data_3Q41 # _model_server_result.job_id MaZjAEzHiZwz0lUcPaAlBg _model_server_result.datetime_utc '2024-11-05 00:32:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q41 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1}' # _entry.id 3Q41 # _exptl.entry_id 3Q41 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3Q41 _cell.length_a 164.679 _cell.length_b 164.679 _cell.length_c 147.258 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q41 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,AA,BA 1 1 C,T,U,V,W,X,Y,Z,CA 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 R N N ? 3 S N N ? 3 Y N N ? 3 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 79 1_555 A SG CYS 288 A CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 B SG CYS 59 B CYS 79 1_555 B SG CYS 288 B CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 C SG CYS 59 C CYS 79 1_555 C SG CYS 288 C CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? covale ? covale1 A ND2 ASN 41 A ASN 61 1_555 D C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale2 A ND2 ASN 183 A ASN 203 1_555 E C1 NAG . A NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 A ND2 ASN 219 A ASN 239 1_555 F C1 NAG . A NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale4 A ND2 ASN 256 A ASN 276 1_555 G C1 NAG . A NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale5 A ND2 ASN 348 A ASN 368 1_555 H C1 NAG . A NAG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale6 B ND2 ASN 41 B ASN 61 1_555 M C1 NAG . B NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale7 B ND2 ASN 183 B ASN 203 1_555 N C1 NAG . B NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale8 B ND2 ASN 219 B ASN 239 1_555 O C1 NAG . B NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale9 B ND2 ASN 256 B ASN 276 1_555 P C1 NAG . B NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale10 B ND2 ASN 348 B ASN 368 1_555 Q C1 NAG . B NAG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale11 C ND2 ASN 41 C ASN 61 1_555 T C1 NAG . C NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale12 C ND2 ASN 183 C ASN 203 1_555 U C1 NAG . C NAG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale13 C ND2 ASN 219 C ASN 239 1_555 V C1 NAG . C NAG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale14 C ND2 ASN 256 C ASN 276 1_555 W C1 NAG . C NAG 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale15 C ND2 ASN 348 C ASN 368 1_555 X C1 NAG . C NAG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3Q41 _atom_sites.fract_transf_matrix[1][1] 0.006072 _atom_sites.fract_transf_matrix[1][2] 0.003506 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NAG A 1 405 405 NAG NAG . E 2 NAG A 1 406 406 NAG NAG . F 2 NAG A 1 407 407 NAG NAG . G 2 NAG A 1 408 408 NAG NAG . H 2 NAG A 1 409 409 NAG NAG . I 3 CL A 1 1 1 CL CL . J 3 CL A 1 3 3 CL CL . K 3 CL A 1 4 4 CL CL . L 3 CL A 1 5 5 CL CL . M 2 NAG B 1 405 405 NAG NAG . N 2 NAG B 1 406 406 NAG NAG . O 2 NAG B 1 407 407 NAG NAG . P 2 NAG B 1 408 408 NAG NAG . Q 2 NAG B 1 409 409 NAG NAG . R 3 CL B 1 6 6 CL CL . S 3 CL B 1 7 7 CL CL . T 2 NAG C 1 405 405 NAG NAG . U 2 NAG C 1 406 406 NAG NAG . V 2 NAG C 1 407 407 NAG NAG . W 2 NAG C 1 408 408 NAG NAG . X 2 NAG C 1 409 409 NAG NAG . Y 3 CL C 1 2 2 CL CL . Z 3 CL C 1 8 8 CL CL . AA 4 HOH A 1 6 6 HOH HOH . AA 4 HOH A 2 7 7 HOH HOH . AA 4 HOH A 3 10 10 HOH HOH . AA 4 HOH A 4 11 11 HOH HOH . AA 4 HOH A 5 13 13 HOH HOH . AA 4 HOH A 6 19 19 HOH HOH . AA 4 HOH A 7 410 410 HOH HOH . BA 4 HOH B 1 2 2 HOH HOH . BA 4 HOH B 2 3 3 HOH HOH . BA 4 HOH B 3 4 4 HOH HOH . BA 4 HOH B 4 5 5 HOH HOH . BA 4 HOH B 5 9 9 HOH HOH . BA 4 HOH B 6 12 12 HOH HOH . BA 4 HOH B 7 14 14 HOH HOH . BA 4 HOH B 8 15 15 HOH HOH . BA 4 HOH B 9 18 18 HOH HOH . BA 4 HOH B 10 410 410 HOH HOH . CA 4 HOH C 1 1 1 HOH HOH . CA 4 HOH C 2 16 16 HOH HOH . CA 4 HOH C 3 17 17 HOH HOH . CA 4 HOH C 4 20 20 HOH HOH . CA 4 HOH C 5 410 410 HOH HOH . CA 4 HOH C 6 411 411 HOH HOH . CA 4 HOH C 7 412 412 HOH HOH . CA 4 HOH C 8 413 413 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x -13.74 _atom_site.Cartn_y -87.771 _atom_site.Cartn_z -14.1 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 90.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #