data_3QC6 # _model_server_result.job_id lB7bhdeaHn7cgCr1vKfNYw _model_server_result.datetime_utc '2024-11-09 23:23:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qc6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":606}' # _entry.id 3QC6 # _exptl.entry_id 3QC6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.013 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITROGEN MOLECULE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QC6 _cell.length_a 33.338 _cell.length_b 86.743 _cell.length_c 117.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QC6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B CA CA . X CA 1 1_555 A OD2 ASP 155 X ASP 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc2 B CA CA . X CA 1 1_555 A OD1 ASP 155 X ASP 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc3 B CA CA . X CA 1 1_555 A O GLU 157 X GLU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc4 B CA CA . X CA 1 1_555 A OD1 ASP 183 X ASP 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc5 B CA CA . X CA 1 1_555 A OD2 ASP 183 X ASP 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc6 B CA CA . X CA 1 1_555 A OD1 ASN 184 X ASN 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc7 B CA CA . X CA 1 1_555 A OD2 ASP 246 X ASP 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula N2 _chem_comp.formula_weight 28.013 _chem_comp.id HDZ _chem_comp.mon_nstd_flag . _chem_comp.name 'NITROGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 N6A _chem_comp_bond.atom_id_2 N6B _chem_comp_bond.comp_id HDZ _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 129 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 3QC6 _atom_sites.fract_transf_matrix[1][1] 0.029996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA X 1 1 1 CA CA . C 3 GOL X 1 605 605 GOL GOL . D 4 HDZ X 1 606 606 HDZ HDZ . E 4 HDZ X 1 607 607 HDZ HDZ . F 3 GOL X 1 609 609 GOL GOL . G 5 HOH X 1 3 3 HOH HOH . G 5 HOH X 2 4 4 HOH HOH . G 5 HOH X 3 5 5 HOH HOH . G 5 HOH X 4 6 6 HOH HOH . G 5 HOH X 5 7 7 HOH HOH . G 5 HOH X 6 8 8 HOH HOH . G 5 HOH X 7 9 9 HOH HOH . G 5 HOH X 8 10 10 HOH HOH . G 5 HOH X 9 11 11 HOH HOH . G 5 HOH X 10 12 12 HOH HOH . G 5 HOH X 11 13 13 HOH HOH . G 5 HOH X 12 14 14 HOH HOH . G 5 HOH X 13 15 15 HOH HOH . G 5 HOH X 14 16 16 HOH HOH . G 5 HOH X 15 17 17 HOH HOH . G 5 HOH X 16 18 18 HOH HOH . G 5 HOH X 17 19 19 HOH HOH . G 5 HOH X 18 20 20 HOH HOH . G 5 HOH X 19 21 21 HOH HOH . G 5 HOH X 20 22 22 HOH HOH . G 5 HOH X 21 23 23 HOH HOH . G 5 HOH X 22 24 24 HOH HOH . G 5 HOH X 23 25 25 HOH HOH . G 5 HOH X 24 26 26 HOH HOH . G 5 HOH X 25 27 27 HOH HOH . G 5 HOH X 26 28 28 HOH HOH . G 5 HOH X 27 29 29 HOH HOH . G 5 HOH X 28 30 30 HOH HOH . G 5 HOH X 29 31 31 HOH HOH . G 5 HOH X 30 32 32 HOH HOH . G 5 HOH X 31 33 33 HOH HOH . G 5 HOH X 32 34 34 HOH HOH . G 5 HOH X 33 35 35 HOH HOH . G 5 HOH X 34 36 36 HOH HOH . G 5 HOH X 35 37 37 HOH HOH . G 5 HOH X 36 38 38 HOH HOH . G 5 HOH X 37 39 39 HOH HOH . G 5 HOH X 38 40 40 HOH HOH . G 5 HOH X 39 41 41 HOH HOH . G 5 HOH X 40 42 42 HOH HOH . G 5 HOH X 41 43 43 HOH HOH . G 5 HOH X 42 44 44 HOH HOH . G 5 HOH X 43 45 45 HOH HOH . G 5 HOH X 44 46 46 HOH HOH . G 5 HOH X 45 47 47 HOH HOH . G 5 HOH X 46 48 48 HOH HOH . G 5 HOH X 47 49 49 HOH HOH . G 5 HOH X 48 50 50 HOH HOH . G 5 HOH X 49 51 51 HOH HOH . G 5 HOH X 50 52 52 HOH HOH . G 5 HOH X 51 53 53 HOH HOH . G 5 HOH X 52 54 54 HOH HOH . G 5 HOH X 53 55 55 HOH HOH . G 5 HOH X 54 56 56 HOH HOH . G 5 HOH X 55 57 57 HOH HOH . G 5 HOH X 56 58 58 HOH HOH . G 5 HOH X 57 59 59 HOH HOH . G 5 HOH X 58 60 60 HOH HOH . G 5 HOH X 59 61 61 HOH HOH . G 5 HOH X 60 62 62 HOH HOH . G 5 HOH X 61 63 63 HOH HOH . G 5 HOH X 62 64 64 HOH HOH . G 5 HOH X 63 65 65 HOH HOH . G 5 HOH X 64 66 66 HOH HOH . G 5 HOH X 65 67 67 HOH HOH . G 5 HOH X 66 68 68 HOH HOH . G 5 HOH X 67 69 69 HOH HOH . G 5 HOH X 68 70 70 HOH HOH . G 5 HOH X 69 71 71 HOH HOH . G 5 HOH X 70 72 72 HOH HOH . G 5 HOH X 71 73 73 HOH HOH . G 5 HOH X 72 74 74 HOH HOH . G 5 HOH X 73 75 75 HOH HOH . G 5 HOH X 74 76 76 HOH HOH . G 5 HOH X 75 77 77 HOH HOH . G 5 HOH X 76 78 78 HOH HOH . G 5 HOH X 77 79 79 HOH HOH . G 5 HOH X 78 80 80 HOH HOH . G 5 HOH X 79 81 81 HOH HOH . G 5 HOH X 80 82 82 HOH HOH . G 5 HOH X 81 83 83 HOH HOH . G 5 HOH X 82 84 84 HOH HOH . G 5 HOH X 83 85 85 HOH HOH . G 5 HOH X 84 86 86 HOH HOH . G 5 HOH X 85 87 87 HOH HOH . G 5 HOH X 86 88 88 HOH HOH . G 5 HOH X 87 89 89 HOH HOH . G 5 HOH X 88 90 90 HOH HOH . G 5 HOH X 89 91 91 HOH HOH . G 5 HOH X 90 92 92 HOH HOH . G 5 HOH X 91 93 93 HOH HOH . G 5 HOH X 92 94 94 HOH HOH . G 5 HOH X 93 95 95 HOH HOH . G 5 HOH X 94 96 96 HOH HOH . G 5 HOH X 95 97 97 HOH HOH . G 5 HOH X 96 98 98 HOH HOH . G 5 HOH X 97 99 99 HOH HOH . G 5 HOH X 98 100 100 HOH HOH . G 5 HOH X 99 101 101 HOH HOH . G 5 HOH X 100 102 102 HOH HOH . G 5 HOH X 101 103 103 HOH HOH . G 5 HOH X 102 104 104 HOH HOH . G 5 HOH X 103 105 105 HOH HOH . G 5 HOH X 104 106 106 HOH HOH . G 5 HOH X 105 107 107 HOH HOH . G 5 HOH X 106 108 108 HOH HOH . G 5 HOH X 107 109 109 HOH HOH . G 5 HOH X 108 110 110 HOH HOH . G 5 HOH X 109 111 111 HOH HOH . G 5 HOH X 110 112 112 HOH HOH . G 5 HOH X 111 113 113 HOH HOH . G 5 HOH X 112 114 114 HOH HOH . G 5 HOH X 113 115 115 HOH HOH . G 5 HOH X 114 116 116 HOH HOH . G 5 HOH X 115 117 117 HOH HOH . G 5 HOH X 116 118 118 HOH HOH . G 5 HOH X 117 119 119 HOH HOH . G 5 HOH X 118 120 120 HOH HOH . G 5 HOH X 119 121 121 HOH HOH . G 5 HOH X 120 122 122 HOH HOH . G 5 HOH X 121 123 123 HOH HOH . G 5 HOH X 122 124 124 HOH HOH . G 5 HOH X 123 125 125 HOH HOH . G 5 HOH X 124 126 126 HOH HOH . G 5 HOH X 125 127 127 HOH HOH . G 5 HOH X 126 128 128 HOH HOH . G 5 HOH X 127 129 129 HOH HOH . G 5 HOH X 128 130 130 HOH HOH . G 5 HOH X 129 131 131 HOH HOH . G 5 HOH X 130 132 132 HOH HOH . G 5 HOH X 131 133 133 HOH HOH . G 5 HOH X 132 134 134 HOH HOH . G 5 HOH X 133 135 135 HOH HOH . G 5 HOH X 134 136 136 HOH HOH . G 5 HOH X 135 137 137 HOH HOH . G 5 HOH X 136 138 138 HOH HOH . G 5 HOH X 137 139 139 HOH HOH . G 5 HOH X 138 140 140 HOH HOH . G 5 HOH X 139 141 141 HOH HOH . G 5 HOH X 140 142 142 HOH HOH . G 5 HOH X 141 143 143 HOH HOH . G 5 HOH X 142 144 144 HOH HOH . G 5 HOH X 143 145 145 HOH HOH . G 5 HOH X 144 146 146 HOH HOH . G 5 HOH X 145 147 147 HOH HOH . G 5 HOH X 146 148 148 HOH HOH . G 5 HOH X 147 149 149 HOH HOH . G 5 HOH X 148 150 150 HOH HOH . G 5 HOH X 149 151 151 HOH HOH . G 5 HOH X 150 152 152 HOH HOH . G 5 HOH X 151 153 153 HOH HOH . G 5 HOH X 152 154 154 HOH HOH . G 5 HOH X 153 155 155 HOH HOH . G 5 HOH X 154 156 156 HOH HOH . G 5 HOH X 155 157 157 HOH HOH . G 5 HOH X 156 158 158 HOH HOH . G 5 HOH X 157 159 159 HOH HOH . G 5 HOH X 158 160 160 HOH HOH . G 5 HOH X 159 161 161 HOH HOH . G 5 HOH X 160 162 162 HOH HOH . G 5 HOH X 161 163 163 HOH HOH . G 5 HOH X 162 164 164 HOH HOH . G 5 HOH X 163 165 165 HOH HOH . G 5 HOH X 164 166 166 HOH HOH . G 5 HOH X 165 167 167 HOH HOH . G 5 HOH X 166 168 168 HOH HOH . G 5 HOH X 167 169 169 HOH HOH . G 5 HOH X 168 170 170 HOH HOH . G 5 HOH X 169 171 171 HOH HOH . G 5 HOH X 170 172 172 HOH HOH . G 5 HOH X 171 173 173 HOH HOH . G 5 HOH X 172 174 174 HOH HOH . G 5 HOH X 173 175 175 HOH HOH . G 5 HOH X 174 176 176 HOH HOH . G 5 HOH X 175 177 177 HOH HOH . G 5 HOH X 176 178 178 HOH HOH . G 5 HOH X 177 179 179 HOH HOH . G 5 HOH X 178 180 180 HOH HOH . G 5 HOH X 179 181 181 HOH HOH . G 5 HOH X 180 182 182 HOH HOH . G 5 HOH X 181 183 183 HOH HOH . G 5 HOH X 182 184 184 HOH HOH . G 5 HOH X 183 185 185 HOH HOH . G 5 HOH X 184 186 186 HOH HOH . G 5 HOH X 185 187 187 HOH HOH . G 5 HOH X 186 188 188 HOH HOH . G 5 HOH X 187 189 189 HOH HOH . G 5 HOH X 188 190 190 HOH HOH . G 5 HOH X 189 191 191 HOH HOH . G 5 HOH X 190 192 192 HOH HOH . G 5 HOH X 191 193 193 HOH HOH . G 5 HOH X 192 194 194 HOH HOH . G 5 HOH X 193 195 195 HOH HOH . G 5 HOH X 194 196 196 HOH HOH . G 5 HOH X 195 197 197 HOH HOH . G 5 HOH X 196 198 198 HOH HOH . G 5 HOH X 197 199 199 HOH HOH . G 5 HOH X 198 200 200 HOH HOH . G 5 HOH X 199 201 201 HOH HOH . G 5 HOH X 200 202 202 HOH HOH . G 5 HOH X 201 203 203 HOH HOH . G 5 HOH X 202 204 204 HOH HOH . G 5 HOH X 203 205 205 HOH HOH . G 5 HOH X 204 206 206 HOH HOH . G 5 HOH X 205 207 207 HOH HOH . G 5 HOH X 206 208 208 HOH HOH . G 5 HOH X 207 209 209 HOH HOH . G 5 HOH X 208 210 210 HOH HOH . G 5 HOH X 209 211 211 HOH HOH . G 5 HOH X 210 212 212 HOH HOH . G 5 HOH X 211 213 213 HOH HOH . G 5 HOH X 212 214 214 HOH HOH . G 5 HOH X 213 215 215 HOH HOH . G 5 HOH X 214 216 216 HOH HOH . G 5 HOH X 215 217 217 HOH HOH . G 5 HOH X 216 218 218 HOH HOH . G 5 HOH X 217 219 219 HOH HOH . G 5 HOH X 218 220 220 HOH HOH . G 5 HOH X 219 221 221 HOH HOH . G 5 HOH X 220 222 222 HOH HOH . G 5 HOH X 221 610 610 HOH HOH . G 5 HOH X 222 611 611 HOH HOH . G 5 HOH X 223 612 612 HOH HOH . G 5 HOH X 224 613 613 HOH HOH . G 5 HOH X 225 614 614 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N6A HDZ . . . D 4 -7.631 43.271 -25.566 1 35.13 ? N6A HDZ 606 X 1 HETATM 2 N N6B HDZ . . . D 4 -6.384 44.106 -23.876 1 21.15 ? N6B HDZ 606 X 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #