data_3Q96
#
_model_server_result.job_id            2W3gT3ncvWRIdeb02CUE8Q 
_model_server_result.datetime_utc      '2025-02-05 06:52:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3q96 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    3Q96 
#
_exptl.entry_id    3Q96 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              538.561 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3Q96 
_cell.length_a            94.029 
_cell.length_b            94.029 
_cell.length_c            165.264 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3Q96 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D 1 1 
A,C 2 1 
B,D 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C29 H29 F3 N4 O3' 
_chem_comp.formula_weight    538.561 
_chem_comp.id                0NF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 C5 0NF doub 1 n y 
C4 C10 0NF sing 2 n n 
C4 C3 0NF sing 3 n y 
C5 C6 0NF sing 4 n y 
C5 O11 0NF sing 5 n n 
C6 C1 0NF doub 6 n y 
C8 C9 0NF sing 7 n n 
C8 O31 0NF doub 8 n n 
C8 N7 0NF sing 9 n n 
C10 C9 0NF sing 10 n n 
C13 C14 0NF doub 11 n y 
C13 C12 0NF sing 12 n y 
C15 C18 0NF sing 13 n n 
C15 C16 0NF doub 14 n y 
C15 C14 0NF sing 15 n y 
C17 C16 0NF sing 16 n y 
C17 C12 0NF doub 17 n y 
C20 C21 0NF sing 18 n n 
C20 C22 0NF sing 19 n n 
C20 C19 0NF sing 20 n n 
C21 C16 0NF sing 21 n n 
C22 N24 0NF sing 22 n n 
C22 O23 0NF doub 23 n n 
C26 C27 0NF doub 24 n y 
C26 C25 0NF sing 25 n y 
C28 C29 0NF doub 26 n y 
C28 C27 0NF sing 27 n y 
N33 C32 0NF sing 28 n n 
C32 C38 0NF sing 29 n n 
C32 C39 0NF sing 30 n n 
C32 C29 0NF sing 31 n n 
C29 C30 0NF sing 32 n y 
C30 C25 0NF doub 33 n y 
C27 C34 0NF sing 34 n n 
C34 F37 0NF sing 35 n n 
C34 F35 0NF sing 36 n n 
C34 F36 0NF sing 37 n n 
C25 N24 0NF sing 38 n n 
C19 C18 0NF sing 39 n n 
C12 O11 0NF sing 40 n n 
C1 N2 0NF sing 41 n y 
N2 C3 0NF doub 42 n y 
C3 N7 0NF sing 43 n n 
C6 H6 0NF sing 44 n n 
C10 H10 0NF sing 45 n n 
C10 H10A 0NF sing 46 n n 
C13 H13 0NF sing 47 n n 
C17 H17 0NF sing 48 n n 
C20 H20 0NF sing 49 n n 
C21 H21 0NF sing 50 n n 
C21 H21A 0NF sing 51 n n 
C26 H26 0NF sing 52 n n 
C28 H28 0NF sing 53 n n 
N33 HN33 0NF sing 54 n n 
N33 HN3A 0NF sing 55 n n 
C38 H38 0NF sing 56 n n 
C38 H38A 0NF sing 57 n n 
C38 H38B 0NF sing 58 n n 
C39 H39 0NF sing 59 n n 
C39 H39A 0NF sing 60 n n 
C39 H39B 0NF sing 61 n n 
C30 H30 0NF sing 62 n n 
N24 HN24 0NF sing 63 n n 
C19 H19 0NF sing 64 n n 
C19 H19A 0NF sing 65 n n 
C18 H18 0NF sing 66 n n 
C18 H18A 0NF sing 67 n n 
C14 H14 0NF sing 68 n n 
C1 H1 0NF sing 69 n n 
C9 H9 0NF sing 70 n n 
C9 H9A 0NF sing 71 n n 
N7 HN7 0NF sing 72 n n 
#
_atom_sites.entry_id                     3Q96 
_atom_sites.fract_transf_matrix[1][1]    0.010635 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010635 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006051 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0NF A 1 1 1 0NF 0NF . 
D 2 0NF B 1 1 1 0NF 0NF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 0NF . . . D 2 39.573 -26.806 -1.17 1 19.17 ? C4 0NF 1 B 1 
HETATM 2 C C5 0NF . . . D 2 40.423 -25.774 -1.584 1 19.9 ? C5 0NF 1 B 1 
HETATM 3 C C6 0NF . . . D 2 39.866 -24.603 -2.099 1 19.74 ? C6 0NF 1 B 1 
HETATM 4 C C8 0NF . . . D 2 37.718 -28.933 -0.784 1 19.83 ? C8 0NF 1 B 1 
HETATM 5 C C10 0NF . . . D 2 40.102 -28.124 -0.603 1 18.89 ? C10 0NF 1 B 1 
HETATM 6 C C13 0NF . . . D 2 43.131 -24.043 -0.935 1 22.18 ? C13 0NF 1 B 1 
HETATM 7 C C15 0NF . . . D 2 44.351 -22.865 -2.675 1 23.38 ? C15 0NF 1 B 1 
HETATM 8 C C17 0NF . . . D 2 42.986 -24.773 -3.226 1 22.58 ? C17 0NF 1 B 1 
HETATM 9 C C20 0NF . . . D 2 45.259 -22.54 -5.44 1 24.59 ? C20 0NF 1 B 1 
HETATM 10 C C21 0NF . . . D 2 44.199 -23.632 -5.133 1 23.67 ? C21 0NF 1 B 1 
HETATM 11 C C22 0NF . . . D 2 45.171 -22.088 -6.908 1 25.97 ? C22 0NF 1 B 1 
HETATM 12 C C26 0NF . . . D 2 45.547 -20.891 -9.566 1 27.73 ? C26 0NF 1 B 1 
HETATM 13 C C28 0NF . . . D 2 47.158 -20.424 -11.306 1 28.08 ? C28 0NF 1 B 1 
HETATM 14 N N33 0NF . . . D 2 49.935 -22.054 -11.58 1 27.79 ? N33 0NF 1 B 1 
HETATM 15 C C32 0NF . . . D 2 49.651 -20.744 -10.989 1 27.64 ? C32 0NF 1 B 1 
HETATM 16 C C38 0NF . . . D 2 49.789 -19.682 -12.091 1 27.35 ? C38 0NF 1 B 1 
HETATM 17 C C39 0NF . . . D 2 50.652 -20.492 -9.851 1 27.3 ? C39 0NF 1 B 1 
HETATM 18 C C29 0NF . . . D 2 48.199 -20.795 -10.462 1 27.78 ? C29 0NF 1 B 1 
HETATM 19 C C30 0NF . . . D 2 47.894 -21.227 -9.163 1 27.59 ? C30 0NF 1 B 1 
HETATM 20 C C27 0NF . . . D 2 45.84 -20.463 -10.862 1 28.65 ? C27 0NF 1 B 1 
HETATM 21 C C34 0NF . . . D 2 44.723 -20.045 -11.824 1 29.29 ? C34 0NF 1 B 1 
HETATM 22 F F37 0NF . . . D 2 44.358 -21.133 -12.503 1 29.16 ? F37 0NF 1 B 1 
HETATM 23 F F35 0NF . . . D 2 43.685 -19.513 -11.157 1 29.57 ? F35 0NF 1 B 1 
HETATM 24 F F36 0NF . . . D 2 45.196 -19.156 -12.69 1 29.59 ? F36 0NF 1 B 1 
HETATM 25 C C25 0NF . . . D 2 46.574 -21.278 -8.703 1 27.21 ? C25 0NF 1 B 1 
HETATM 26 N N24 0NF . . . D 2 46.345 -21.701 -7.443 1 26.97 ? N24 0NF 1 B 1 
HETATM 27 O O23 0NF . . . D 2 44.085 -22.087 -7.492 1 26.78 ? O23 0NF 1 B 1 
HETATM 28 C C19 0NF . . . D 2 45.114 -21.318 -4.517 1 23.96 ? C19 0NF 1 B 1 
HETATM 29 C C18 0NF . . . D 2 45.298 -21.711 -3.043 1 23.84 ? C18 0NF 1 B 1 
HETATM 30 C C16 0NF . . . D 2 43.849 -23.748 -3.633 1 23.24 ? C16 0NF 1 B 1 
HETATM 31 C C14 0NF . . . D 2 43.987 -23.02 -1.336 1 22.85 ? C14 0NF 1 B 1 
HETATM 32 C C12 0NF . . . D 2 42.617 -24.921 -1.882 1 21.93 ? C12 0NF 1 B 1 
HETATM 33 O O11 0NF . . . D 2 41.784 -25.933 -1.475 1 20.88 ? O11 0NF 1 B 1 
HETATM 34 C C1 0NF . . . D 2 38.485 -24.468 -2.189 1 19.22 ? C1 0NF 1 B 1 
HETATM 35 N N2 0NF . . . D 2 37.698 -25.447 -1.791 1 19.14 ? N2 0NF 1 B 1 
HETATM 36 C C3 0NF . . . D 2 38.197 -26.592 -1.292 1 19.29 ? C3 0NF 1 B 1 
HETATM 37 C C9 0NF . . . D 2 39.193 -29.292 -0.993 1 19.39 ? C9 0NF 1 B 1 
HETATM 38 O O31 0NF . . . D 2 36.908 -29.808 -0.47 1 20.21 ? O31 0NF 1 B 1 
HETATM 39 N N7 0NF . . . D 2 37.295 -27.598 -0.911 1 19.73 ? N7 0NF 1 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#