data_3Q6I # _model_server_result.job_id r7nXY-Gn3gAMaQMYll9jVw _model_server_result.datetime_utc '2024-11-29 15:21:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q6i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":455}' # _entry.id 3Q6I # _exptl.entry_id 3Q6I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 424.569 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R,8R,11S,14S,17S,21R)-5,8,11,14,17-PENTAMETHYL-4,7,10,13,16,19-HEXAOXADOCOSANE-2,21-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 105.02 _cell.angle_beta 97.06 _cell.angle_gamma 93.66 _cell.entry_id 3Q6I _cell.length_a 63.069 _cell.length_b 71.027 _cell.length_c 92.917 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q6I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,J,K 1 1 C,D,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H44 O8' _chem_comp.formula_weight 424.569 _chem_comp.id ZPG _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R,8R,11S,14S,17S,21R)-5,8,11,14,17-PENTAMETHYL-4,7,10,13,16,19-HEXAOXADOCOSANE-2,21-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O29 C27 ZPG sing 451 n n O29 HO29 ZPG sing 452 n n C27 C28 ZPG sing 453 n n C27 C24 ZPG sing 454 n n C27 H27 ZPG sing 455 n n C28 H281 ZPG sing 456 n n C28 H282 ZPG sing 457 n n C28 H283 ZPG sing 458 n n C24 O23 ZPG sing 459 n n C24 H241 ZPG sing 460 n n C24 H242 ZPG sing 461 n n O23 C22 ZPG sing 462 n n C22 C26 ZPG sing 463 n n C22 C21 ZPG sing 464 n n C22 H22 ZPG sing 465 n n C26 H261 ZPG sing 466 n n C26 H262 ZPG sing 467 n n C26 H263 ZPG sing 468 n n C21 O20 ZPG sing 469 n n C21 H211 ZPG sing 470 n n C21 H212 ZPG sing 471 n n O20 C20 ZPG sing 472 n n C20 C25 ZPG sing 473 n n C20 C18 ZPG sing 474 n n C20 H20 ZPG sing 475 n n C25 H251 ZPG sing 476 n n C25 H252 ZPG sing 477 n n C25 H253 ZPG sing 478 n n C18 O17 ZPG sing 479 n n C18 H181 ZPG sing 480 n n C18 H182 ZPG sing 481 n n O17 C15 ZPG sing 482 n n C15 C16 ZPG sing 483 n n C15 C14 ZPG sing 484 n n C15 H15 ZPG sing 485 n n C16 H161 ZPG sing 486 n n C16 H162 ZPG sing 487 n n C16 H163 ZPG sing 488 n n C14 O13 ZPG sing 489 n n C14 H141 ZPG sing 490 n n C14 H142 ZPG sing 491 n n O13 C11 ZPG sing 492 n n C11 C12 ZPG sing 493 n n C11 C10 ZPG sing 494 n n C11 H11 ZPG sing 495 n n C12 H121 ZPG sing 496 n n C12 H122 ZPG sing 497 n n C12 H123 ZPG sing 498 n n C10 O9 ZPG sing 499 n n C10 H101 ZPG sing 500 n n C10 H102 ZPG sing 501 n n O9 C7 ZPG sing 502 n n C7 C8 ZPG sing 503 n n C7 C6 ZPG sing 504 n n C7 H7 ZPG sing 505 n n C8 H81 ZPG sing 506 n n C8 H82 ZPG sing 507 n n C8 H83 ZPG sing 508 n n C6 O5 ZPG sing 509 n n C6 H61 ZPG sing 510 n n C6 H62 ZPG sing 511 n n O5 C4 ZPG sing 512 n n C4 C2 ZPG sing 513 n n C4 H41 ZPG sing 514 n n C4 H42 ZPG sing 515 n n C2 C3 ZPG sing 516 n n C2 O1 ZPG sing 517 n n C2 H2 ZPG sing 518 n n C3 H31 ZPG sing 519 n n C3 H32 ZPG sing 520 n n C3 H33 ZPG sing 521 n n O1 HO1 ZPG sing 522 n n # _atom_sites.entry_id 3Q6I _atom_sites.fract_transf_matrix[1][1] 0.015856 _atom_sites.fract_transf_matrix[1][2] 0.001013 _atom_sites.fract_transf_matrix[1][3] 0.002324 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014108 _atom_sites.fract_transf_matrix[2][3] 0.003949 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 1 1 NAD NAD . F 3 ZPG A 1 455 1 ZPG DRG . G 2 NAD B 1 3 3 NAD NAD . H 2 NAD C 1 2 2 NAD NAD . I 2 NAD D 1 4 4 NAD NAD . J 4 HOH A 1 2 2 HOH HOH . J 4 HOH A 2 4 4 HOH HOH . J 4 HOH A 3 5 5 HOH HOH . J 4 HOH A 4 6 6 HOH HOH . J 4 HOH A 5 456 1 HOH HOH . J 4 HOH A 6 457 9 HOH HOH . J 4 HOH A 7 458 10 HOH HOH . J 4 HOH A 8 459 13 HOH HOH . J 4 HOH A 9 460 14 HOH HOH . J 4 HOH A 10 461 16 HOH HOH . J 4 HOH A 11 462 17 HOH HOH . J 4 HOH A 12 463 25 HOH HOH . J 4 HOH A 13 464 26 HOH HOH . J 4 HOH A 14 465 31 HOH HOH . J 4 HOH A 15 466 32 HOH HOH . J 4 HOH A 16 467 33 HOH HOH . J 4 HOH A 17 468 40 HOH HOH . J 4 HOH A 18 469 43 HOH HOH . J 4 HOH A 19 470 44 HOH HOH . J 4 HOH A 20 471 49 HOH HOH . J 4 HOH A 21 472 51 HOH HOH . J 4 HOH A 22 473 52 HOH HOH . J 4 HOH A 23 474 54 HOH HOH . J 4 HOH A 24 475 55 HOH HOH . J 4 HOH A 25 476 57 HOH HOH . J 4 HOH A 26 477 58 HOH HOH . J 4 HOH A 27 478 62 HOH HOH . J 4 HOH A 28 479 66 HOH HOH . J 4 HOH A 29 480 69 HOH HOH . J 4 HOH A 30 481 72 HOH HOH . J 4 HOH A 31 482 74 HOH HOH . J 4 HOH A 32 483 79 HOH HOH . J 4 HOH A 33 484 82 HOH HOH . J 4 HOH A 34 485 84 HOH HOH . J 4 HOH A 35 486 85 HOH HOH . J 4 HOH A 36 487 88 HOH HOH . J 4 HOH A 37 488 92 HOH HOH . J 4 HOH A 38 489 93 HOH HOH . J 4 HOH A 39 490 99 HOH HOH . J 4 HOH A 40 491 102 HOH HOH . J 4 HOH A 41 492 110 HOH HOH . J 4 HOH A 42 493 112 HOH HOH . J 4 HOH A 43 494 114 HOH HOH . J 4 HOH A 44 495 118 HOH HOH . J 4 HOH A 45 496 121 HOH HOH . J 4 HOH A 46 497 124 HOH HOH . J 4 HOH A 47 498 128 HOH HOH . J 4 HOH A 48 499 129 HOH HOH . J 4 HOH A 49 500 131 HOH HOH . J 4 HOH A 50 501 134 HOH HOH . J 4 HOH A 51 502 135 HOH HOH . J 4 HOH A 52 503 136 HOH HOH . J 4 HOH A 53 504 137 HOH HOH . J 4 HOH A 54 505 139 HOH HOH . J 4 HOH A 55 506 155 HOH HOH . J 4 HOH A 56 507 159 HOH HOH . J 4 HOH A 57 508 161 HOH HOH . J 4 HOH A 58 509 162 HOH HOH . J 4 HOH A 59 510 163 HOH HOH . J 4 HOH A 60 511 168 HOH HOH . J 4 HOH A 61 512 170 HOH HOH . J 4 HOH A 62 513 177 HOH HOH . J 4 HOH A 63 514 180 HOH HOH . J 4 HOH A 64 515 182 HOH HOH . J 4 HOH A 65 516 191 HOH HOH . J 4 HOH A 66 517 194 HOH HOH . J 4 HOH A 67 518 200 HOH HOH . J 4 HOH A 68 519 201 HOH HOH . J 4 HOH A 69 520 202 HOH HOH . J 4 HOH A 70 521 214 HOH HOH . J 4 HOH A 71 522 216 HOH HOH . J 4 HOH A 72 523 218 HOH HOH . J 4 HOH A 73 524 224 HOH HOH . J 4 HOH A 74 525 239 HOH HOH . J 4 HOH A 75 526 243 HOH HOH . J 4 HOH A 76 527 245 HOH HOH . J 4 HOH A 77 528 246 HOH HOH . J 4 HOH A 78 529 247 HOH HOH . K 4 HOH B 1 8 8 HOH HOH . K 4 HOH B 2 455 19 HOH HOH . K 4 HOH B 3 456 22 HOH HOH . K 4 HOH B 4 457 27 HOH HOH . K 4 HOH B 5 458 28 HOH HOH . K 4 HOH B 6 459 30 HOH HOH . K 4 HOH B 7 460 34 HOH HOH . K 4 HOH B 8 461 36 HOH HOH . K 4 HOH B 9 462 37 HOH HOH . K 4 HOH B 10 463 38 HOH HOH . K 4 HOH B 11 464 39 HOH HOH . K 4 HOH B 12 465 41 HOH HOH . K 4 HOH B 13 466 42 HOH HOH . K 4 HOH B 14 467 45 HOH HOH . K 4 HOH B 15 468 47 HOH HOH . K 4 HOH B 16 469 48 HOH HOH . K 4 HOH B 17 470 53 HOH HOH . K 4 HOH B 18 471 64 HOH HOH . K 4 HOH B 19 472 65 HOH HOH . K 4 HOH B 20 473 68 HOH HOH . K 4 HOH B 21 474 76 HOH HOH . K 4 HOH B 22 475 77 HOH HOH . K 4 HOH B 23 476 78 HOH HOH . K 4 HOH B 24 477 81 HOH HOH . K 4 HOH B 25 478 83 HOH HOH . K 4 HOH B 26 479 86 HOH HOH . K 4 HOH B 27 480 89 HOH HOH . K 4 HOH B 28 481 91 HOH HOH . K 4 HOH B 29 482 95 HOH HOH . K 4 HOH B 30 483 97 HOH HOH . K 4 HOH B 31 484 98 HOH HOH . K 4 HOH B 32 485 103 HOH HOH . K 4 HOH B 33 486 104 HOH HOH . K 4 HOH B 34 487 105 HOH HOH . K 4 HOH B 35 488 106 HOH HOH . K 4 HOH B 36 489 107 HOH HOH . K 4 HOH B 37 490 111 HOH HOH . K 4 HOH B 38 491 115 HOH HOH . K 4 HOH B 39 492 116 HOH HOH . K 4 HOH B 40 493 120 HOH HOH . K 4 HOH B 41 494 123 HOH HOH . K 4 HOH B 42 495 125 HOH HOH . K 4 HOH B 43 496 126 HOH HOH . K 4 HOH B 44 497 127 HOH HOH . K 4 HOH B 45 498 133 HOH HOH . K 4 HOH B 46 499 140 HOH HOH . K 4 HOH B 47 500 141 HOH HOH . K 4 HOH B 48 501 142 HOH HOH . K 4 HOH B 49 502 147 HOH HOH . K 4 HOH B 50 503 148 HOH HOH . K 4 HOH B 51 504 151 HOH HOH . K 4 HOH B 52 505 154 HOH HOH . K 4 HOH B 53 506 156 HOH HOH . K 4 HOH B 54 507 167 HOH HOH . K 4 HOH B 55 508 173 HOH HOH . K 4 HOH B 56 509 175 HOH HOH . K 4 HOH B 57 510 184 HOH HOH . K 4 HOH B 58 511 189 HOH HOH . K 4 HOH B 59 512 195 HOH HOH . K 4 HOH B 60 513 196 HOH HOH . K 4 HOH B 61 514 205 HOH HOH . K 4 HOH B 62 515 208 HOH HOH . K 4 HOH B 63 516 210 HOH HOH . K 4 HOH B 64 517 222 HOH HOH . K 4 HOH B 65 518 227 HOH HOH . K 4 HOH B 66 519 229 HOH HOH . K 4 HOH B 67 520 232 HOH HOH . K 4 HOH B 68 521 233 HOH HOH . K 4 HOH B 69 522 238 HOH HOH . L 4 HOH C 1 3 3 HOH HOH . L 4 HOH C 2 7 7 HOH HOH . L 4 HOH C 3 455 11 HOH HOH . L 4 HOH C 4 456 12 HOH HOH . L 4 HOH C 5 457 20 HOH HOH . L 4 HOH C 6 458 21 HOH HOH . L 4 HOH C 7 459 35 HOH HOH . L 4 HOH C 8 460 46 HOH HOH . L 4 HOH C 9 461 50 HOH HOH . L 4 HOH C 10 462 59 HOH HOH . L 4 HOH C 11 463 60 HOH HOH . L 4 HOH C 12 464 75 HOH HOH . L 4 HOH C 13 465 80 HOH HOH . L 4 HOH C 14 466 87 HOH HOH . L 4 HOH C 15 467 94 HOH HOH . L 4 HOH C 16 468 109 HOH HOH . L 4 HOH C 17 469 117 HOH HOH . L 4 HOH C 18 470 119 HOH HOH . L 4 HOH C 19 471 130 HOH HOH . L 4 HOH C 20 472 132 HOH HOH . L 4 HOH C 21 473 138 HOH HOH . L 4 HOH C 22 474 145 HOH HOH . L 4 HOH C 23 475 146 HOH HOH . L 4 HOH C 24 476 157 HOH HOH . L 4 HOH C 25 477 166 HOH HOH . L 4 HOH C 26 478 169 HOH HOH . L 4 HOH C 27 479 171 HOH HOH . L 4 HOH C 28 480 172 HOH HOH . L 4 HOH C 29 481 174 HOH HOH . L 4 HOH C 30 482 176 HOH HOH . L 4 HOH C 31 483 179 HOH HOH . L 4 HOH C 32 484 183 HOH HOH . L 4 HOH C 33 485 190 HOH HOH . L 4 HOH C 34 486 192 HOH HOH . L 4 HOH C 35 487 193 HOH HOH . L 4 HOH C 36 488 206 HOH HOH . L 4 HOH C 37 489 221 HOH HOH . L 4 HOH C 38 490 236 HOH HOH . L 4 HOH C 39 491 244 HOH HOH . M 4 HOH D 1 455 15 HOH HOH . M 4 HOH D 2 456 23 HOH HOH . M 4 HOH D 3 457 29 HOH HOH . M 4 HOH D 4 458 61 HOH HOH . M 4 HOH D 5 459 63 HOH HOH . M 4 HOH D 6 460 67 HOH HOH . M 4 HOH D 7 461 70 HOH HOH . M 4 HOH D 8 462 73 HOH HOH . M 4 HOH D 9 463 90 HOH HOH . M 4 HOH D 10 464 96 HOH HOH . M 4 HOH D 11 465 108 HOH HOH . M 4 HOH D 12 466 113 HOH HOH . M 4 HOH D 13 467 122 HOH HOH . M 4 HOH D 14 468 143 HOH HOH . M 4 HOH D 15 469 144 HOH HOH . M 4 HOH D 16 470 150 HOH HOH . M 4 HOH D 17 471 152 HOH HOH . M 4 HOH D 18 472 160 HOH HOH . M 4 HOH D 19 473 164 HOH HOH . M 4 HOH D 20 474 178 HOH HOH . M 4 HOH D 21 475 181 HOH HOH . M 4 HOH D 22 476 185 HOH HOH . M 4 HOH D 23 477 186 HOH HOH . M 4 HOH D 24 478 187 HOH HOH . M 4 HOH D 25 479 198 HOH HOH . M 4 HOH D 26 480 199 HOH HOH . M 4 HOH D 27 481 203 HOH HOH . M 4 HOH D 28 482 209 HOH HOH . M 4 HOH D 29 483 219 HOH HOH . M 4 HOH D 30 484 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O29 ZPG . . . F 3 19.143 -4.998 3.119 1 65.36 ? O29 ZPG 455 A 1 HETATM 2 C C27 ZPG . . . F 3 19.3 -3.854 2.258 1 66.08 ? C27 ZPG 455 A 1 HETATM 3 C C28 ZPG . . . F 3 18.043 -2.972 2.245 1 64.41 ? C28 ZPG 455 A 1 HETATM 4 C C24 ZPG . . . F 3 20.559 -3.096 2.685 1 66.32 ? C24 ZPG 455 A 1 HETATM 5 O O23 ZPG . . . F 3 20.453 -2.601 4.028 1 67.15 ? O23 ZPG 455 A 1 HETATM 6 C C22 ZPG . . . F 3 21.515 -3.007 4.903 1 65.09 ? C22 ZPG 455 A 1 HETATM 7 C C26 ZPG . . . F 3 21.056 -4.152 5.817 1 63.36 ? C26 ZPG 455 A 1 HETATM 8 C C21 ZPG . . . F 3 21.955 -1.736 5.636 1 63.83 ? C21 ZPG 455 A 1 HETATM 9 O O20 ZPG . . . F 3 22.982 -1.929 6.624 1 63.81 ? O20 ZPG 455 A 1 HETATM 10 C C20 ZPG . . . F 3 24.329 -2.15 6.172 1 62.16 ? C20 ZPG 455 A 1 HETATM 11 C C25 ZPG . . . F 3 25.137 -2.484 7.413 1 62.11 ? C25 ZPG 455 A 1 HETATM 12 C C18 ZPG . . . F 3 24.953 -0.975 5.394 1 62.6 ? C18 ZPG 455 A 1 HETATM 13 O O17 ZPG . . . F 3 25.302 0.164 6.204 1 60.27 ? O17 ZPG 455 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #