data_3Q9L # _model_server_result.job_id aiFso22X1ZyPKevS-O_JSA _model_server_result.datetime_utc '2025-02-05 14:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q9l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 3Q9L # _exptl.entry_id 3Q9L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3Q9L _cell.length_a 83.664 _cell.length_b 86.595 _cell.length_c 110.714 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q9L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,C,D,G 2 1 B,E,F,H 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 17 A THR 17 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc2 G O HOH . A HOH 261 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc3 G O HOH . A HOH 262 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc4 G O HOH . A HOH 263 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc5 C MG MG . A MG 700 1_555 D O1G ATP . A ATP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc6 C MG MG . A MG 700 1_555 D O1B ATP . A ATP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc7 B OG1 THR 17 B THR 17 1_555 E MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc8 H O HOH . B HOH 261 1_555 E MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc9 H O HOH . B HOH 262 1_555 E MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc10 H O HOH . B HOH 263 1_555 E MG MG . B MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc11 E MG MG . B MG 700 1_555 F O1G ATP . B ATP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc12 E MG MG . B MG 700 1_555 F O1B ATP . B ATP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3Q9L _atom_sites.fract_transf_matrix[1][1] 0.011953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011548 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009032 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 700 700 MG MG . D 3 ATP A 1 800 800 ATP ATP . E 2 MG B 1 700 700 MG MG . F 3 ATP B 1 800 800 ATP ATP . G 4 HOH A 1 261 1 HOH HOH . G 4 HOH A 2 262 2 HOH HOH . G 4 HOH A 3 263 3 HOH HOH . G 4 HOH A 4 264 10 HOH HOH . G 4 HOH A 5 265 11 HOH HOH . G 4 HOH A 6 266 12 HOH HOH . G 4 HOH A 7 267 15 HOH HOH . G 4 HOH A 8 268 19 HOH HOH . G 4 HOH A 9 269 23 HOH HOH . G 4 HOH A 10 270 24 HOH HOH . G 4 HOH A 11 271 25 HOH HOH . G 4 HOH A 12 272 26 HOH HOH . G 4 HOH A 13 273 27 HOH HOH . G 4 HOH A 14 274 28 HOH HOH . G 4 HOH A 15 275 29 HOH HOH . G 4 HOH A 16 276 31 HOH HOH . G 4 HOH A 17 277 32 HOH HOH . G 4 HOH A 18 278 34 HOH HOH . G 4 HOH A 19 279 35 HOH HOH . G 4 HOH A 20 280 36 HOH HOH . G 4 HOH A 21 281 40 HOH HOH . G 4 HOH A 22 282 45 HOH HOH . G 4 HOH A 23 283 48 HOH HOH . G 4 HOH A 24 284 49 HOH HOH . G 4 HOH A 25 285 50 HOH HOH . G 4 HOH A 26 286 53 HOH HOH . G 4 HOH A 27 287 54 HOH HOH . G 4 HOH A 28 288 56 HOH HOH . G 4 HOH A 29 289 59 HOH HOH . G 4 HOH A 30 290 63 HOH HOH . G 4 HOH A 31 291 65 HOH HOH . G 4 HOH A 32 292 66 HOH HOH . G 4 HOH A 33 293 67 HOH HOH . G 4 HOH A 34 294 69 HOH HOH . G 4 HOH A 35 295 71 HOH HOH . G 4 HOH A 36 296 72 HOH HOH . G 4 HOH A 37 297 73 HOH HOH . G 4 HOH A 38 298 74 HOH HOH . G 4 HOH A 39 299 75 HOH HOH . G 4 HOH A 40 300 76 HOH HOH . G 4 HOH A 41 301 81 HOH HOH . G 4 HOH A 42 302 82 HOH HOH . G 4 HOH A 43 303 83 HOH HOH . G 4 HOH A 44 304 84 HOH HOH . G 4 HOH A 45 305 86 HOH HOH . G 4 HOH A 46 306 88 HOH HOH . G 4 HOH A 47 307 90 HOH HOH . G 4 HOH A 48 308 94 HOH HOH . G 4 HOH A 49 309 95 HOH HOH . G 4 HOH A 50 310 96 HOH HOH . G 4 HOH A 51 311 100 HOH HOH . G 4 HOH A 52 312 101 HOH HOH . G 4 HOH A 53 313 102 HOH HOH . G 4 HOH A 54 314 104 HOH HOH . G 4 HOH A 55 315 105 HOH HOH . G 4 HOH A 56 316 108 HOH HOH . G 4 HOH A 57 317 110 HOH HOH . G 4 HOH A 58 318 111 HOH HOH . G 4 HOH A 59 319 112 HOH HOH . G 4 HOH A 60 320 113 HOH HOH . G 4 HOH A 61 321 115 HOH HOH . G 4 HOH A 62 322 117 HOH HOH . G 4 HOH A 63 323 119 HOH HOH . G 4 HOH A 64 324 120 HOH HOH . G 4 HOH A 65 325 121 HOH HOH . G 4 HOH A 66 326 125 HOH HOH . G 4 HOH A 67 327 129 HOH HOH . G 4 HOH A 68 328 131 HOH HOH . G 4 HOH A 69 329 132 HOH HOH . G 4 HOH A 70 330 133 HOH HOH . G 4 HOH A 71 331 136 HOH HOH . G 4 HOH A 72 332 138 HOH HOH . G 4 HOH A 73 333 139 HOH HOH . G 4 HOH A 74 334 141 HOH HOH . G 4 HOH A 75 335 143 HOH HOH . G 4 HOH A 76 336 144 HOH HOH . G 4 HOH A 77 337 145 HOH HOH . G 4 HOH A 78 338 147 HOH HOH . G 4 HOH A 79 339 149 HOH HOH . G 4 HOH A 80 340 150 HOH HOH . G 4 HOH A 81 341 151 HOH HOH . G 4 HOH A 82 342 152 HOH HOH . G 4 HOH A 83 343 157 HOH HOH . G 4 HOH A 84 344 158 HOH HOH . G 4 HOH A 85 345 160 HOH HOH . G 4 HOH A 86 346 163 HOH HOH . G 4 HOH A 87 347 165 HOH HOH . G 4 HOH A 88 348 166 HOH HOH . G 4 HOH A 89 349 169 HOH HOH . G 4 HOH A 90 350 170 HOH HOH . G 4 HOH A 91 351 171 HOH HOH . G 4 HOH A 92 352 172 HOH HOH . G 4 HOH A 93 353 176 HOH HOH . G 4 HOH A 94 354 177 HOH HOH . G 4 HOH A 95 355 179 HOH HOH . G 4 HOH A 96 356 180 HOH HOH . G 4 HOH A 97 357 182 HOH HOH . G 4 HOH A 98 358 183 HOH HOH . G 4 HOH A 99 359 184 HOH HOH . G 4 HOH A 100 360 187 HOH HOH . G 4 HOH A 101 361 192 HOH HOH . G 4 HOH A 102 362 194 HOH HOH . G 4 HOH A 103 363 195 HOH HOH . G 4 HOH A 104 364 196 HOH HOH . G 4 HOH A 105 365 197 HOH HOH . G 4 HOH A 106 366 200 HOH HOH . G 4 HOH A 107 367 201 HOH HOH . G 4 HOH A 108 368 202 HOH HOH . G 4 HOH A 109 369 203 HOH HOH . G 4 HOH A 110 370 208 HOH HOH . G 4 HOH A 111 371 209 HOH HOH . G 4 HOH A 112 372 210 HOH HOH . G 4 HOH A 113 373 212 HOH HOH . G 4 HOH A 114 374 213 HOH HOH . G 4 HOH A 115 375 214 HOH HOH . G 4 HOH A 116 376 215 HOH HOH . G 4 HOH A 117 377 217 HOH HOH . G 4 HOH A 118 378 220 HOH HOH . G 4 HOH A 119 379 221 HOH HOH . G 4 HOH A 120 380 222 HOH HOH . G 4 HOH A 121 381 223 HOH HOH . G 4 HOH A 122 382 227 HOH HOH . G 4 HOH A 123 383 228 HOH HOH . G 4 HOH A 124 384 229 HOH HOH . G 4 HOH A 125 385 231 HOH HOH . G 4 HOH A 126 386 232 HOH HOH . G 4 HOH A 127 387 234 HOH HOH . G 4 HOH A 128 388 235 HOH HOH . G 4 HOH A 129 389 236 HOH HOH . G 4 HOH A 130 390 237 HOH HOH . H 4 HOH B 1 261 4 HOH HOH . H 4 HOH B 2 262 5 HOH HOH . H 4 HOH B 3 263 6 HOH HOH . H 4 HOH B 4 264 7 HOH HOH . H 4 HOH B 5 265 8 HOH HOH . H 4 HOH B 6 266 9 HOH HOH . H 4 HOH B 7 267 13 HOH HOH . H 4 HOH B 8 268 14 HOH HOH . H 4 HOH B 9 269 16 HOH HOH . H 4 HOH B 10 270 17 HOH HOH . H 4 HOH B 11 271 18 HOH HOH . H 4 HOH B 12 272 20 HOH HOH . H 4 HOH B 13 273 21 HOH HOH . H 4 HOH B 14 274 22 HOH HOH . H 4 HOH B 15 275 30 HOH HOH . H 4 HOH B 16 276 33 HOH HOH . H 4 HOH B 17 277 37 HOH HOH . H 4 HOH B 18 278 38 HOH HOH . H 4 HOH B 19 279 39 HOH HOH . H 4 HOH B 20 280 41 HOH HOH . H 4 HOH B 21 281 42 HOH HOH . H 4 HOH B 22 282 43 HOH HOH . H 4 HOH B 23 283 44 HOH HOH . H 4 HOH B 24 284 46 HOH HOH . H 4 HOH B 25 285 47 HOH HOH . H 4 HOH B 26 286 51 HOH HOH . H 4 HOH B 27 287 52 HOH HOH . H 4 HOH B 28 288 55 HOH HOH . H 4 HOH B 29 289 57 HOH HOH . H 4 HOH B 30 290 58 HOH HOH . H 4 HOH B 31 291 60 HOH HOH . H 4 HOH B 32 292 61 HOH HOH . H 4 HOH B 33 293 62 HOH HOH . H 4 HOH B 34 294 64 HOH HOH . H 4 HOH B 35 295 68 HOH HOH . H 4 HOH B 36 296 70 HOH HOH . H 4 HOH B 37 297 77 HOH HOH . H 4 HOH B 38 298 78 HOH HOH . H 4 HOH B 39 299 79 HOH HOH . H 4 HOH B 40 300 80 HOH HOH . H 4 HOH B 41 301 85 HOH HOH . H 4 HOH B 42 302 87 HOH HOH . H 4 HOH B 43 303 89 HOH HOH . H 4 HOH B 44 304 91 HOH HOH . H 4 HOH B 45 305 92 HOH HOH . H 4 HOH B 46 306 93 HOH HOH . H 4 HOH B 47 307 97 HOH HOH . H 4 HOH B 48 308 98 HOH HOH . H 4 HOH B 49 309 99 HOH HOH . H 4 HOH B 50 310 103 HOH HOH . H 4 HOH B 51 311 106 HOH HOH . H 4 HOH B 52 312 107 HOH HOH . H 4 HOH B 53 313 109 HOH HOH . H 4 HOH B 54 314 114 HOH HOH . H 4 HOH B 55 315 116 HOH HOH . H 4 HOH B 56 316 118 HOH HOH . H 4 HOH B 57 317 122 HOH HOH . H 4 HOH B 58 318 123 HOH HOH . H 4 HOH B 59 319 124 HOH HOH . H 4 HOH B 60 320 126 HOH HOH . H 4 HOH B 61 321 127 HOH HOH . H 4 HOH B 62 322 128 HOH HOH . H 4 HOH B 63 323 130 HOH HOH . H 4 HOH B 64 324 134 HOH HOH . H 4 HOH B 65 325 135 HOH HOH . H 4 HOH B 66 326 137 HOH HOH . H 4 HOH B 67 327 140 HOH HOH . H 4 HOH B 68 328 142 HOH HOH . H 4 HOH B 69 329 146 HOH HOH . H 4 HOH B 70 330 148 HOH HOH . H 4 HOH B 71 331 153 HOH HOH . H 4 HOH B 72 332 154 HOH HOH . H 4 HOH B 73 333 155 HOH HOH . H 4 HOH B 74 334 156 HOH HOH . H 4 HOH B 75 335 159 HOH HOH . H 4 HOH B 76 336 161 HOH HOH . H 4 HOH B 77 337 162 HOH HOH . H 4 HOH B 78 338 164 HOH HOH . H 4 HOH B 79 339 167 HOH HOH . H 4 HOH B 80 340 168 HOH HOH . H 4 HOH B 81 341 173 HOH HOH . H 4 HOH B 82 342 174 HOH HOH . H 4 HOH B 83 343 175 HOH HOH . H 4 HOH B 84 344 178 HOH HOH . H 4 HOH B 85 345 181 HOH HOH . H 4 HOH B 86 346 185 HOH HOH . H 4 HOH B 87 347 186 HOH HOH . H 4 HOH B 88 348 188 HOH HOH . H 4 HOH B 89 349 189 HOH HOH . H 4 HOH B 90 350 190 HOH HOH . H 4 HOH B 91 351 191 HOH HOH . H 4 HOH B 92 352 193 HOH HOH . H 4 HOH B 93 353 198 HOH HOH . H 4 HOH B 94 354 199 HOH HOH . H 4 HOH B 95 355 204 HOH HOH . H 4 HOH B 96 356 205 HOH HOH . H 4 HOH B 97 357 206 HOH HOH . H 4 HOH B 98 358 207 HOH HOH . H 4 HOH B 99 359 211 HOH HOH . H 4 HOH B 100 360 216 HOH HOH . H 4 HOH B 101 361 218 HOH HOH . H 4 HOH B 102 362 219 HOH HOH . H 4 HOH B 103 363 224 HOH HOH . H 4 HOH B 104 364 225 HOH HOH . H 4 HOH B 105 365 226 HOH HOH . H 4 HOH B 106 366 230 HOH HOH . H 4 HOH B 107 367 233 HOH HOH . H 4 HOH B 108 368 238 HOH HOH . H 4 HOH B 109 369 239 HOH HOH . H 4 HOH B 110 370 240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 45.676 _atom_site.Cartn_y 56.146 _atom_site.Cartn_z 15.35 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 700 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #