data_3Q6F # _model_server_result.job_id tczOp0PVQCs2WHAHvsLrxg _model_server_result.datetime_utc '2024-11-27 21:38:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":212}' # _entry.id 3Q6F # _exptl.entry_id 3Q6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3Q6F _cell.length_a 178.504 _cell.length_b 178.504 _cell.length_c 218.9 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 PISA dimeric 2 author_and_software_defined_assembly 5 PISA dimeric 2 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M 1 1 C,D,N 2 1 E,F,O 3 1 G,H,P 4 1 I,J,Q 5 1 K,L,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 23 1_555 A SG CYS 87 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 136 A CYS 134 1_555 A SG CYS 195 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 A SG CYS 213 A CYS 211 1_555 B SG CYS 233 B CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf5 B SG CYS 157 B CYS 140 1_555 B SG CYS 213 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 C SG CYS 22 C CYS 23 1_555 C SG CYS 87 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 C SG CYS 136 C CYS 134 1_555 C SG CYS 195 C CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf8 C SG CYS 213 C CYS 211 1_555 D SG CYS 233 D CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf9 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf10 D SG CYS 157 D CYS 140 1_555 D SG CYS 213 D CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf11 E SG CYS 22 E CYS 23 1_555 E SG CYS 87 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 E SG CYS 136 E CYS 134 1_555 E SG CYS 195 E CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf13 E SG CYS 213 E CYS 211 1_555 F SG CYS 233 F CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf14 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf15 F SG CYS 157 F CYS 140 1_555 F SG CYS 213 F CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf16 G SG CYS 22 G CYS 23 1_555 G SG CYS 87 G CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf17 G SG CYS 136 G CYS 134 1_555 G SG CYS 195 G CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf18 G SG CYS 213 G CYS 211 1_555 H SG CYS 233 H CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf19 H SG CYS 22 H CYS 22 1_555 H SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf20 H SG CYS 157 H CYS 140 1_555 H SG CYS 213 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf21 I SG CYS 22 I CYS 23 1_555 I SG CYS 87 I CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf22 I SG CYS 136 I CYS 134 1_555 I SG CYS 195 I CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf23 I SG CYS 213 I CYS 211 1_555 J SG CYS 233 J CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf24 J SG CYS 22 J CYS 22 1_555 J SG CYS 96 J CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf25 J SG CYS 157 J CYS 140 1_555 J SG CYS 213 J CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf26 K SG CYS 22 K CYS 23 1_555 K SG CYS 87 K CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf27 K SG CYS 136 K CYS 134 1_555 K SG CYS 195 K CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf28 K SG CYS 213 K CYS 211 1_555 L SG CYS 233 L CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf29 L SG CYS 22 L CYS 22 1_555 L SG CYS 96 L CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf30 L SG CYS 157 L CYS 140 1_555 L SG CYS 213 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale1 B C TYS 105 B TYS 100 1_555 B N ASP 106 B ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C TYS 107 B TYS 100 1_555 B N ASN 108 B ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 D C TYS 105 D TYS 100 1_555 D N ASP 106 D ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 D C TYS 107 D TYS 100 1_555 D N ASN 108 D ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 F C TYS 105 F TYS 100 1_555 F N ASP 106 F ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 F C TYS 107 F TYS 100 1_555 F N ASN 108 F ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.337 ? covale ? covale7 H C TYS 105 H TYS 100 1_555 H N ASP 106 H ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 H C TYS 107 H TYS 100 1_555 H N ASN 108 H ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.33 ? covale ? covale9 J C TYS 105 J TYS 100 1_555 J N ASP 106 J ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 J C TYS 107 J TYS 100 1_555 J N ASN 108 J ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 L C TYS 105 L TYS 100 1_555 L N ASP 106 L ASP 100 1_555 A ? ? B ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 L C TYS 107 L TYS 100 1_555 L N ASN 108 L ASN 100 1_555 C ? ? D ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 235 n n C1 C2 PEG sing 236 n n C1 H11 PEG sing 237 n n C1 H12 PEG sing 238 n n O1 HO1 PEG sing 239 n n C2 O2 PEG sing 240 n n C2 H21 PEG sing 241 n n C2 H22 PEG sing 242 n n O2 C3 PEG sing 243 n n C3 C4 PEG sing 244 n n C3 H31 PEG sing 245 n n C3 H32 PEG sing 246 n n C4 O4 PEG sing 247 n n C4 H41 PEG sing 248 n n C4 H42 PEG sing 249 n n O4 HO4 PEG sing 250 n n # _atom_sites.entry_id 3Q6F _atom_sites.fract_transf_matrix[1][1] 0.005602 _atom_sites.fract_transf_matrix[1][2] 0.003234 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006469 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 PEG A 1 212 1 PEG PEG . N 3 PEG C 1 212 1 PEG PEG . O 3 PEG E 1 212 1 PEG PEG . P 3 PEG G 1 212 1 PEG PEG . Q 3 PEG I 1 212 1 PEG PEG . R 3 PEG K 1 212 1 PEG PEG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . O 3 -51.16 -11.099 -53.058 1 91.25 ? C1 PEG 212 E 1 HETATM 2 O O1 PEG . . . O 3 -50.398 -10.331 -52.104 1 84.82 ? O1 PEG 212 E 1 HETATM 3 C C2 PEG . . . O 3 -50.445 -11.143 -54.415 1 94.91 ? C2 PEG 212 E 1 HETATM 4 O O2 PEG . . . O 3 -50.803 -12.278 -55.217 1 93.68 ? O2 PEG 212 E 1 HETATM 5 C C3 PEG . . . O 3 -50.676 -11.977 -56.608 1 90.56 ? C3 PEG 212 E 1 HETATM 6 C C4 PEG . . . O 3 -50.999 -13.184 -57.488 1 95.93 ? C4 PEG 212 E 1 HETATM 7 O O4 PEG . . . O 3 -52.344 -13.658 -57.297 1 96.98 ? O4 PEG 212 E 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #