data_3QCD # _model_server_result.job_id j7gfc9tsi_EE09GRGe99yQ _model_server_result.datetime_utc '2024-11-22 22:39:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2052}' # _entry.id 3QCD # _exptl.entry_id 3QCD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QCD _cell.length_a 75.4 _cell.length_b 75.4 _cell.length_c 151 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 3QCD _atom_sites.fract_transf_matrix[1][1] 0.013263 _atom_sites.fract_transf_matrix[1][2] 0.007657 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VO4 A 1 2001 2001 VO4 VO4 . C 3 ACY A 1 2051 2051 ACY ACY . D 3 ACY A 1 2052 2052 ACY ACY . E 4 HOH A 1 2101 2101 HOH HOH . E 4 HOH A 2 2102 2102 HOH HOH . E 4 HOH A 3 2103 2103 HOH HOH . E 4 HOH A 4 2104 2104 HOH HOH . E 4 HOH A 5 2105 2105 HOH HOH . E 4 HOH A 6 2106 2106 HOH HOH . E 4 HOH A 7 2107 2107 HOH HOH . E 4 HOH A 8 2108 2108 HOH HOH . E 4 HOH A 9 2109 2109 HOH HOH . E 4 HOH A 10 2110 2110 HOH HOH . E 4 HOH A 11 2111 2111 HOH HOH . E 4 HOH A 12 2112 2112 HOH HOH . E 4 HOH A 13 2113 2113 HOH HOH . E 4 HOH A 14 2114 2114 HOH HOH . E 4 HOH A 15 2115 2115 HOH HOH . E 4 HOH A 16 2116 2116 HOH HOH . E 4 HOH A 17 2117 2117 HOH HOH . E 4 HOH A 18 2118 2118 HOH HOH . E 4 HOH A 19 2119 2119 HOH HOH . E 4 HOH A 20 2120 2120 HOH HOH . E 4 HOH A 21 2121 2121 HOH HOH . E 4 HOH A 22 2122 2122 HOH HOH . E 4 HOH A 23 2123 2123 HOH HOH . E 4 HOH A 24 2124 2124 HOH HOH . E 4 HOH A 25 2125 2125 HOH HOH . E 4 HOH A 26 2126 2126 HOH HOH . E 4 HOH A 27 2127 2127 HOH HOH . E 4 HOH A 28 2128 2128 HOH HOH . E 4 HOH A 29 2129 2129 HOH HOH . E 4 HOH A 30 2130 2130 HOH HOH . E 4 HOH A 31 2131 2131 HOH HOH . E 4 HOH A 32 2132 2132 HOH HOH . E 4 HOH A 33 2133 2133 HOH HOH . E 4 HOH A 34 2134 2134 HOH HOH . E 4 HOH A 35 2135 2135 HOH HOH . E 4 HOH A 36 2136 2136 HOH HOH . E 4 HOH A 37 2137 2137 HOH HOH . E 4 HOH A 38 2138 2138 HOH HOH . E 4 HOH A 39 2139 2139 HOH HOH . E 4 HOH A 40 2140 2140 HOH HOH . E 4 HOH A 41 2141 2141 HOH HOH . E 4 HOH A 42 2142 2142 HOH HOH . E 4 HOH A 43 2143 2143 HOH HOH . E 4 HOH A 44 2144 2144 HOH HOH . E 4 HOH A 45 2145 2145 HOH HOH . E 4 HOH A 46 2146 2146 HOH HOH . E 4 HOH A 47 2147 2147 HOH HOH . E 4 HOH A 48 2148 2148 HOH HOH . E 4 HOH A 49 2149 2149 HOH HOH . E 4 HOH A 50 2150 2150 HOH HOH . E 4 HOH A 51 2151 2151 HOH HOH . E 4 HOH A 52 2152 2152 HOH HOH . E 4 HOH A 53 2153 2153 HOH HOH . E 4 HOH A 54 2154 2154 HOH HOH . E 4 HOH A 55 2155 2155 HOH HOH . E 4 HOH A 56 2156 2156 HOH HOH . E 4 HOH A 57 2157 2157 HOH HOH . E 4 HOH A 58 2158 2158 HOH HOH . E 4 HOH A 59 2159 2159 HOH HOH . E 4 HOH A 60 2160 2160 HOH HOH . E 4 HOH A 61 2161 2161 HOH HOH . E 4 HOH A 62 2162 2162 HOH HOH . E 4 HOH A 63 2163 2163 HOH HOH . E 4 HOH A 64 2164 2164 HOH HOH . E 4 HOH A 65 2165 2165 HOH HOH . E 4 HOH A 66 2166 2166 HOH HOH . E 4 HOH A 67 2167 2167 HOH HOH . E 4 HOH A 68 2168 2168 HOH HOH . E 4 HOH A 69 2169 2169 HOH HOH . E 4 HOH A 70 2170 2170 HOH HOH . E 4 HOH A 71 2171 2171 HOH HOH . E 4 HOH A 72 2172 2172 HOH HOH . E 4 HOH A 73 2173 2173 HOH HOH . E 4 HOH A 74 2174 2174 HOH HOH . E 4 HOH A 75 2175 2175 HOH HOH . E 4 HOH A 76 2176 2176 HOH HOH . E 4 HOH A 77 2177 2177 HOH HOH . E 4 HOH A 78 2178 2178 HOH HOH . E 4 HOH A 79 2179 2179 HOH HOH . E 4 HOH A 80 2180 2180 HOH HOH . E 4 HOH A 81 2181 2181 HOH HOH . E 4 HOH A 82 2182 2182 HOH HOH . E 4 HOH A 83 2183 2183 HOH HOH . E 4 HOH A 84 2184 2184 HOH HOH . E 4 HOH A 85 2185 2185 HOH HOH . E 4 HOH A 86 2186 2186 HOH HOH . E 4 HOH A 87 2187 2187 HOH HOH . E 4 HOH A 88 2188 2188 HOH HOH . E 4 HOH A 89 2189 2189 HOH HOH . E 4 HOH A 90 2190 2190 HOH HOH . E 4 HOH A 91 2191 2191 HOH HOH . E 4 HOH A 92 2192 2192 HOH HOH . E 4 HOH A 93 2193 2193 HOH HOH . E 4 HOH A 94 2194 2194 HOH HOH . E 4 HOH A 95 2195 2195 HOH HOH . E 4 HOH A 96 2196 2196 HOH HOH . E 4 HOH A 97 2197 2197 HOH HOH . E 4 HOH A 98 2198 2198 HOH HOH . E 4 HOH A 99 2199 2199 HOH HOH . E 4 HOH A 100 2200 2200 HOH HOH . E 4 HOH A 101 2201 2201 HOH HOH . E 4 HOH A 102 2202 2202 HOH HOH . E 4 HOH A 103 2203 2203 HOH HOH . E 4 HOH A 104 2204 2204 HOH HOH . E 4 HOH A 105 2205 2205 HOH HOH . E 4 HOH A 106 2206 2206 HOH HOH . E 4 HOH A 107 2207 2207 HOH HOH . E 4 HOH A 108 2208 2208 HOH HOH . E 4 HOH A 109 2209 2209 HOH HOH . E 4 HOH A 110 2210 2210 HOH HOH . E 4 HOH A 111 2211 2211 HOH HOH . E 4 HOH A 112 2212 2212 HOH HOH . E 4 HOH A 113 2213 2213 HOH HOH . E 4 HOH A 114 2214 2214 HOH HOH . E 4 HOH A 115 2215 2215 HOH HOH . E 4 HOH A 116 2216 2216 HOH HOH . E 4 HOH A 117 2217 2217 HOH HOH . E 4 HOH A 118 2218 2218 HOH HOH . E 4 HOH A 119 2219 2219 HOH HOH . E 4 HOH A 120 2220 2220 HOH HOH . E 4 HOH A 121 2221 2221 HOH HOH . E 4 HOH A 122 2222 2222 HOH HOH . E 4 HOH A 123 2223 2223 HOH HOH . E 4 HOH A 124 2224 2224 HOH HOH . E 4 HOH A 125 2225 2225 HOH HOH . E 4 HOH A 126 2226 2226 HOH HOH . E 4 HOH A 127 2227 2227 HOH HOH . E 4 HOH A 128 2228 2228 HOH HOH . E 4 HOH A 129 2229 2229 HOH HOH . E 4 HOH A 130 2230 2230 HOH HOH . E 4 HOH A 131 2231 2231 HOH HOH . E 4 HOH A 132 2232 2232 HOH HOH . E 4 HOH A 133 2233 2233 HOH HOH . E 4 HOH A 134 2234 2234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . D 3 33.44 23.595 64.46 1 44.24 ? C ACY 2052 A 1 HETATM 2 O O ACY . . . D 3 32.269 23.797 64.254 1 42.48 ? O ACY 2052 A 1 HETATM 3 O OXT ACY . . . D 3 33.92 22.458 64.398 1 42.42 ? OXT ACY 2052 A 1 HETATM 4 C CH3 ACY . . . D 3 34.36 24.759 64.814 1 43.55 ? CH3 ACY 2052 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #