data_3Q96 # _model_server_result.job_id 6JN-eraDsavo7gc-e5PABQ _model_server_result.datetime_utc '2025-02-05 06:56:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3Q96 # _exptl.entry_id 3Q96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 538.561 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3Q96 _cell.length_a 94.029 _cell.length_b 94.029 _cell.length_c 165.264 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,C 2 1 B,D 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C29 H29 F3 N4 O3' _chem_comp.formula_weight 538.561 _chem_comp.id 0NF _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 0NF doub 1 n y C4 C10 0NF sing 2 n n C4 C3 0NF sing 3 n y C5 C6 0NF sing 4 n y C5 O11 0NF sing 5 n n C6 C1 0NF doub 6 n y C8 C9 0NF sing 7 n n C8 O31 0NF doub 8 n n C8 N7 0NF sing 9 n n C10 C9 0NF sing 10 n n C13 C14 0NF doub 11 n y C13 C12 0NF sing 12 n y C15 C18 0NF sing 13 n n C15 C16 0NF doub 14 n y C15 C14 0NF sing 15 n y C17 C16 0NF sing 16 n y C17 C12 0NF doub 17 n y C20 C21 0NF sing 18 n n C20 C22 0NF sing 19 n n C20 C19 0NF sing 20 n n C21 C16 0NF sing 21 n n C22 N24 0NF sing 22 n n C22 O23 0NF doub 23 n n C26 C27 0NF doub 24 n y C26 C25 0NF sing 25 n y C28 C29 0NF doub 26 n y C28 C27 0NF sing 27 n y N33 C32 0NF sing 28 n n C32 C38 0NF sing 29 n n C32 C39 0NF sing 30 n n C32 C29 0NF sing 31 n n C29 C30 0NF sing 32 n y C30 C25 0NF doub 33 n y C27 C34 0NF sing 34 n n C34 F37 0NF sing 35 n n C34 F35 0NF sing 36 n n C34 F36 0NF sing 37 n n C25 N24 0NF sing 38 n n C19 C18 0NF sing 39 n n C12 O11 0NF sing 40 n n C1 N2 0NF sing 41 n y N2 C3 0NF doub 42 n y C3 N7 0NF sing 43 n n C6 H6 0NF sing 44 n n C10 H10 0NF sing 45 n n C10 H10A 0NF sing 46 n n C13 H13 0NF sing 47 n n C17 H17 0NF sing 48 n n C20 H20 0NF sing 49 n n C21 H21 0NF sing 50 n n C21 H21A 0NF sing 51 n n C26 H26 0NF sing 52 n n C28 H28 0NF sing 53 n n N33 HN33 0NF sing 54 n n N33 HN3A 0NF sing 55 n n C38 H38 0NF sing 56 n n C38 H38A 0NF sing 57 n n C38 H38B 0NF sing 58 n n C39 H39 0NF sing 59 n n C39 H39A 0NF sing 60 n n C39 H39B 0NF sing 61 n n C30 H30 0NF sing 62 n n N24 HN24 0NF sing 63 n n C19 H19 0NF sing 64 n n C19 H19A 0NF sing 65 n n C18 H18 0NF sing 66 n n C18 H18A 0NF sing 67 n n C14 H14 0NF sing 68 n n C1 H1 0NF sing 69 n n C9 H9 0NF sing 70 n n C9 H9A 0NF sing 71 n n N7 HN7 0NF sing 72 n n # _atom_sites.entry_id 3Q96 _atom_sites.fract_transf_matrix[1][1] 0.010635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0NF A 1 1 1 0NF 0NF . D 2 0NF B 1 1 1 0NF 0NF . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 0NF . . . C 2 21.241 -8.727 -11.292 1 17.78 ? C4 0NF 1 A 1 HETATM 2 C C5 0NF . . . C 2 22.368 -7.984 -10.929 1 18.67 ? C5 0NF 1 A 1 HETATM 3 C C6 0NF . . . C 2 23.518 -8.628 -10.467 1 18.23 ? C6 0NF 1 A 1 HETATM 4 C C8 0NF . . . C 2 18.957 -10.374 -11.697 1 18.07 ? C8 0NF 1 A 1 HETATM 5 C C10 0NF . . . C 2 19.969 -8.027 -11.803 1 16.76 ? C10 0NF 1 A 1 HETATM 6 C C13 0NF . . . C 2 24.177 -5.359 -11.743 1 21.49 ? C13 0NF 1 A 1 HETATM 7 C C15 0NF . . . C 2 25.341 -3.974 -10.13 1 22.07 ? C15 0NF 1 A 1 HETATM 8 C C17 0NF . . . C 2 23.427 -5.275 -9.448 1 21.96 ? C17 0NF 1 A 1 HETATM 9 C C20 0NF . . . C 2 25.615 -2.794 -7.48 1 23.52 ? C20 0NF 1 A 1 HETATM 10 C C21 0NF . . . C 2 24.549 -3.889 -7.678 1 22.7 ? C21 0NF 1 A 1 HETATM 11 C C22 0NF . . . C 2 26.059 -2.752 -6.019 1 24.97 ? C22 0NF 1 A 1 HETATM 12 C C26 0NF . . . C 2 27.082 -2.165 -3.405 1 29.09 ? C26 0NF 1 A 1 HETATM 13 C C28 0NF . . . C 2 27.55 -0.454 -1.768 1 29.84 ? C28 0NF 1 A 1 HETATM 14 N N33 0NF . . . C 2 26.1 2.263 -1.372 1 29.9 ? N33 0NF 1 A 1 HETATM 15 C C32 0NF . . . C 2 27.25 2.016 -2.25 1 29.54 ? C32 0NF 1 A 1 HETATM 16 C C38 0NF . . . C 2 28.53 2.289 -1.454 1 29.47 ? C38 0NF 1 A 1 HETATM 17 C C39 0NF . . . C 2 27.169 2.948 -3.464 1 29.37 ? C39 0NF 1 A 1 HETATM 18 C C29 0NF . . . C 2 27.191 0.535 -2.678 1 29.62 ? C29 0NF 1 A 1 HETATM 19 C C30 0NF . . . C 2 26.767 0.152 -3.954 1 29.07 ? C30 0NF 1 A 1 HETATM 20 C C27 0NF . . . C 2 27.498 -1.792 -2.137 1 30.3 ? C27 0NF 1 A 1 HETATM 21 C C34 0NF . . . C 2 27.888 -2.871 -1.149 1 31.48 ? C34 0NF 1 A 1 HETATM 22 F F37 0NF . . . C 2 28.263 -2.292 -0.009 1 32.63 ? F37 0NF 1 A 1 HETATM 23 F F35 0NF . . . C 2 26.827 -3.661 -0.956 1 31.61 ? F35 0NF 1 A 1 HETATM 24 F F36 0NF . . . C 2 28.904 -3.572 -1.652 1 32.07 ? F36 0NF 1 A 1 HETATM 25 C C25 0NF . . . C 2 26.714 -1.195 -4.326 1 28.23 ? C25 0NF 1 A 1 HETATM 26 N N24 0NF . . . C 2 26.311 -1.52 -5.561 1 26.96 ? N24 0NF 1 A 1 HETATM 27 O O23 0NF . . . C 2 26.172 -3.792 -5.372 1 25.52 ? O23 0NF 1 A 1 HETATM 28 C C19 0NF . . . C 2 26.846 -3.028 -8.363 1 22.64 ? C19 0NF 1 A 1 HETATM 29 C C18 0NF . . . C 2 26.483 -3 -9.848 1 22.41 ? C18 0NF 1 A 1 HETATM 30 C C16 0NF . . . C 2 24.452 -4.378 -9.131 1 22.38 ? C16 0NF 1 A 1 HETATM 31 C C14 0NF . . . C 2 25.199 -4.467 -11.427 1 21.69 ? C14 0NF 1 A 1 HETATM 32 C C12 0NF . . . C 2 23.295 -5.777 -10.745 1 21.41 ? C12 0NF 1 A 1 HETATM 33 O O11 0NF . . . C 2 22.273 -6.63 -11.049 1 20.19 ? O11 0NF 1 A 1 HETATM 34 C C1 0NF . . . C 2 23.529 -10.016 -10.38 1 17.75 ? C1 0NF 1 A 1 HETATM 35 N N2 0NF . . . C 2 22.458 -10.711 -10.727 1 17.5 ? N2 0NF 1 A 1 HETATM 36 C C3 0NF . . . C 2 21.336 -10.117 -11.174 1 17.47 ? C3 0NF 1 A 1 HETATM 37 C C9 0NF . . . C 2 18.706 -8.859 -11.575 1 17.44 ? C9 0NF 1 A 1 HETATM 38 O O31 0NF . . . C 2 18.015 -11.122 -11.967 1 18.51 ? O31 0NF 1 A 1 HETATM 39 N N7 0NF . . . C 2 20.243 -10.923 -11.509 1 17.7 ? N7 0NF 1 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 39 #