data_3Q60 # _model_server_result.job_id EKRep8uKfuJEZ_VrbxYPTA _model_server_result.datetime_utc '2024-11-05 00:38:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 3Q60 # _exptl.entry_id 3Q60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3Q60 _cell.length_a 123.358 _cell.length_b 69.329 _cell.length_c 43.385 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 288 A CYS 458 1_555 A SG CYS 322 A CYS 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc1 B O2A ATP . A ATP 600 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc2 B O1A ATP . A ATP 600 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc3 B O3G ATP . A ATP 600 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc4 D MG MG . A MG 602 1_555 F O HOH . A HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc5 D MG MG . A MG 602 1_555 F O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc6 A OD2 ASP 223 A ASP 393 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc7 A OD1 ASP 237 A ASP 407 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc8 B O2B ATP . A ATP 600 1_555 E MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc9 D MG MG . A MG 602 1_555 F O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc10 E MG MG . A MG 603 1_555 F O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc11 D MG MG . A MG 602 1_555 F O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc12 E MG MG . A MG 603 1_555 F O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3Q60 _atom_sites.fract_transf_matrix[1][1] 0.008106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014424 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023049 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 600 600 ATP ATP . C 3 MLI A 1 601 601 MLI MLI . D 4 MG A 1 602 602 MG MG . E 4 MG A 1 603 603 MG MG . F 5 HOH A 1 604 604 HOH HOH . F 5 HOH A 2 605 605 HOH HOH . F 5 HOH A 3 606 606 HOH HOH . F 5 HOH A 4 607 607 HOH HOH . F 5 HOH A 5 608 608 HOH HOH . F 5 HOH A 6 609 609 HOH HOH . F 5 HOH A 7 610 610 HOH HOH . F 5 HOH A 8 611 611 HOH HOH . F 5 HOH A 9 612 612 HOH HOH . F 5 HOH A 10 613 613 HOH HOH . F 5 HOH A 11 614 614 HOH HOH . F 5 HOH A 12 615 615 HOH HOH . F 5 HOH A 13 616 616 HOH HOH . F 5 HOH A 14 617 617 HOH HOH . F 5 HOH A 15 618 618 HOH HOH . F 5 HOH A 16 619 619 HOH HOH . F 5 HOH A 17 620 620 HOH HOH . F 5 HOH A 18 621 621 HOH HOH . F 5 HOH A 19 622 622 HOH HOH . F 5 HOH A 20 623 623 HOH HOH . F 5 HOH A 21 624 624 HOH HOH . F 5 HOH A 22 625 625 HOH HOH . F 5 HOH A 23 626 626 HOH HOH . F 5 HOH A 24 627 627 HOH HOH . F 5 HOH A 25 628 628 HOH HOH . F 5 HOH A 26 629 629 HOH HOH . F 5 HOH A 27 630 630 HOH HOH . F 5 HOH A 28 631 631 HOH HOH . F 5 HOH A 29 632 632 HOH HOH . F 5 HOH A 30 633 633 HOH HOH . F 5 HOH A 31 634 634 HOH HOH . F 5 HOH A 32 635 635 HOH HOH . F 5 HOH A 33 636 636 HOH HOH . F 5 HOH A 34 637 637 HOH HOH . F 5 HOH A 35 638 638 HOH HOH . F 5 HOH A 36 639 639 HOH HOH . F 5 HOH A 37 640 640 HOH HOH . F 5 HOH A 38 641 641 HOH HOH . F 5 HOH A 39 642 642 HOH HOH . F 5 HOH A 40 643 643 HOH HOH . F 5 HOH A 41 644 644 HOH HOH . F 5 HOH A 42 645 645 HOH HOH . F 5 HOH A 43 646 646 HOH HOH . F 5 HOH A 44 647 647 HOH HOH . F 5 HOH A 45 648 648 HOH HOH . F 5 HOH A 46 649 649 HOH HOH . F 5 HOH A 47 650 650 HOH HOH . F 5 HOH A 48 651 651 HOH HOH . F 5 HOH A 49 652 652 HOH HOH . F 5 HOH A 50 653 653 HOH HOH . F 5 HOH A 51 654 654 HOH HOH . F 5 HOH A 52 655 655 HOH HOH . F 5 HOH A 53 656 656 HOH HOH . F 5 HOH A 54 657 657 HOH HOH . F 5 HOH A 55 658 658 HOH HOH . F 5 HOH A 56 659 659 HOH HOH . F 5 HOH A 57 660 660 HOH HOH . F 5 HOH A 58 661 661 HOH HOH . F 5 HOH A 59 662 662 HOH HOH . F 5 HOH A 60 663 663 HOH HOH . F 5 HOH A 61 664 664 HOH HOH . F 5 HOH A 62 665 665 HOH HOH . F 5 HOH A 63 666 666 HOH HOH . F 5 HOH A 64 667 667 HOH HOH . F 5 HOH A 65 668 668 HOH HOH . F 5 HOH A 66 669 669 HOH HOH . F 5 HOH A 67 670 670 HOH HOH . F 5 HOH A 68 671 671 HOH HOH . F 5 HOH A 69 672 672 HOH HOH . F 5 HOH A 70 673 673 HOH HOH . F 5 HOH A 71 674 674 HOH HOH . F 5 HOH A 72 675 675 HOH HOH . F 5 HOH A 73 676 676 HOH HOH . F 5 HOH A 74 677 677 HOH HOH . F 5 HOH A 75 678 678 HOH HOH . F 5 HOH A 76 679 679 HOH HOH . F 5 HOH A 77 680 680 HOH HOH . F 5 HOH A 78 681 681 HOH HOH . F 5 HOH A 79 682 682 HOH HOH . F 5 HOH A 80 683 683 HOH HOH . F 5 HOH A 81 684 684 HOH HOH . F 5 HOH A 82 685 685 HOH HOH . F 5 HOH A 83 686 686 HOH HOH . F 5 HOH A 84 687 687 HOH HOH . F 5 HOH A 85 688 688 HOH HOH . F 5 HOH A 86 689 689 HOH HOH . F 5 HOH A 87 690 690 HOH HOH . F 5 HOH A 88 691 691 HOH HOH . F 5 HOH A 89 692 692 HOH HOH . F 5 HOH A 90 693 693 HOH HOH . F 5 HOH A 91 694 694 HOH HOH . F 5 HOH A 92 695 695 HOH HOH . F 5 HOH A 93 696 696 HOH HOH . F 5 HOH A 94 697 697 HOH HOH . F 5 HOH A 95 698 698 HOH HOH . F 5 HOH A 96 699 699 HOH HOH . F 5 HOH A 97 700 700 HOH HOH . F 5 HOH A 98 701 701 HOH HOH . F 5 HOH A 99 702 702 HOH HOH . F 5 HOH A 100 703 703 HOH HOH . F 5 HOH A 101 704 704 HOH HOH . F 5 HOH A 102 705 705 HOH HOH . F 5 HOH A 103 706 706 HOH HOH . F 5 HOH A 104 707 707 HOH HOH . F 5 HOH A 105 708 708 HOH HOH . F 5 HOH A 106 709 709 HOH HOH . F 5 HOH A 107 710 710 HOH HOH . F 5 HOH A 108 711 711 HOH HOH . F 5 HOH A 109 712 712 HOH HOH . F 5 HOH A 110 713 713 HOH HOH . F 5 HOH A 111 714 714 HOH HOH . F 5 HOH A 112 715 715 HOH HOH . F 5 HOH A 113 716 716 HOH HOH . F 5 HOH A 114 717 717 HOH HOH . F 5 HOH A 115 718 718 HOH HOH . F 5 HOH A 116 719 719 HOH HOH . F 5 HOH A 117 720 720 HOH HOH . F 5 HOH A 118 721 721 HOH HOH . F 5 HOH A 119 722 722 HOH HOH . F 5 HOH A 120 723 723 HOH HOH . F 5 HOH A 121 724 724 HOH HOH . F 5 HOH A 122 725 725 HOH HOH . F 5 HOH A 123 726 726 HOH HOH . F 5 HOH A 124 727 727 HOH HOH . F 5 HOH A 125 728 728 HOH HOH . F 5 HOH A 126 729 729 HOH HOH . F 5 HOH A 127 730 730 HOH HOH . F 5 HOH A 128 731 731 HOH HOH . F 5 HOH A 129 732 732 HOH HOH . F 5 HOH A 130 733 733 HOH HOH . F 5 HOH A 131 734 734 HOH HOH . F 5 HOH A 132 735 735 HOH HOH . F 5 HOH A 133 736 736 HOH HOH . F 5 HOH A 134 737 737 HOH HOH . F 5 HOH A 135 738 738 HOH HOH . F 5 HOH A 136 739 739 HOH HOH . F 5 HOH A 137 740 740 HOH HOH . F 5 HOH A 138 741 741 HOH HOH . F 5 HOH A 139 742 742 HOH HOH . F 5 HOH A 140 743 743 HOH HOH . F 5 HOH A 141 744 744 HOH HOH . F 5 HOH A 142 745 745 HOH HOH . F 5 HOH A 143 746 746 HOH HOH . F 5 HOH A 144 747 747 HOH HOH . F 5 HOH A 145 748 748 HOH HOH . F 5 HOH A 146 749 749 HOH HOH . F 5 HOH A 147 750 750 HOH HOH . F 5 HOH A 148 751 751 HOH HOH . F 5 HOH A 149 752 752 HOH HOH . F 5 HOH A 150 753 753 HOH HOH . F 5 HOH A 151 754 754 HOH HOH . F 5 HOH A 152 755 755 HOH HOH . F 5 HOH A 153 756 756 HOH HOH . F 5 HOH A 154 757 757 HOH HOH . F 5 HOH A 155 758 758 HOH HOH . F 5 HOH A 156 759 759 HOH HOH . F 5 HOH A 157 760 760 HOH HOH . F 5 HOH A 158 761 761 HOH HOH . F 5 HOH A 159 762 762 HOH HOH . F 5 HOH A 160 763 763 HOH HOH . F 5 HOH A 161 764 764 HOH HOH . F 5 HOH A 162 765 765 HOH HOH . F 5 HOH A 163 766 766 HOH HOH . F 5 HOH A 164 767 767 HOH HOH . F 5 HOH A 165 768 768 HOH HOH . F 5 HOH A 166 769 769 HOH HOH . F 5 HOH A 167 770 770 HOH HOH . F 5 HOH A 168 771 771 HOH HOH . F 5 HOH A 169 772 772 HOH HOH . F 5 HOH A 170 773 773 HOH HOH . F 5 HOH A 171 774 774 HOH HOH . F 5 HOH A 172 775 775 HOH HOH . F 5 HOH A 173 776 776 HOH HOH . F 5 HOH A 174 777 777 HOH HOH . F 5 HOH A 175 778 778 HOH HOH . F 5 HOH A 176 779 779 HOH HOH . F 5 HOH A 177 780 780 HOH HOH . F 5 HOH A 178 781 781 HOH HOH . F 5 HOH A 179 782 782 HOH HOH . F 5 HOH A 180 783 783 HOH HOH . F 5 HOH A 181 784 784 HOH HOH . F 5 HOH A 182 785 785 HOH HOH . F 5 HOH A 183 786 786 HOH HOH . F 5 HOH A 184 787 787 HOH HOH . F 5 HOH A 185 788 788 HOH HOH . F 5 HOH A 186 789 789 HOH HOH . F 5 HOH A 187 790 790 HOH HOH . F 5 HOH A 188 791 791 HOH HOH . F 5 HOH A 189 792 792 HOH HOH . F 5 HOH A 190 793 793 HOH HOH . F 5 HOH A 191 794 794 HOH HOH . F 5 HOH A 192 795 795 HOH HOH . F 5 HOH A 193 796 796 HOH HOH . F 5 HOH A 194 797 797 HOH HOH . F 5 HOH A 195 798 798 HOH HOH . F 5 HOH A 196 799 799 HOH HOH . F 5 HOH A 197 800 800 HOH HOH . F 5 HOH A 198 801 801 HOH HOH . F 5 HOH A 199 802 802 HOH HOH . F 5 HOH A 200 803 803 HOH HOH . F 5 HOH A 201 804 804 HOH HOH . F 5 HOH A 202 805 805 HOH HOH . F 5 HOH A 203 806 806 HOH HOH . F 5 HOH A 204 807 807 HOH HOH . F 5 HOH A 205 808 808 HOH HOH . F 5 HOH A 206 809 809 HOH HOH . F 5 HOH A 207 810 810 HOH HOH . F 5 HOH A 208 811 811 HOH HOH . F 5 HOH A 209 812 812 HOH HOH . F 5 HOH A 210 813 813 HOH HOH . F 5 HOH A 211 814 814 HOH HOH . F 5 HOH A 212 815 815 HOH HOH . F 5 HOH A 213 816 816 HOH HOH . F 5 HOH A 214 817 817 HOH HOH . F 5 HOH A 215 818 818 HOH HOH . F 5 HOH A 216 819 819 HOH HOH . F 5 HOH A 217 820 820 HOH HOH . F 5 HOH A 218 821 821 HOH HOH . F 5 HOH A 219 822 822 HOH HOH . F 5 HOH A 220 823 823 HOH HOH . F 5 HOH A 221 824 824 HOH HOH . F 5 HOH A 222 825 825 HOH HOH . F 5 HOH A 223 826 826 HOH HOH . F 5 HOH A 224 827 827 HOH HOH . F 5 HOH A 225 828 828 HOH HOH . F 5 HOH A 226 829 829 HOH HOH . F 5 HOH A 227 830 830 HOH HOH . F 5 HOH A 228 831 831 HOH HOH . F 5 HOH A 229 832 832 HOH HOH . F 5 HOH A 230 833 833 HOH HOH . F 5 HOH A 231 834 834 HOH HOH . F 5 HOH A 232 835 835 HOH HOH . F 5 HOH A 233 836 836 HOH HOH . F 5 HOH A 234 837 837 HOH HOH . F 5 HOH A 235 838 838 HOH HOH . F 5 HOH A 236 839 839 HOH HOH . F 5 HOH A 237 840 840 HOH HOH . F 5 HOH A 238 841 841 HOH HOH . F 5 HOH A 239 842 842 HOH HOH . F 5 HOH A 240 843 843 HOH HOH . F 5 HOH A 241 844 844 HOH HOH . F 5 HOH A 242 845 845 HOH HOH . F 5 HOH A 243 846 846 HOH HOH . F 5 HOH A 244 847 847 HOH HOH . F 5 HOH A 245 848 848 HOH HOH . F 5 HOH A 246 849 849 HOH HOH . F 5 HOH A 247 850 850 HOH HOH . F 5 HOH A 248 851 851 HOH HOH . F 5 HOH A 249 852 852 HOH HOH . F 5 HOH A 250 853 853 HOH HOH . F 5 HOH A 251 854 854 HOH HOH . F 5 HOH A 252 855 855 HOH HOH . F 5 HOH A 253 856 856 HOH HOH . F 5 HOH A 254 857 857 HOH HOH . F 5 HOH A 255 858 858 HOH HOH . F 5 HOH A 256 859 859 HOH HOH . F 5 HOH A 257 860 860 HOH HOH . F 5 HOH A 258 861 861 HOH HOH . F 5 HOH A 259 862 862 HOH HOH . F 5 HOH A 260 863 863 HOH HOH . F 5 HOH A 261 864 864 HOH HOH . F 5 HOH A 262 865 865 HOH HOH . F 5 HOH A 263 866 866 HOH HOH . F 5 HOH A 264 867 867 HOH HOH . F 5 HOH A 265 868 868 HOH HOH . F 5 HOH A 266 869 869 HOH HOH . F 5 HOH A 267 870 870 HOH HOH . F 5 HOH A 268 871 871 HOH HOH . F 5 HOH A 269 872 872 HOH HOH . F 5 HOH A 270 873 873 HOH HOH . F 5 HOH A 271 874 874 HOH HOH . F 5 HOH A 272 875 875 HOH HOH . F 5 HOH A 273 876 876 HOH HOH . F 5 HOH A 274 877 877 HOH HOH . F 5 HOH A 275 878 878 HOH HOH . F 5 HOH A 276 879 879 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -13.355 _atom_site.Cartn_y 11.162 _atom_site.Cartn_z -21.246 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #