17.32 40.954 1 30.03 ? S4 SF4 458 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 8 #