data_3Q9N # _model_server_result.job_id egZ4Ng6SWt0Z9Hja7kcEeQ _model_server_result.datetime_utc '2025-03-04 22:25:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3q9n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1071}' # _entry.id 3Q9N # _exptl.entry_id 3Q9N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 132.118 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBAMOYL SARCOSINE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 89.78 _cell.angle_beta 112.42 _cell.angle_gamma 90.03 _cell.entry_id 3Q9N _cell.length_a 53.122 _cell.length_b 56.556 _cell.length_c 56.977 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3Q9N _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,H,J 1 1 B,D,G,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H8 N2 O3' _chem_comp.formula_weight 132.118 _chem_comp.id CMS _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBAMOYL SARCOSINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 CMS sing 70 n n C1 N3 CMS sing 71 n n C1 O3 CMS doub 72 n n C2 N3 CMS sing 73 n n C2 H21 CMS sing 74 n n C2 H22 CMS sing 75 n n C2 H23 CMS sing 76 n n C3 C4 CMS sing 77 n n C3 N3 CMS sing 78 n n C3 H31 CMS sing 79 n n C3 H32 CMS sing 80 n n C4 O1 CMS doub 81 n n C4 O2 CMS sing 82 n n N1 HN11 CMS sing 83 n n N1 HN12 CMS sing 84 n n O2 HO2 CMS sing 85 n n # _atom_sites.entry_id 3Q9N _atom_sites.fract_transf_matrix[1][1] 0.018825 _atom_sites.fract_transf_matrix[1][2] 0.00001 _atom_sites.fract_transf_matrix[1][3] 0.007767 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017682 _atom_sites.fract_transf_matrix[2][3] -0.00007 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CMS A 1 1071 1071 CMS CMS . F 4 COA A 1 1072 1072 COA COA . G 4 COA B 1 1072 1072 COA COA . H 5 HOH A 1 141 141 HOH HOH . H 5 HOH A 2 142 142 HOH HOH . H 5 HOH A 3 143 143 HOH HOH . H 5 HOH A 4 144 144 HOH HOH . H 5 HOH A 5 145 145 HOH HOH . H 5 HOH A 6 146 146 HOH HOH . H 5 HOH A 7 147 147 HOH HOH . H 5 HOH A 8 148 148 HOH HOH . H 5 HOH A 9 149 149 HOH HOH . H 5 HOH A 10 150 150 HOH HOH . H 5 HOH A 11 151 151 HOH HOH . H 5 HOH A 12 152 152 HOH HOH . H 5 HOH A 13 153 153 HOH HOH . H 5 HOH A 14 154 154 HOH HOH . H 5 HOH A 15 155 155 HOH HOH . H 5 HOH A 16 156 156 HOH HOH . H 5 HOH A 17 157 157 HOH HOH . H 5 HOH A 18 158 158 HOH HOH . H 5 HOH A 19 159 159 HOH HOH . H 5 HOH A 20 160 160 HOH HOH . H 5 HOH A 21 161 161 HOH HOH . H 5 HOH A 22 162 162 HOH HOH . H 5 HOH A 23 163 163 HOH HOH . H 5 HOH A 24 164 164 HOH HOH . H 5 HOH A 25 165 165 HOH HOH . H 5 HOH A 26 166 166 HOH HOH . H 5 HOH A 27 167 167 HOH HOH . H 5 HOH A 28 168 168 HOH HOH . H 5 HOH A 29 169 169 HOH HOH . H 5 HOH A 30 170 170 HOH HOH . H 5 HOH A 31 171 171 HOH HOH . H 5 HOH A 32 172 172 HOH HOH . H 5 HOH A 33 173 173 HOH HOH . H 5 HOH A 34 174 174 HOH HOH . H 5 HOH A 35 175 175 HOH HOH . H 5 HOH A 36 176 176 HOH HOH . H 5 HOH A 37 177 177 HOH HOH . H 5 HOH A 38 178 178 HOH HOH . H 5 HOH A 39 179 179 HOH HOH . H 5 HOH A 40 180 180 HOH HOH . H 5 HOH A 41 181 181 HOH HOH . H 5 HOH A 42 182 182 HOH HOH . H 5 HOH A 43 183 183 HOH HOH . H 5 HOH A 44 184 184 HOH HOH . H 5 HOH A 45 185 185 HOH HOH . H 5 HOH A 46 186 186 HOH HOH . H 5 HOH A 47 187 187 HOH HOH . H 5 HOH A 48 188 188 HOH HOH . H 5 HOH A 49 189 189 HOH HOH . H 5 HOH A 50 190 190 HOH HOH . H 5 HOH A 51 191 191 HOH HOH . H 5 HOH A 52 192 192 HOH HOH . H 5 HOH A 53 193 193 HOH HOH . H 5 HOH A 54 194 194 HOH HOH . H 5 HOH A 55 195 195 HOH HOH . H 5 HOH A 56 196 196 HOH HOH . H 5 HOH A 57 197 197 HOH HOH . H 5 HOH A 58 198 198 HOH HOH . H 5 HOH A 59 199 199 HOH HOH . H 5 HOH A 60 200 200 HOH HOH . H 5 HOH A 61 201 201 HOH HOH . H 5 HOH A 62 202 202 HOH HOH . H 5 HOH A 63 203 203 HOH HOH . H 5 HOH A 64 204 204 HOH HOH . H 5 HOH A 65 205 205 HOH HOH . H 5 HOH A 66 206 206 HOH HOH . H 5 HOH A 67 207 207 HOH HOH . H 5 HOH A 68 208 208 HOH HOH . H 5 HOH A 69 209 209 HOH HOH . H 5 HOH A 70 210 210 HOH HOH . H 5 HOH A 71 211 211 HOH HOH . H 5 HOH A 72 212 212 HOH HOH . H 5 HOH A 73 213 213 HOH HOH . H 5 HOH A 74 214 214 HOH HOH . H 5 HOH A 75 215 215 HOH HOH . H 5 HOH A 76 216 216 HOH HOH . H 5 HOH A 77 217 217 HOH HOH . H 5 HOH A 78 218 218 HOH HOH . H 5 HOH A 79 219 219 HOH HOH . H 5 HOH A 80 222 222 HOH HOH . H 5 HOH A 81 223 223 HOH HOH . H 5 HOH A 82 224 224 HOH HOH . H 5 HOH A 83 225 225 HOH HOH . H 5 HOH A 84 234 234 HOH HOH . H 5 HOH A 85 237 237 HOH HOH . H 5 HOH A 86 238 238 HOH HOH . H 5 HOH A 87 240 240 HOH HOH . H 5 HOH A 88 246 246 HOH HOH . H 5 HOH A 89 247 247 HOH HOH . H 5 HOH A 90 254 254 HOH HOH . H 5 HOH A 91 258 258 HOH HOH . H 5 HOH A 92 265 265 HOH HOH . H 5 HOH A 93 269 269 HOH HOH . H 5 HOH A 94 272 272 HOH HOH . H 5 HOH A 95 274 274 HOH HOH . H 5 HOH A 96 276 276 HOH HOH . I 5 HOH B 1 141 141 HOH HOH . I 5 HOH B 2 142 142 HOH HOH . I 5 HOH B 3 143 143 HOH HOH . I 5 HOH B 4 144 144 HOH HOH . I 5 HOH B 5 145 145 HOH HOH . I 5 HOH B 6 146 146 HOH HOH . I 5 HOH B 7 147 147 HOH HOH . I 5 HOH B 8 148 148 HOH HOH . I 5 HOH B 9 149 149 HOH HOH . I 5 HOH B 10 150 150 HOH HOH . I 5 HOH B 11 151 151 HOH HOH . I 5 HOH B 12 152 152 HOH HOH . I 5 HOH B 13 153 153 HOH HOH . I 5 HOH B 14 154 154 HOH HOH . I 5 HOH B 15 155 155 HOH HOH . I 5 HOH B 16 156 156 HOH HOH . I 5 HOH B 17 157 157 HOH HOH . I 5 HOH B 18 158 158 HOH HOH . I 5 HOH B 19 159 159 HOH HOH . I 5 HOH B 20 160 160 HOH HOH . I 5 HOH B 21 161 161 HOH HOH . I 5 HOH B 22 162 162 HOH HOH . I 5 HOH B 23 163 163 HOH HOH . I 5 HOH B 24 164 164 HOH HOH . I 5 HOH B 25 165 165 HOH HOH . I 5 HOH B 26 166 166 HOH HOH . I 5 HOH B 27 167 167 HOH HOH . I 5 HOH B 28 168 168 HOH HOH . I 5 HOH B 29 169 169 HOH HOH . I 5 HOH B 30 170 170 HOH HOH . I 5 HOH B 31 171 171 HOH HOH . I 5 HOH B 32 172 172 HOH HOH . I 5 HOH B 33 173 173 HOH HOH . I 5 HOH B 34 174 174 HOH HOH . I 5 HOH B 35 175 175 HOH HOH . I 5 HOH B 36 176 176 HOH HOH . I 5 HOH B 37 177 177 HOH HOH . I 5 HOH B 38 178 178 HOH HOH . I 5 HOH B 39 179 179 HOH HOH . I 5 HOH B 40 181 181 HOH HOH . I 5 HOH B 41 186 186 HOH HOH . I 5 HOH B 42 188 188 HOH HOH . I 5 HOH B 43 190 190 HOH HOH . I 5 HOH B 44 194 194 HOH HOH . I 5 HOH B 45 198 198 HOH HOH . I 5 HOH B 46 200 200 HOH HOH . I 5 HOH B 47 202 202 HOH HOH . I 5 HOH B 48 226 226 HOH HOH . I 5 HOH B 49 227 227 HOH HOH . I 5 HOH B 50 228 228 HOH HOH . I 5 HOH B 51 229 229 HOH HOH . I 5 HOH B 52 230 230 HOH HOH . I 5 HOH B 53 231 231 HOH HOH . I 5 HOH B 54 232 232 HOH HOH . I 5 HOH B 55 244 244 HOH HOH . I 5 HOH B 56 245 245 HOH HOH . I 5 HOH B 57 249 249 HOH HOH . I 5 HOH B 58 255 255 HOH HOH . I 5 HOH B 59 260 260 HOH HOH . I 5 HOH B 60 261 261 HOH HOH . I 5 HOH B 61 262 262 HOH HOH . I 5 HOH B 62 263 263 HOH HOH . I 5 HOH B 63 267 267 HOH HOH . J 5 HOH C 1 155 155 HOH HOH . J 5 HOH C 2 156 156 HOH HOH . J 5 HOH C 3 157 157 HOH HOH . J 5 HOH C 4 158 158 HOH HOH . J 5 HOH C 5 159 159 HOH HOH . J 5 HOH C 6 160 160 HOH HOH . J 5 HOH C 7 161 161 HOH HOH . J 5 HOH C 8 162 162 HOH HOH . J 5 HOH C 9 163 163 HOH HOH . J 5 HOH C 10 164 164 HOH HOH . J 5 HOH C 11 165 165 HOH HOH . J 5 HOH C 12 166 166 HOH HOH . J 5 HOH C 13 167 167 HOH HOH . J 5 HOH C 14 168 168 HOH HOH . J 5 HOH C 15 169 169 HOH HOH . J 5 HOH C 16 170 170 HOH HOH . J 5 HOH C 17 171 171 HOH HOH . J 5 HOH C 18 172 172 HOH HOH . J 5 HOH C 19 173 173 HOH HOH . J 5 HOH C 20 174 174 HOH HOH . J 5 HOH C 21 175 175 HOH HOH . J 5 HOH C 22 176 176 HOH HOH . J 5 HOH C 23 177 177 HOH HOH . J 5 HOH C 24 178 178 HOH HOH . J 5 HOH C 25 179 179 HOH HOH . J 5 HOH C 26 180 180 HOH HOH . J 5 HOH C 27 181 181 HOH HOH . J 5 HOH C 28 182 182 HOH HOH . J 5 HOH C 29 183 183 HOH HOH . J 5 HOH C 30 184 184 HOH HOH . J 5 HOH C 31 185 185 HOH HOH . J 5 HOH C 32 186 186 HOH HOH . J 5 HOH C 33 187 187 HOH HOH . J 5 HOH C 34 188 188 HOH HOH . J 5 HOH C 35 189 189 HOH HOH . J 5 HOH C 36 190 190 HOH HOH . J 5 HOH C 37 191 191 HOH HOH . J 5 HOH C 38 192 192 HOH HOH . J 5 HOH C 39 193 193 HOH HOH . J 5 HOH C 40 194 194 HOH HOH . J 5 HOH C 41 195 195 HOH HOH . J 5 HOH C 42 196 196 HOH HOH . J 5 HOH C 43 197 197 HOH HOH . J 5 HOH C 44 198 198 HOH HOH . J 5 HOH C 45 199 199 HOH HOH . J 5 HOH C 46 207 207 HOH HOH . J 5 HOH C 47 209 209 HOH HOH . J 5 HOH C 48 213 213 HOH HOH . J 5 HOH C 49 217 217 HOH HOH . J 5 HOH C 50 218 218 HOH HOH . J 5 HOH C 51 220 220 HOH HOH . J 5 HOH C 52 221 221 HOH HOH . J 5 HOH C 53 233 233 HOH HOH . J 5 HOH C 54 235 235 HOH HOH . J 5 HOH C 55 236 236 HOH HOH . J 5 HOH C 56 243 243 HOH HOH . J 5 HOH C 57 250 250 HOH HOH . J 5 HOH C 58 251 251 HOH HOH . J 5 HOH C 59 252 252 HOH HOH . J 5 HOH C 60 253 253 HOH HOH . J 5 HOH C 61 256 256 HOH HOH . J 5 HOH C 62 271 271 HOH HOH . J 5 HOH C 63 273 273 HOH HOH . J 5 HOH C 64 275 275 HOH HOH . K 5 HOH D 1 155 155 HOH HOH . K 5 HOH D 2 156 156 HOH HOH . K 5 HOH D 3 157 157 HOH HOH . K 5 HOH D 4 158 158 HOH HOH . K 5 HOH D 5 159 159 HOH HOH . K 5 HOH D 6 160 160 HOH HOH . K 5 HOH D 7 161 161 HOH HOH . K 5 HOH D 8 162 162 HOH HOH . K 5 HOH D 9 163 163 HOH HOH . K 5 HOH D 10 164 164 HOH HOH . K 5 HOH D 11 165 165 HOH HOH . K 5 HOH D 12 166 166 HOH HOH . K 5 HOH D 13 167 167 HOH HOH . K 5 HOH D 14 168 168 HOH HOH . K 5 HOH D 15 169 169 HOH HOH . K 5 HOH D 16 170 170 HOH HOH . K 5 HOH D 17 171 171 HOH HOH . K 5 HOH D 18 172 172 HOH HOH . K 5 HOH D 19 173 173 HOH HOH . K 5 HOH D 20 174 174 HOH HOH . K 5 HOH D 21 175 175 HOH HOH . K 5 HOH D 22 176 176 HOH HOH . K 5 HOH D 23 177 177 HOH HOH . K 5 HOH D 24 178 178 HOH HOH . K 5 HOH D 25 179 179 HOH HOH . K 5 HOH D 26 180 180 HOH HOH . K 5 HOH D 27 181 181 HOH HOH . K 5 HOH D 28 182 182 HOH HOH . K 5 HOH D 29 183 183 HOH HOH . K 5 HOH D 30 184 184 HOH HOH . K 5 HOH D 31 185 185 HOH HOH . K 5 HOH D 32 186 186 HOH HOH . K 5 HOH D 33 187 187 HOH HOH . K 5 HOH D 34 188 188 HOH HOH . K 5 HOH D 35 189 189 HOH HOH . K 5 HOH D 36 190 190 HOH HOH . K 5 HOH D 37 191 191 HOH HOH . K 5 HOH D 38 193 193 HOH HOH . K 5 HOH D 39 197 197 HOH HOH . K 5 HOH D 40 208 208 HOH HOH . K 5 HOH D 41 211 211 HOH HOH . K 5 HOH D 42 215 215 HOH HOH . K 5 HOH D 43 216 216 HOH HOH . K 5 HOH D 44 239 239 HOH HOH . K 5 HOH D 45 241 241 HOH HOH . K 5 HOH D 46 242 242 HOH HOH . K 5 HOH D 47 248 248 HOH HOH . K 5 HOH D 48 257 257 HOH HOH . K 5 HOH D 49 259 259 HOH HOH . K 5 HOH D 50 264 264 HOH HOH . K 5 HOH D 51 266 266 HOH HOH . K 5 HOH D 52 268 268 HOH HOH . K 5 HOH D 53 270 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CMS . . . E 3 7.983 16.073 -24.5 1 39.39 ? C1 CMS 1071 A 1 HETATM 2 C C2 CMS . . . E 3 10.018 17.462 -24.318 1 42.45 ? C2 CMS 1071 A 1 HETATM 3 C C3 CMS . . . E 3 9.14 16.961 -26.519 1 49.21 ? C3 CMS 1071 A 1 HETATM 4 C C4 CMS . . . E 3 8.023 17.235 -27.452 1 47.95 ? C4 CMS 1071 A 1 HETATM 5 N N1 CMS . . . E 3 8.293 15.571 -23.319 1 32.39 ? N1 CMS 1071 A 1 HETATM 6 N N3 CMS . . . E 3 8.929 16.965 -25.111 1 45.32 ? N3 CMS 1071 A 1 HETATM 7 O O1 CMS . . . E 3 8.095 16.843 -28.608 1 42.39 ? O1 CMS 1071 A 1 HETATM 8 O O2 CMS . . . E 3 7.077 18.155 -27.097 1 53.11 ? O2 CMS 1071 A 1 HETATM 9 O O3 CMS . . . E 3 6.813 16.027 -24.86 1 30.31 ? O3 CMS 1071 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #