data_3Q89 # _model_server_result.job_id 9UfN3_Iss0RaTYcT-HxjDg _model_server_result.datetime_utc '2024-10-18 23:33:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q89 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":159}' # _entry.id 3Q89 # _exptl.entry_id 3Q89 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.23 _cell.angle_gamma 90 _cell.entry_id 3Q89 _cell.length_a 186.613 _cell.length_b 73.055 _cell.length_c 102.272 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q89 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,M 1 1 B,I,J,N 2 1 C,O 3 1 D,P 4 1 E,K,L,Q 5 1 F,R 6 1 G,S 7 1 H,T 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 J O2B CDP . B CDP 158 1_555 I MG MG . B MG 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc2 J O1A CDP . B CDP 158 1_555 I MG MG . B MG 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc3 L O2A CDP . E CDP 158 1_555 K MG MG . E MG 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.998 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3Q89 _atom_sites.fract_transf_matrix[1][1] 0.005359 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001765 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013688 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010295 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 MG B 1 159 159 MG MG . J 3 CDP B 1 158 1 CDP CDP . K 2 MG E 1 159 159 MG MG . L 3 CDP E 1 158 1 CDP CDP . M 4 HOH A 1 158 158 HOH HOH . M 4 HOH A 2 159 159 HOH HOH . M 4 HOH A 3 160 160 HOH HOH . M 4 HOH A 4 161 161 HOH HOH . M 4 HOH A 5 162 162 HOH HOH . M 4 HOH A 6 163 163 HOH HOH . M 4 HOH A 7 164 164 HOH HOH . M 4 HOH A 8 165 165 HOH HOH . M 4 HOH A 9 166 166 HOH HOH . M 4 HOH A 10 167 167 HOH HOH . M 4 HOH A 11 168 168 HOH HOH . M 4 HOH A 12 169 169 HOH HOH . N 4 HOH B 1 160 160 HOH HOH . N 4 HOH B 2 161 161 HOH HOH . N 4 HOH B 3 162 162 HOH HOH . N 4 HOH B 4 163 163 HOH HOH . N 4 HOH B 5 164 164 HOH HOH . N 4 HOH B 6 165 165 HOH HOH . N 4 HOH B 7 166 166 HOH HOH . N 4 HOH B 8 167 167 HOH HOH . N 4 HOH B 9 168 168 HOH HOH . N 4 HOH B 10 169 169 HOH HOH . N 4 HOH B 11 170 170 HOH HOH . N 4 HOH B 12 171 171 HOH HOH . N 4 HOH B 13 172 172 HOH HOH . N 4 HOH B 14 173 173 HOH HOH . N 4 HOH B 15 174 174 HOH HOH . O 4 HOH C 1 158 158 HOH HOH . O 4 HOH C 2 159 159 HOH HOH . O 4 HOH C 3 160 160 HOH HOH . O 4 HOH C 4 161 161 HOH HOH . O 4 HOH C 5 162 162 HOH HOH . O 4 HOH C 6 163 163 HOH HOH . O 4 HOH C 7 164 164 HOH HOH . O 4 HOH C 8 165 165 HOH HOH . O 4 HOH C 9 166 166 HOH HOH . O 4 HOH C 10 167 167 HOH HOH . O 4 HOH C 11 168 168 HOH HOH . P 4 HOH D 1 158 158 HOH HOH . P 4 HOH D 2 159 159 HOH HOH . P 4 HOH D 3 160 160 HOH HOH . P 4 HOH D 4 161 161 HOH HOH . P 4 HOH D 5 162 162 HOH HOH . P 4 HOH D 6 163 163 HOH HOH . P 4 HOH D 7 164 164 HOH HOH . P 4 HOH D 8 165 165 HOH HOH . P 4 HOH D 9 166 166 HOH HOH . Q 4 HOH E 1 160 160 HOH HOH . Q 4 HOH E 2 161 161 HOH HOH . Q 4 HOH E 3 162 162 HOH HOH . Q 4 HOH E 4 163 163 HOH HOH . Q 4 HOH E 5 164 164 HOH HOH . Q 4 HOH E 6 165 165 HOH HOH . Q 4 HOH E 7 166 166 HOH HOH . Q 4 HOH E 8 167 167 HOH HOH . Q 4 HOH E 9 168 168 HOH HOH . R 4 HOH F 1 158 158 HOH HOH . R 4 HOH F 2 159 159 HOH HOH . R 4 HOH F 3 160 160 HOH HOH . R 4 HOH F 4 161 161 HOH HOH . S 4 HOH G 1 158 158 HOH HOH . S 4 HOH G 2 159 159 HOH HOH . S 4 HOH G 3 160 160 HOH HOH . S 4 HOH G 4 161 161 HOH HOH . S 4 HOH G 5 162 162 HOH HOH . T 4 HOH H 1 158 158 HOH HOH . T 4 HOH H 2 159 159 HOH HOH . T 4 HOH H 3 160 160 HOH HOH . T 4 HOH H 4 161 161 HOH HOH . T 4 HOH H 5 162 162 HOH HOH . T 4 HOH H 6 163 163 HOH HOH . T 4 HOH H 7 164 164 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x 47.842 _atom_site.Cartn_y -3.798 _atom_site.Cartn_z 25.107 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 159 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #