data_3Q53
#
_model_server_result.job_id            m1p3dw3olnVdkPS3KPQozw 
_model_server_result.datetime_utc      '2024-11-26 14:34:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q53 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":555}' 
#
_entry.id    3Q53 
#
_exptl.entry_id    3Q53 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3Q53 
_cell.length_a            48.982 
_cell.length_b            103.588 
_cell.length_c            121.967 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q53 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 175 A SER 422 1_555 A N TPO 176 A TPO 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? 
covale ? covale2 A C TPO 176 A TPO 423 1_555 A N MET 177 A MET 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
metalc ? metalc1 B O3B ATP . A ATP 1 1_555 C MG MG . A MG 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? 
metalc ? metalc2 B O3A ATP . A ATP 1 1_555 D MG MG . A MG 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? 
metalc ? metalc3 E O HOH . A HOH 84 1_555 D MG MG . A MG 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? 
metalc ? metalc4 E O HOH . A HOH 93 1_555 C MG MG . A MG 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? 
metalc ? metalc5 A OD1 ASN 147 A ASN 394 1_555 C MG MG . A MG 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? 
metalc ? metalc6 A OD2 ASP 160 A ASP 407 1_555 D MG MG . A MG 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3Q53 
_atom_sites.fract_transf_matrix[1][1]    0.020416 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009654 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008199 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 1 1 ATP ATP . 
C 3 MG A 1 554 1 MG MG . 
D 3 MG A 1 555 1 MG MG . 
E 4 HOH A 1 2 2 HOH HOH . 
E 4 HOH A 2 3 3 HOH HOH . 
E 4 HOH A 3 4 4 HOH HOH . 
E 4 HOH A 4 5 5 HOH HOH . 
E 4 HOH A 5 6 6 HOH HOH . 
E 4 HOH A 6 7 7 HOH HOH . 
E 4 HOH A 7 8 8 HOH HOH . 
E 4 HOH A 8 9 9 HOH HOH . 
E 4 HOH A 9 10 10 HOH HOH . 
E 4 HOH A 10 11 11 HOH HOH . 
E 4 HOH A 11 12 12 HOH HOH . 
E 4 HOH A 12 13 13 HOH HOH . 
E 4 HOH A 13 14 14 HOH HOH . 
E 4 HOH A 14 15 15 HOH HOH . 
E 4 HOH A 15 16 16 HOH HOH . 
E 4 HOH A 16 17 17 HOH HOH . 
E 4 HOH A 17 18 18 HOH HOH . 
E 4 HOH A 18 19 19 HOH HOH . 
E 4 HOH A 19 20 20 HOH HOH . 
E 4 HOH A 20 21 21 HOH HOH . 
E 4 HOH A 21 22 22 HOH HOH . 
E 4 HOH A 22 23 23 HOH HOH . 
E 4 HOH A 23 24 24 HOH HOH . 
E 4 HOH A 24 25 25 HOH HOH . 
E 4 HOH A 25 26 26 HOH HOH . 
E 4 HOH A 26 27 27 HOH HOH . 
E 4 HOH A 27 28 28 HOH HOH . 
E 4 HOH A 28 29 29 HOH HOH . 
E 4 HOH A 29 30 30 HOH HOH . 
E 4 HOH A 30 31 31 HOH HOH . 
E 4 HOH A 31 32 32 HOH HOH . 
E 4 HOH A 32 33 33 HOH HOH . 
E 4 HOH A 33 34 34 HOH HOH . 
E 4 HOH A 34 35 35 HOH HOH . 
E 4 HOH A 35 36 36 HOH HOH . 
E 4 HOH A 36 37 37 HOH HOH . 
E 4 HOH A 37 38 38 HOH HOH . 
E 4 HOH A 38 39 39 HOH HOH . 
E 4 HOH A 39 40 40 HOH HOH . 
E 4 HOH A 40 41 41 HOH HOH . 
E 4 HOH A 41 42 42 HOH HOH . 
E 4 HOH A 42 43 43 HOH HOH . 
E 4 HOH A 43 44 44 HOH HOH . 
E 4 HOH A 44 45 45 HOH HOH . 
E 4 HOH A 45 46 46 HOH HOH . 
E 4 HOH A 46 47 47 HOH HOH . 
E 4 HOH A 47 48 48 HOH HOH . 
E 4 HOH A 48 49 49 HOH HOH . 
E 4 HOH A 49 50 50 HOH HOH . 
E 4 HOH A 50 51 51 HOH HOH . 
E 4 HOH A 51 52 52 HOH HOH . 
E 4 HOH A 52 53 53 HOH HOH . 
E 4 HOH A 53 54 54 HOH HOH . 
E 4 HOH A 54 55 55 HOH HOH . 
E 4 HOH A 55 56 56 HOH HOH . 
E 4 HOH A 56 57 57 HOH HOH . 
E 4 HOH A 57 58 58 HOH HOH . 
E 4 HOH A 58 59 59 HOH HOH . 
E 4 HOH A 59 60 60 HOH HOH . 
E 4 HOH A 60 61 61 HOH HOH . 
E 4 HOH A 61 62 62 HOH HOH . 
E 4 HOH A 62 63 63 HOH HOH . 
E 4 HOH A 63 64 64 HOH HOH . 
E 4 HOH A 64 65 65 HOH HOH . 
E 4 HOH A 65 66 66 HOH HOH . 
E 4 HOH A 66 67 67 HOH HOH . 
E 4 HOH A 67 68 68 HOH HOH . 
E 4 HOH A 68 69 69 HOH HOH . 
E 4 HOH A 69 70 70 HOH HOH . 
E 4 HOH A 70 71 71 HOH HOH . 
E 4 HOH A 71 72 72 HOH HOH . 
E 4 HOH A 72 73 73 HOH HOH . 
E 4 HOH A 73 75 75 HOH HOH . 
E 4 HOH A 74 78 78 HOH HOH . 
E 4 HOH A 75 79 79 HOH HOH . 
E 4 HOH A 76 80 80 HOH HOH . 
E 4 HOH A 77 81 81 HOH HOH . 
E 4 HOH A 78 82 82 HOH HOH . 
E 4 HOH A 79 83 83 HOH HOH . 
E 4 HOH A 80 84 84 HOH HOH . 
E 4 HOH A 81 85 85 HOH HOH . 
E 4 HOH A 82 86 86 HOH HOH . 
E 4 HOH A 83 87 87 HOH HOH . 
E 4 HOH A 84 88 88 HOH HOH . 
E 4 HOH A 85 89 89 HOH HOH . 
E 4 HOH A 86 90 90 HOH HOH . 
E 4 HOH A 87 91 91 HOH HOH . 
E 4 HOH A 88 92 92 HOH HOH . 
E 4 HOH A 89 93 93 HOH HOH . 
E 4 HOH A 90 94 94 HOH HOH . 
E 4 HOH A 91 95 95 HOH HOH . 
E 4 HOH A 92 96 96 HOH HOH . 
E 4 HOH A 93 97 97 HOH HOH . 
E 4 HOH A 94 98 98 HOH HOH . 
E 4 HOH A 95 99 99 HOH HOH . 
E 4 HOH A 96 100 100 HOH HOH . 
E 4 HOH A 97 101 101 HOH HOH . 
E 4 HOH A 98 102 102 HOH HOH . 
E 4 HOH A 99 103 103 HOH HOH . 
E 4 HOH A 100 104 104 HOH HOH . 
E 4 HOH A 101 105 105 HOH HOH . 
E 4 HOH A 102 109 109 HOH HOH . 
E 4 HOH A 103 110 110 HOH HOH . 
E 4 HOH A 104 111 111 HOH HOH . 
E 4 HOH A 105 112 112 HOH HOH . 
E 4 HOH A 106 113 113 HOH HOH . 
E 4 HOH A 107 114 114 HOH HOH . 
E 4 HOH A 108 115 115 HOH HOH . 
E 4 HOH A 109 116 116 HOH HOH . 
E 4 HOH A 110 118 118 HOH HOH . 
E 4 HOH A 111 119 119 HOH HOH . 
E 4 HOH A 112 120 120 HOH HOH . 
E 4 HOH A 113 121 121 HOH HOH . 
E 4 HOH A 114 123 123 HOH HOH . 
E 4 HOH A 115 124 124 HOH HOH . 
E 4 HOH A 116 126 126 HOH HOH . 
E 4 HOH A 117 127 127 HOH HOH . 
E 4 HOH A 118 128 128 HOH HOH . 
E 4 HOH A 119 129 129 HOH HOH . 
E 4 HOH A 120 130 130 HOH HOH . 
E 4 HOH A 121 131 131 HOH HOH . 
E 4 HOH A 122 132 132 HOH HOH . 
E 4 HOH A 123 133 133 HOH HOH . 
E 4 HOH A 124 134 134 HOH HOH . 
E 4 HOH A 125 135 135 HOH HOH . 
E 4 HOH A 126 136 136 HOH HOH . 
E 4 HOH A 127 137 137 HOH HOH . 
E 4 HOH A 128 138 138 HOH HOH . 
E 4 HOH A 129 139 139 HOH HOH . 
E 4 HOH A 130 140 140 HOH HOH . 
E 4 HOH A 131 141 141 HOH HOH . 
E 4 HOH A 132 142 142 HOH HOH . 
E 4 HOH A 133 143 143 HOH HOH . 
E 4 HOH A 134 145 145 HOH HOH . 
E 4 HOH A 135 146 146 HOH HOH . 
E 4 HOH A 136 147 147 HOH HOH . 
E 4 HOH A 137 148 148 HOH HOH . 
E 4 HOH A 138 149 149 HOH HOH . 
E 4 HOH A 139 150 150 HOH HOH . 
E 4 HOH A 140 151 151 HOH HOH . 
E 4 HOH A 141 152 152 HOH HOH . 
E 4 HOH A 142 153 153 HOH HOH . 
E 4 HOH A 143 154 154 HOH HOH . 
E 4 HOH A 144 155 155 HOH HOH . 
E 4 HOH A 145 156 156 HOH HOH . 
E 4 HOH A 146 157 157 HOH HOH . 
E 4 HOH A 147 158 158 HOH HOH . 
E 4 HOH A 148 159 159 HOH HOH . 
E 4 HOH A 149 160 160 HOH HOH . 
E 4 HOH A 150 161 161 HOH HOH . 
E 4 HOH A 151 162 162 HOH HOH . 
E 4 HOH A 152 163 163 HOH HOH . 
E 4 HOH A 153 164 164 HOH HOH . 
E 4 HOH A 154 166 166 HOH HOH . 
E 4 HOH A 155 167 167 HOH HOH . 
E 4 HOH A 156 168 168 HOH HOH . 
E 4 HOH A 157 169 169 HOH HOH . 
E 4 HOH A 158 171 171 HOH HOH . 
E 4 HOH A 159 172 172 HOH HOH . 
E 4 HOH A 160 173 173 HOH HOH . 
E 4 HOH A 161 174 174 HOH HOH . 
E 4 HOH A 162 175 175 HOH HOH . 
E 4 HOH A 163 176 176 HOH HOH . 
E 4 HOH A 164 177 177 HOH HOH . 
E 4 HOH A 165 178 178 HOH HOH . 
E 4 HOH A 166 179 179 HOH HOH . 
E 4 HOH A 167 180 180 HOH HOH . 
E 4 HOH A 168 181 181 HOH HOH . 
E 4 HOH A 169 182 182 HOH HOH . 
E 4 HOH A 170 183 183 HOH HOH . 
E 4 HOH A 171 184 184 HOH HOH . 
E 4 HOH A 172 185 185 HOH HOH . 
E 4 HOH A 173 186 186 HOH HOH . 
E 4 HOH A 174 187 187 HOH HOH . 
E 4 HOH A 175 188 188 HOH HOH . 
E 4 HOH A 176 193 193 HOH HOH . 
E 4 HOH A 177 194 194 HOH HOH . 
E 4 HOH A 178 195 195 HOH HOH . 
E 4 HOH A 179 196 196 HOH HOH . 
E 4 HOH A 180 197 197 HOH HOH . 
E 4 HOH A 181 198 198 HOH HOH . 
E 4 HOH A 182 199 199 HOH HOH . 
E 4 HOH A 183 200 200 HOH HOH . 
E 4 HOH A 184 201 201 HOH HOH . 
E 4 HOH A 185 556 1 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -14.358 
_atom_site.Cartn_y               -30.758 
_atom_site.Cartn_z               17.468 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        64.87 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           555 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#