data_3Q3I # _model_server_result.job_id SLrqczF5bBEauqQzKaQN8A _model_server_result.datetime_utc '2024-11-12 19:56:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q3i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":622}' # _entry.id 3Q3I # _exptl.entry_id 3Q3I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3Q3I _cell.length_a 79.701 _cell.length_b 93.262 _cell.length_c 176.705 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3Q3I _atom_sites.fract_transf_matrix[1][1] 0.012547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 621 621 GOL GOL . D 2 GOL A 1 622 622 GOL GOL . E 2 GOL B 1 621 621 GOL GOL . F 2 GOL B 1 622 622 GOL GOL . G 3 HOH A 1 623 623 HOH HOH . G 3 HOH A 2 624 624 HOH HOH . G 3 HOH A 3 625 625 HOH HOH . G 3 HOH A 4 626 626 HOH HOH . G 3 HOH A 5 627 627 HOH HOH . G 3 HOH A 6 628 628 HOH HOH . G 3 HOH A 7 629 629 HOH HOH . G 3 HOH A 8 630 630 HOH HOH . G 3 HOH A 9 631 631 HOH HOH . G 3 HOH A 10 632 632 HOH HOH . G 3 HOH A 11 633 633 HOH HOH . G 3 HOH A 12 634 634 HOH HOH . G 3 HOH A 13 635 635 HOH HOH . G 3 HOH A 14 636 636 HOH HOH . G 3 HOH A 15 637 637 HOH HOH . G 3 HOH A 16 638 638 HOH HOH . G 3 HOH A 17 639 639 HOH HOH . G 3 HOH A 18 640 640 HOH HOH . G 3 HOH A 19 641 641 HOH HOH . G 3 HOH A 20 642 642 HOH HOH . G 3 HOH A 21 643 643 HOH HOH . G 3 HOH A 22 644 644 HOH HOH . G 3 HOH A 23 645 645 HOH HOH . G 3 HOH A 24 646 646 HOH HOH . G 3 HOH A 25 647 647 HOH HOH . G 3 HOH A 26 648 648 HOH HOH . G 3 HOH A 27 649 649 HOH HOH . G 3 HOH A 28 650 650 HOH HOH . G 3 HOH A 29 651 651 HOH HOH . G 3 HOH A 30 652 652 HOH HOH . G 3 HOH A 31 653 653 HOH HOH . G 3 HOH A 32 654 654 HOH HOH . G 3 HOH A 33 655 655 HOH HOH . G 3 HOH A 34 656 656 HOH HOH . G 3 HOH A 35 657 657 HOH HOH . G 3 HOH A 36 658 658 HOH HOH . G 3 HOH A 37 659 659 HOH HOH . G 3 HOH A 38 660 660 HOH HOH . G 3 HOH A 39 661 661 HOH HOH . G 3 HOH A 40 662 662 HOH HOH . G 3 HOH A 41 663 663 HOH HOH . G 3 HOH A 42 664 664 HOH HOH . G 3 HOH A 43 665 665 HOH HOH . G 3 HOH A 44 666 666 HOH HOH . G 3 HOH A 45 667 667 HOH HOH . G 3 HOH A 46 668 668 HOH HOH . G 3 HOH A 47 669 669 HOH HOH . G 3 HOH A 48 670 670 HOH HOH . G 3 HOH A 49 671 671 HOH HOH . G 3 HOH A 50 672 672 HOH HOH . G 3 HOH A 51 673 673 HOH HOH . G 3 HOH A 52 674 674 HOH HOH . G 3 HOH A 53 675 675 HOH HOH . G 3 HOH A 54 676 676 HOH HOH . G 3 HOH A 55 677 677 HOH HOH . G 3 HOH A 56 678 678 HOH HOH . G 3 HOH A 57 679 679 HOH HOH . G 3 HOH A 58 680 680 HOH HOH . G 3 HOH A 59 681 681 HOH HOH . G 3 HOH A 60 682 682 HOH HOH . G 3 HOH A 61 683 683 HOH HOH . G 3 HOH A 62 684 684 HOH HOH . G 3 HOH A 63 685 685 HOH HOH . G 3 HOH A 64 686 686 HOH HOH . G 3 HOH A 65 687 687 HOH HOH . G 3 HOH A 66 688 688 HOH HOH . G 3 HOH A 67 689 689 HOH HOH . G 3 HOH A 68 690 690 HOH HOH . G 3 HOH A 69 691 691 HOH HOH . G 3 HOH A 70 692 692 HOH HOH . G 3 HOH A 71 693 693 HOH HOH . G 3 HOH A 72 694 694 HOH HOH . G 3 HOH A 73 695 695 HOH HOH . G 3 HOH A 74 696 696 HOH HOH . H 3 HOH B 1 623 623 HOH HOH . H 3 HOH B 2 624 624 HOH HOH . H 3 HOH B 3 625 625 HOH HOH . H 3 HOH B 4 626 626 HOH HOH . H 3 HOH B 5 627 627 HOH HOH . H 3 HOH B 6 628 628 HOH HOH . H 3 HOH B 7 629 629 HOH HOH . H 3 HOH B 8 630 630 HOH HOH . H 3 HOH B 9 631 631 HOH HOH . H 3 HOH B 10 632 632 HOH HOH . H 3 HOH B 11 633 633 HOH HOH . H 3 HOH B 12 634 634 HOH HOH . H 3 HOH B 13 635 635 HOH HOH . H 3 HOH B 14 636 636 HOH HOH . H 3 HOH B 15 637 637 HOH HOH . H 3 HOH B 16 638 638 HOH HOH . H 3 HOH B 17 639 639 HOH HOH . H 3 HOH B 18 640 640 HOH HOH . H 3 HOH B 19 641 641 HOH HOH . H 3 HOH B 20 642 642 HOH HOH . H 3 HOH B 21 643 643 HOH HOH . H 3 HOH B 22 644 644 HOH HOH . H 3 HOH B 23 645 645 HOH HOH . H 3 HOH B 24 646 646 HOH HOH . H 3 HOH B 25 647 647 HOH HOH . H 3 HOH B 26 648 648 HOH HOH . H 3 HOH B 27 649 649 HOH HOH . H 3 HOH B 28 650 650 HOH HOH . H 3 HOH B 29 651 651 HOH HOH . H 3 HOH B 30 652 652 HOH HOH . H 3 HOH B 31 653 653 HOH HOH . H 3 HOH B 32 654 654 HOH HOH . H 3 HOH B 33 655 655 HOH HOH . H 3 HOH B 34 656 656 HOH HOH . H 3 HOH B 35 657 657 HOH HOH . H 3 HOH B 36 658 658 HOH HOH . H 3 HOH B 37 659 659 HOH HOH . H 3 HOH B 38 660 660 HOH HOH . H 3 HOH B 39 661 661 HOH HOH . H 3 HOH B 40 662 662 HOH HOH . H 3 HOH B 41 663 663 HOH HOH . H 3 HOH B 42 664 664 HOH HOH . H 3 HOH B 43 665 665 HOH HOH . H 3 HOH B 44 666 666 HOH HOH . H 3 HOH B 45 667 667 HOH HOH . H 3 HOH B 46 668 668 HOH HOH . H 3 HOH B 47 669 669 HOH HOH . H 3 HOH B 48 670 670 HOH HOH . H 3 HOH B 49 671 671 HOH HOH . H 3 HOH B 50 672 672 HOH HOH . H 3 HOH B 51 673 673 HOH HOH . H 3 HOH B 52 674 674 HOH HOH . H 3 HOH B 53 675 675 HOH HOH . H 3 HOH B 54 676 676 HOH HOH . H 3 HOH B 55 677 677 HOH HOH . H 3 HOH B 56 678 678 HOH HOH . H 3 HOH B 57 679 679 HOH HOH . H 3 HOH B 58 680 680 HOH HOH . H 3 HOH B 59 681 681 HOH HOH . H 3 HOH B 60 682 682 HOH HOH . H 3 HOH B 61 683 683 HOH HOH . H 3 HOH B 62 684 684 HOH HOH . H 3 HOH B 63 685 685 HOH HOH . H 3 HOH B 64 686 686 HOH HOH . H 3 HOH B 65 687 687 HOH HOH . H 3 HOH B 66 688 688 HOH HOH . H 3 HOH B 67 689 689 HOH HOH . H 3 HOH B 68 690 690 HOH HOH . H 3 HOH B 69 691 691 HOH HOH . H 3 HOH B 70 692 692 HOH HOH . H 3 HOH B 71 693 693 HOH HOH . H 3 HOH B 72 694 694 HOH HOH . H 3 HOH B 73 695 695 HOH HOH . H 3 HOH B 74 696 696 HOH HOH . H 3 HOH B 75 697 697 HOH HOH . H 3 HOH B 76 698 698 HOH HOH . H 3 HOH B 77 699 699 HOH HOH . H 3 HOH B 78 700 700 HOH HOH . H 3 HOH B 79 701 701 HOH HOH . H 3 HOH B 80 702 702 HOH HOH . H 3 HOH B 81 703 703 HOH HOH . H 3 HOH B 82 704 704 HOH HOH . H 3 HOH B 83 705 705 HOH HOH . H 3 HOH B 84 706 706 HOH HOH . H 3 HOH B 85 707 707 HOH HOH . H 3 HOH B 86 708 708 HOH HOH . H 3 HOH B 87 709 709 HOH HOH . H 3 HOH B 88 710 710 HOH HOH . H 3 HOH B 89 711 711 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 2.878 -0.755 0.958 1 47.28 ? C1 GOL 622 A 1 HETATM 2 O O1 GOL . . . D 2 2.243 0.244 1.717 1 48.77 ? O1 GOL 622 A 1 HETATM 3 C C2 GOL . . . D 2 2.79 -2.085 1.704 1 47.35 ? C2 GOL 622 A 1 HETATM 4 O O2 GOL . . . D 2 3.963 -2.237 2.492 1 49.3 ? O2 GOL 622 A 1 HETATM 5 C C3 GOL . . . D 2 1.523 -2.116 2.555 1 45.44 ? C3 GOL 622 A 1 HETATM 6 O O3 GOL . . . D 2 1.09 -3.419 2.905 1 44.8 ? O3 GOL 622 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #