data_3QBN # _model_server_result.job_id dh1cY-LfpXtaZXghaslI2Q _model_server_result.datetime_utc '2025-04-26 18:42:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qbn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3QBN # _exptl.entry_id 3QBN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 334.801 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-chloro-N~4~-cyclopropyl-N~2~-[4-(2-methoxyethoxy)phenyl]pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QBN _cell.length_a 84.2 _cell.length_b 84.2 _cell.length_c 169.33 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QBN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H19 Cl N4 O2' _chem_comp.formula_weight 334.801 _chem_comp.id E9Z _chem_comp.mon_nstd_flag . _chem_comp.name 5-chloro-N~4~-cyclopropyl-N~2~-[4-(2-methoxyethoxy)phenyl]pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 N1 E9Z doub 83 n y N1 C2 E9Z sing 84 n y C2 NAN E9Z sing 85 n n C2 N3 E9Z doub 86 n y C4 N3 E9Z sing 87 n y C5 C4 E9Z doub 88 n y C4 NAO E9Z sing 89 n n CL5 C5 E9Z sing 90 n n C6 C5 E9Z sing 91 n y C6 H6 E9Z sing 92 n n OAP CAA E9Z sing 93 n n CAA HAA E9Z sing 94 n n CAA HAAA E9Z sing 95 n n CAA HAAB E9Z sing 96 n n CAS CAC E9Z doub 97 n y CAC CAE E9Z sing 98 n y CAC HAC E9Z sing 99 n n CAS CAD E9Z sing 100 n y CAD CAF E9Z doub 101 n y CAD HAD E9Z sing 102 n n CAE CAT E9Z doub 103 n y CAE HAE E9Z sing 104 n n CAF CAT E9Z sing 105 n y CAF HAF E9Z sing 106 n n CAI CAH E9Z sing 107 n n CAH OAP E9Z sing 108 n n CAH HAH E9Z sing 109 n n CAH HAHA E9Z sing 110 n n OAQ CAI E9Z sing 111 n n CAI HAI E9Z sing 112 n n CAI HAIA E9Z sing 113 n n CAW CAJ E9Z sing 114 n n CAK CAJ E9Z sing 115 n n CAJ HAJ E9Z sing 116 n n CAJ HAJA E9Z sing 117 n n CAW CAK E9Z sing 118 n n CAK HAK E9Z sing 119 n n CAK HAKA E9Z sing 120 n n NAN CAS E9Z sing 121 n n NAN HNAN E9Z sing 122 n n NAO CAW E9Z sing 123 n n NAO HNAO E9Z sing 124 n n CAT OAQ E9Z sing 125 n n CAW HAW E9Z sing 126 n n # _atom_sites.entry_id 3QBN _atom_sites.fract_transf_matrix[1][1] 0.011876 _atom_sites.fract_transf_matrix[1][2] 0.006857 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id E9Z _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id E9Z _pdbx_nonpoly_scheme.auth_mon_id E9Z _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 E9Z . . . B 2 -2.969 33.157 -7.605 1 111.01 ? N1 E9Z 1 A 1 HETATM 2 C C2 E9Z . . . B 2 -3.074 33.242 -6.269 1 113.04 ? C2 E9Z 1 A 1 HETATM 3 N N3 E9Z . . . B 2 -3.7 32.257 -5.619 1 112.66 ? N3 E9Z 1 A 1 HETATM 4 C C4 E9Z . . . B 2 -4.199 31.173 -6.234 1 111.51 ? C4 E9Z 1 A 1 HETATM 5 C C5 E9Z . . . B 2 -4.065 31.086 -7.621 1 110.75 ? C5 E9Z 1 A 1 HETATM 6 C C6 E9Z . . . B 2 -3.435 32.126 -8.277 1 110.27 ? C6 E9Z 1 A 1 HETATM 7 C CAA E9Z . . . B 2 -0.066 37.972 3.47 1 130.27 ? CAA E9Z 1 A 1 HETATM 8 C CAC E9Z . . . B 2 -2.392 33.719 -3.256 1 119.46 ? CAC E9Z 1 A 1 HETATM 9 C CAD E9Z . . . B 2 -1.175 35.566 -4.197 1 120.19 ? CAD E9Z 1 A 1 HETATM 10 C CAE E9Z . . . B 2 -1.824 33.985 -2 1 121.34 ? CAE E9Z 1 A 1 HETATM 11 C CAF E9Z . . . B 2 -0.611 35.838 -2.945 1 122.2 ? CAF E9Z 1 A 1 HETATM 12 C CAH E9Z . . . B 2 0.252 36.789 1.329 1 129.63 ? CAH E9Z 1 A 1 HETATM 13 C CAI E9Z . . . B 2 -0.603 36.634 0.021 1 127.59 ? CAI E9Z 1 A 1 HETATM 14 C CAJ E9Z . . . B 2 -4.853 29.89 -2.903 1 110.87 ? CAJ E9Z 1 A 1 HETATM 15 C CAK E9Z . . . B 2 -6.238 29.475 -3.462 1 110.08 ? CAK E9Z 1 A 1 HETATM 16 N NAN E9Z . . . B 2 -2.585 34.333 -5.625 1 116.2 ? NAN E9Z 1 A 1 HETATM 17 N NAO E9Z . . . B 2 -4.803 30.228 -5.475 1 111.48 ? NAO E9Z 1 A 1 HETATM 18 O OAP E9Z . . . B 2 -0.519 36.89 2.59 1 130.58 ? OAP E9Z 1 A 1 HETATM 19 O OAQ E9Z . . . B 2 -0.363 35.314 -0.598 1 125.85 ? OAQ E9Z 1 A 1 HETATM 20 C CAS E9Z . . . B 2 -2.07 34.503 -4.376 1 118.53 ? CAS E9Z 1 A 1 HETATM 21 C CAT E9Z . . . B 2 -0.935 35.058 -1.83 1 123.16 ? CAT E9Z 1 A 1 HETATM 22 C CAW E9Z . . . B 2 -5.457 30.597 -4.15 1 109.76 ? CAW E9Z 1 A 1 HETATM 23 CL CL5 E9Z . . . B 2 -4.662 29.749 -8.548 1 111.22 ? CL5 E9Z 1 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 500 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #