data_3Q5L
#
_model_server_result.job_id            MULAM-E1WoqTSaZMANpHlQ 
_model_server_result.datetime_utc      '2024-10-15 11:21:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q5l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":801}' 
#
_entry.id    3Q5L 
#
_exptl.entry_id    3Q5L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              642.783 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(4E,6Z,8S,9S,10E,12S,13R,14S,16R)-13-hydroxy-8,14-dimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-19-{[2-(pyrrolidin-1-yl)ethyl]amino}-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-9-yl carbamate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3Q5L 
_cell.length_a            161.341 
_cell.length_b            161.341 
_cell.length_c            48.142 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q5L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 1 2 
C,G 2 1 
D,H 2 3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_545 y,-x-1,z+1/4 0 1 0 -1 0 0 0 0 1 0 -161.341 12.0355 
3 'crystal symmetry operation' 3_554 -y,x,z-1/4 0 -1 0 1 0 0 0 0 1 0 0 -12.0355 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C34 H50 N4 O8' 
_chem_comp.formula_weight    642.783 
_chem_comp.id                KX2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(4E,6Z,8S,9S,10E,12S,13R,14S,16R)-13-hydroxy-8,14-dimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-19-{[2-(pyrrolidin-1-yl)ethyl]amino}-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-9-yl carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 KX2 sing 171 n n 
N1 C1 KX2 sing 172 n n 
C1 O1 KX2 doub 173 n n 
C20 N1 KX2 sing 174 n n 
N1 HN1 KX2 sing 175 n n 
C22 C2 KX2 sing 176 n n 
C3 C2 KX2 doub 177 n n 
C24 N2 KX2 sing 178 e n 
N2 HN2 KX2 sing 179 n n 
N2 HN2A KX2 sing 180 n n 
C6 O2 KX2 sing 181 n n 
O2 C23 KX2 sing 182 n n 
C4 C3 KX2 sing 183 z n 
C3 H3 KX2 sing 184 n n 
C7 O3 KX2 sing 185 n n 
C24 O3 KX2 sing 186 n n 
C5 C4 KX2 doub 187 n n 
C4 H4 KX2 sing 188 n n 
O4 C24 KX2 doub 189 n n 
C5 C6 KX2 sing 190 n n 
C5 H5 KX2 sing 191 n n 
O5 C11 KX2 sing 192 n n 
O5 HO5 KX2 sing 193 n n 
C7 C6 KX2 sing 194 n n 
C6 H6 KX2 sing 195 n n 
C27 O6 KX2 sing 196 e n 
O6 C12 KX2 sing 197 n n 
C8 C7 KX2 sing 198 n n 
C7 H7 KX2 sing 199 n n 
C9 C8 KX2 doub 200 n n 
C8 C25 KX2 sing 201 n n 
C18 O8 KX2 doub 202 n n 
C10 C9 KX2 sing 203 n n 
C9 H9 KX2 sing 204 n n 
O9 C21 KX2 doub 205 n n 
C11 C10 KX2 sing 206 n n 
C26 C10 KX2 sing 207 n n 
C10 H10 KX2 sing 208 n n 
C11 C12 KX2 sing 209 n n 
C11 H11 KX2 sing 210 n n 
C13 C12 KX2 sing 211 n n 
C12 H12 KX2 sing 212 n n 
C13 C14 KX2 sing 213 n n 
C13 H13 KX2 sing 214 n n 
C13 H13A KX2 sing 215 n n 
C14 C15 KX2 sing 216 n n 
C14 C28 KX2 sing 217 n n 
C14 H14 KX2 sing 218 n n 
C15 C16 KX2 sing 219 n n 
C15 H15 KX2 sing 220 n n 
C15 H15A KX2 sing 221 n n 
C16 C17 KX2 doub 222 n n 
C16 C21 KX2 sing 223 n n 
N29 C17 KX2 sing 224 n n 
C17 C18 KX2 sing 225 n n 
C18 C19 KX2 sing 226 n n 
C20 C19 KX2 doub 227 n n 
C19 H19 KX2 sing 228 n n 
C21 C20 KX2 sing 229 n n 
C22 H22 KX2 sing 230 n n 
C22 H22A KX2 sing 231 n n 
C22 H22B KX2 sing 232 n n 
C23 H23 KX2 sing 233 n n 
C23 H23A KX2 sing 234 n n 
C23 H23B KX2 sing 235 n n 
C25 H25 KX2 sing 236 n n 
C25 H25A KX2 sing 237 n n 
C25 H25B KX2 sing 238 n n 
C26 H26 KX2 sing 239 n n 
C26 H26A KX2 sing 240 n n 
C26 H26B KX2 sing 241 n n 
C27 H27 KX2 sing 242 n n 
C27 H27A KX2 sing 243 n n 
C27 H27B KX2 sing 244 n n 
C28 H28 KX2 sing 245 n n 
C28 H28A KX2 sing 246 n n 
C28 H28B KX2 sing 247 n n 
N29 C30 KX2 sing 248 n n 
N29 HN29 KX2 sing 249 n n 
C30 C31 KX2 sing 250 n n 
C30 H30 KX2 sing 251 n n 
C30 H30A KX2 sing 252 n n 
N32 C31 KX2 sing 253 n n 
C31 H31 KX2 sing 254 n n 
C31 H31A KX2 sing 255 n n 
C33 N32 KX2 sing 256 n n 
N32 C36 KX2 sing 257 n n 
C34 C33 KX2 sing 258 n n 
C33 H33 KX2 sing 259 n n 
C33 H33A KX2 sing 260 n n 
C34 C35 KX2 sing 261 n n 
C34 H34 KX2 sing 262 n n 
C34 H34A KX2 sing 263 n n 
C35 C36 KX2 sing 264 n n 
C35 H35 KX2 sing 265 n n 
C35 H35A KX2 sing 266 n n 
C36 H36 KX2 sing 267 n n 
C36 H36A KX2 sing 268 n n 
#
_atom_sites.entry_id                     3Q5L 
_atom_sites.fract_transf_matrix[1][1]    0.006198 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006198 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020772 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 KX2 A 1 801 801 KX2 KX2 . 
F 2 KX2 B 1 801 801 KX2 KX2 . 
G 2 KX2 C 1 801 801 KX2 KX2 . 
H 2 KX2 D 1 801 801 KX2 KX2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 KX2 . . . H 2 -34.704 -22.551 4.268 1 40.71 ? C1 KX2 801 D 1 
HETATM 2 N N1 KX2 . . . H 2 -34.097 -23.653 3.839 1 39.29 ? N1 KX2 801 D 1 
HETATM 3 O O1 KX2 . . . H 2 -35.367 -22.562 5.281 1 41.77 ? O1 KX2 801 D 1 
HETATM 4 C C2 KX2 . . . H 2 -34.544 -21.308 3.503 1 41.47 ? C2 KX2 801 D 1 
HETATM 5 N N2 KX2 . . . H 2 -26.356 -18.482 4.612 1 39.6 ? N2 KX2 801 D 1 
HETATM 6 O O2 KX2 . . . H 2 -30.781 -18.383 4.788 1 54.38 ? O2 KX2 801 D 1 
HETATM 7 C C3 KX2 . . . H 2 -33.318 -20.739 3.451 1 42.09 ? C3 KX2 801 D 1 
HETATM 8 O O3 KX2 . . . H 2 -28.501 -19.075 3.891 1 40.26 ? O3 KX2 801 D 1 
HETATM 9 C C4 KX2 . . . H 2 -33.09 -19.493 2.74 1 44.06 ? C4 KX2 801 D 1 
HETATM 10 O O4 KX2 . . . H 2 -27.003 -18.076 2.482 1 37.04 ? O4 KX2 801 D 1 
HETATM 11 C C5 KX2 . . . H 2 -31.961 -18.797 2.788 1 44.9 ? C5 KX2 801 D 1 
HETATM 12 O O5 KX2 . . . H 2 -29.32 -20.317 -3.06 1 40.85 ? O5 KX2 801 D 1 
HETATM 13 C C6 KX2 . . . H 2 -30.766 -19.211 3.578 1 46.53 ? C6 KX2 801 D 1 
HETATM 14 O O6 KX2 . . . H 2 -32.006 -19.316 -2.98 1 41.97 ? O6 KX2 801 D 1 
HETATM 15 C C7 KX2 . . . H 2 -29.478 -18.878 2.884 1 43.97 ? C7 KX2 801 D 1 
HETATM 16 C C8 KX2 . . . H 2 -29.145 -19.709 1.677 1 42.31 ? C8 KX2 801 D 1 
HETATM 17 O O8 KX2 . . . H 2 -29.929 -24.746 2.032 1 41.33 ? O8 KX2 801 D 1 
HETATM 18 C C9 KX2 . . . H 2 -29.306 -19.166 0.456 1 41.85 ? C9 KX2 801 D 1 
HETATM 19 O O9 KX2 . . . H 2 -34.987 -23.063 1.142 1 45.49 ? O9 KX2 801 D 1 
HETATM 20 C C10 KX2 . . . H 2 -28.948 -19.912 -0.802 1 41.96 ? C10 KX2 801 D 1 
HETATM 21 C C11 KX2 . . . H 2 -29.833 -19.549 -1.988 1 40.73 ? C11 KX2 801 D 1 
HETATM 22 C C12 KX2 . . . H 2 -31.328 -19.845 -1.834 1 40.67 ? C12 KX2 801 D 1 
HETATM 23 C C13 KX2 . . . H 2 -31.638 -21.356 -1.686 1 40.17 ? C13 KX2 801 D 1 
HETATM 24 C C14 KX2 . . . H 2 -33.139 -21.755 -1.604 1 39.9 ? C14 KX2 801 D 1 
HETATM 25 C C15 KX2 . . . H 2 -33.397 -23.265 -1.3 1 40.31 ? C15 KX2 801 D 1 
HETATM 26 C C16 KX2 . . . H 2 -32.931 -23.6 0.121 1 41.48 ? C16 KX2 801 D 1 
HETATM 27 C C17 KX2 . . . H 2 -31.552 -24.023 0.381 1 40.6 ? C17 KX2 801 D 1 
HETATM 28 C C18 KX2 . . . H 2 -31.11 -24.347 1.787 1 41.04 ? C18 KX2 801 D 1 
HETATM 29 C C19 KX2 . . . H 2 -31.988 -24.182 2.855 1 39.37 ? C19 KX2 801 D 1 
HETATM 30 C C20 KX2 . . . H 2 -33.296 -23.762 2.683 1 40.68 ? C20 KX2 801 D 1 
HETATM 31 C C21 KX2 . . . H 2 -33.82 -23.458 1.309 1 42.31 ? C21 KX2 801 D 1 
HETATM 32 C C22 KX2 . . . H 2 -35.724 -20.735 2.802 1 39.2 ? C22 KX2 801 D 1 
HETATM 33 C C23 KX2 . . . H 2 -30.469 -19.082 6.04 1 56.01 ? C23 KX2 801 D 1 
HETATM 34 C C24 KX2 . . . H 2 -27.228 -18.495 3.61 1 39.36 ? C24 KX2 801 D 1 
HETATM 35 C C25 KX2 . . . H 2 -28.592 -21.09 1.87 1 41.16 ? C25 KX2 801 D 1 
HETATM 36 C C26 KX2 . . . H 2 -27.496 -19.557 -1.137 1 41.53 ? C26 KX2 801 D 1 
HETATM 37 C C27 KX2 . . . H 2 -32.119 -17.894 -2.999 1 40.56 ? C27 KX2 801 D 1 
HETATM 38 C C28 KX2 . . . H 2 -33.87 -20.888 -0.585 1 39.97 ? C28 KX2 801 D 1 
HETATM 39 N N29 KX2 . . . H 2 -30.828 -24.331 -0.667 1 40.8 ? N29 KX2 801 D 1 
HETATM 40 C C30 KX2 . . . H 2 -30.228 -25.654 -0.595 1 43.29 ? C30 KX2 801 D 1 
HETATM 41 C C31 KX2 . . . H 2 -30.757 -26.537 -1.727 1 44.95 ? C31 KX2 801 D 1 
HETATM 42 N N32 KX2 . . . H 2 -30.568 -27.957 -1.414 1 45.05 ? N32 KX2 801 D 1 
HETATM 43 C C33 KX2 . . . H 2 -30.138 -28.875 -2.454 1 45.6 ? C33 KX2 801 D 1 
HETATM 44 C C34 KX2 . . . H 2 -30.435 -30.239 -1.853 1 44.81 ? C34 KX2 801 D 1 
HETATM 45 C C35 KX2 . . . H 2 -30.735 -30.034 -0.379 1 44.74 ? C35 KX2 801 D 1 
HETATM 46 C C36 KX2 . . . H 2 -30.806 -28.537 -0.101 1 44.37 ? C36 KX2 801 D 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           46 
#