data_3QCE # _model_server_result.job_id gktK-F-Qfxre-vGTZ-IiHQ _model_server_result.datetime_utc '2024-11-23 02:52:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2001}' # _entry.id 3QCE # _exptl.entry_id 3QCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 319.227 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QCE _cell.length_a 74.9 _cell.length_b 82.5 _cell.length_c 127 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C12 H8 Cl2 O2 S2' _chem_comp.formula_weight 319.227 _chem_comp.id NXY _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C1 NXY sing 237 n y C1 C2 NXY doub 238 n y C1 S3 NXY sing 239 n n S5 C2 NXY sing 240 n y C2 C6 NXY sing 241 n n C7 S3 NXY sing 242 n n C8 C4 NXY doub 243 n y C4 H4 NXY sing 244 n n C8 S5 NXY sing 245 n y C6 O9 NXY doub 246 n n C6 O10 NXY sing 247 n n C7 C11 NXY sing 248 n n C7 H7 NXY sing 249 n n C7 H7A NXY sing 250 n n C8 H8 NXY sing 251 n n O10 HO10 NXY sing 252 n n C11 C12 NXY doub 253 n y C11 C13 NXY sing 254 n y C12 C14 NXY sing 255 n y C12 H12 NXY sing 256 n n C13 C15 NXY doub 257 n y C13 H13 NXY sing 258 n n CL17 C14 NXY sing 259 n n C14 C16 NXY doub 260 n y C15 C16 NXY sing 261 n y C15 H15 NXY sing 262 n n C16 CL18 NXY sing 263 n n # _atom_sites.entry_id 3QCE _atom_sites.fract_transf_matrix[1][1] 0.013351 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NXY A 1 2001 2001 NXY NXY . D 3 SO4 A 1 2054 2054 SO4 SO4 . E 2 NXY B 1 2001 2001 NXY NXY . F 3 SO4 B 1 2051 2051 SO4 SO4 . G 3 SO4 B 1 2052 2052 SO4 SO4 . H 3 SO4 B 1 2053 2053 SO4 SO4 . I 4 HOH A 1 2101 2101 HOH HOH . I 4 HOH A 2 2102 2102 HOH HOH . I 4 HOH A 3 2103 2103 HOH HOH . I 4 HOH A 4 2104 2104 HOH HOH . I 4 HOH A 5 2105 2105 HOH HOH . I 4 HOH A 6 2106 2106 HOH HOH . I 4 HOH A 7 2107 2107 HOH HOH . I 4 HOH A 8 2108 2108 HOH HOH . I 4 HOH A 9 2109 2109 HOH HOH . I 4 HOH A 10 2110 2110 HOH HOH . I 4 HOH A 11 2111 2111 HOH HOH . I 4 HOH A 12 2112 2112 HOH HOH . I 4 HOH A 13 2113 2113 HOH HOH . I 4 HOH A 14 2114 2114 HOH HOH . I 4 HOH A 15 2115 2115 HOH HOH . I 4 HOH A 16 2116 2116 HOH HOH . I 4 HOH A 17 2117 2117 HOH HOH . I 4 HOH A 18 2118 2118 HOH HOH . I 4 HOH A 19 2119 2119 HOH HOH . I 4 HOH A 20 2120 2120 HOH HOH . I 4 HOH A 21 2121 2121 HOH HOH . I 4 HOH A 22 2122 2122 HOH HOH . I 4 HOH A 23 2123 2123 HOH HOH . I 4 HOH A 24 2124 2124 HOH HOH . I 4 HOH A 25 2125 2125 HOH HOH . I 4 HOH A 26 2126 2126 HOH HOH . I 4 HOH A 27 2127 2127 HOH HOH . I 4 HOH A 28 2128 2128 HOH HOH . I 4 HOH A 29 2129 2129 HOH HOH . I 4 HOH A 30 2130 2130 HOH HOH . I 4 HOH A 31 2131 2131 HOH HOH . I 4 HOH A 32 2132 2132 HOH HOH . I 4 HOH A 33 2133 2133 HOH HOH . I 4 HOH A 34 2134 2134 HOH HOH . I 4 HOH A 35 2135 2135 HOH HOH . I 4 HOH A 36 2136 2136 HOH HOH . I 4 HOH A 37 2137 2137 HOH HOH . I 4 HOH A 38 2138 2138 HOH HOH . I 4 HOH A 39 2139 2139 HOH HOH . I 4 HOH A 40 2140 2140 HOH HOH . I 4 HOH A 41 2141 2141 HOH HOH . I 4 HOH A 42 2142 2142 HOH HOH . I 4 HOH A 43 2143 2143 HOH HOH . I 4 HOH A 44 2144 2144 HOH HOH . I 4 HOH A 45 2145 2145 HOH HOH . I 4 HOH A 46 2146 2146 HOH HOH . I 4 HOH A 47 2147 2147 HOH HOH . I 4 HOH A 48 2148 2148 HOH HOH . I 4 HOH A 49 2149 2149 HOH HOH . I 4 HOH A 50 2150 2150 HOH HOH . I 4 HOH A 51 2151 2151 HOH HOH . I 4 HOH A 52 2152 2152 HOH HOH . I 4 HOH A 53 2153 2153 HOH HOH . I 4 HOH A 54 2154 2154 HOH HOH . I 4 HOH A 55 2155 2155 HOH HOH . I 4 HOH A 56 2156 2156 HOH HOH . I 4 HOH A 57 2157 2157 HOH HOH . I 4 HOH A 58 2158 2158 HOH HOH . I 4 HOH A 59 2159 2159 HOH HOH . I 4 HOH A 60 2160 2160 HOH HOH . I 4 HOH A 61 2161 2161 HOH HOH . I 4 HOH A 62 2162 2162 HOH HOH . I 4 HOH A 63 2163 2163 HOH HOH . I 4 HOH A 64 2164 2164 HOH HOH . I 4 HOH A 65 2165 2165 HOH HOH . I 4 HOH A 66 2166 2166 HOH HOH . I 4 HOH A 67 2167 2167 HOH HOH . I 4 HOH A 68 2168 2168 HOH HOH . I 4 HOH A 69 2169 2169 HOH HOH . I 4 HOH A 70 2170 2170 HOH HOH . I 4 HOH A 71 2171 2171 HOH HOH . I 4 HOH A 72 2172 2172 HOH HOH . I 4 HOH A 73 2173 2173 HOH HOH . I 4 HOH A 74 2174 2174 HOH HOH . I 4 HOH A 75 2175 2175 HOH HOH . I 4 HOH A 76 2176 2176 HOH HOH . I 4 HOH A 77 2177 2177 HOH HOH . I 4 HOH A 78 2178 2178 HOH HOH . I 4 HOH A 79 2179 2179 HOH HOH . I 4 HOH A 80 2180 2180 HOH HOH . I 4 HOH A 81 2181 2181 HOH HOH . I 4 HOH A 82 2182 2182 HOH HOH . I 4 HOH A 83 2183 2183 HOH HOH . I 4 HOH A 84 2184 2184 HOH HOH . I 4 HOH A 85 2185 2185 HOH HOH . I 4 HOH A 86 2186 2186 HOH HOH . J 4 HOH B 1 2101 2101 HOH HOH . J 4 HOH B 2 2102 2102 HOH HOH . J 4 HOH B 3 2103 2103 HOH HOH . J 4 HOH B 4 2105 2105 HOH HOH . J 4 HOH B 5 2106 2106 HOH HOH . J 4 HOH B 6 2107 2107 HOH HOH . J 4 HOH B 7 2108 2108 HOH HOH . J 4 HOH B 8 2109 2109 HOH HOH . J 4 HOH B 9 2110 2110 HOH HOH . J 4 HOH B 10 2111 2111 HOH HOH . J 4 HOH B 11 2112 2112 HOH HOH . J 4 HOH B 12 2113 2113 HOH HOH . J 4 HOH B 13 2114 2114 HOH HOH . J 4 HOH B 14 2115 2115 HOH HOH . J 4 HOH B 15 2116 2116 HOH HOH . J 4 HOH B 16 2117 2117 HOH HOH . J 4 HOH B 17 2118 2118 HOH HOH . J 4 HOH B 18 2119 2119 HOH HOH . J 4 HOH B 19 2120 2120 HOH HOH . J 4 HOH B 20 2121 2121 HOH HOH . J 4 HOH B 21 2122 2122 HOH HOH . J 4 HOH B 22 2123 2123 HOH HOH . J 4 HOH B 23 2124 2124 HOH HOH . J 4 HOH B 24 2125 2125 HOH HOH . J 4 HOH B 25 2126 2126 HOH HOH . J 4 HOH B 26 2127 2127 HOH HOH . J 4 HOH B 27 2128 2128 HOH HOH . J 4 HOH B 28 2129 2129 HOH HOH . J 4 HOH B 29 2130 2130 HOH HOH . J 4 HOH B 30 2131 2131 HOH HOH . J 4 HOH B 31 2132 2132 HOH HOH . J 4 HOH B 32 2133 2133 HOH HOH . J 4 HOH B 33 2134 2134 HOH HOH . J 4 HOH B 34 2135 2135 HOH HOH . J 4 HOH B 35 2136 2136 HOH HOH . J 4 HOH B 36 2137 2137 HOH HOH . J 4 HOH B 37 2138 2138 HOH HOH . J 4 HOH B 38 2139 2139 HOH HOH . J 4 HOH B 39 2140 2140 HOH HOH . J 4 HOH B 40 2141 2141 HOH HOH . J 4 HOH B 41 2142 2142 HOH HOH . J 4 HOH B 42 2143 2143 HOH HOH . J 4 HOH B 43 2144 2144 HOH HOH . J 4 HOH B 44 2145 2145 HOH HOH . J 4 HOH B 45 2146 2146 HOH HOH . J 4 HOH B 46 2147 2147 HOH HOH . J 4 HOH B 47 2148 2148 HOH HOH . J 4 HOH B 48 2149 2149 HOH HOH . J 4 HOH B 49 2150 2150 HOH HOH . J 4 HOH B 50 2151 2151 HOH HOH . J 4 HOH B 51 2152 2152 HOH HOH . J 4 HOH B 52 2153 2153 HOH HOH . J 4 HOH B 53 2154 2154 HOH HOH . J 4 HOH B 54 2155 2155 HOH HOH . J 4 HOH B 55 2156 2156 HOH HOH . J 4 HOH B 56 2157 2157 HOH HOH . J 4 HOH B 57 2158 2158 HOH HOH . J 4 HOH B 58 2159 2159 HOH HOH . J 4 HOH B 59 2160 2160 HOH HOH . J 4 HOH B 60 2161 2161 HOH HOH . J 4 HOH B 61 2162 2162 HOH HOH . J 4 HOH B 62 2163 2163 HOH HOH . J 4 HOH B 63 2164 2164 HOH HOH . J 4 HOH B 64 2165 2165 HOH HOH . J 4 HOH B 65 2166 2166 HOH HOH . J 4 HOH B 66 2167 2167 HOH HOH . J 4 HOH B 67 2168 2168 HOH HOH . J 4 HOH B 68 2169 2169 HOH HOH . J 4 HOH B 69 2170 2170 HOH HOH . J 4 HOH B 70 2171 2171 HOH HOH . J 4 HOH B 71 2172 2172 HOH HOH . J 4 HOH B 72 2173 2173 HOH HOH . J 4 HOH B 73 2174 2174 HOH HOH . J 4 HOH B 74 2175 2175 HOH HOH . J 4 HOH B 75 2176 2176 HOH HOH . J 4 HOH B 76 2177 2177 HOH HOH . J 4 HOH B 77 2178 2178 HOH HOH . J 4 HOH B 78 2179 2179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NXY . B . C 2 18.059 28.624 55.752 0.5 34.67 ? C1 NXY 2001 A 1 HETATM 2 C C2 NXY . B . C 2 18.104 29.98 56.258 0.5 32.82 ? C2 NXY 2001 A 1 HETATM 3 S S3 NXY . B . C 2 18.134 27.111 56.603 0.5 38.04 ? S3 NXY 2001 A 1 HETATM 4 C C4 NXY . B . C 2 17.942 28.93 54.476 0.5 34.48 ? C4 NXY 2001 A 1 HETATM 5 S S5 NXY . B . C 2 17.947 31.149 54.896 0.5 32.83 ? S5 NXY 2001 A 1 HETATM 6 C C6 NXY . B . C 2 18.262 30.297 57.673 0.5 30.78 ? C6 NXY 2001 A 1 HETATM 7 C C7 NXY . B . C 2 18.218 26.13 55.115 0.5 38.41 ? C7 NXY 2001 A 1 HETATM 8 C C8 NXY . B . C 2 17.87 29.936 53.629 0.5 32.82 ? C8 NXY 2001 A 1 HETATM 9 O O9 NXY . B . C 2 18.541 31.467 57.995 0.5 33.38 ? O9 NXY 2001 A 1 HETATM 10 O O10 NXY . B . C 2 18.132 29.385 58.509 0.5 28.37 ? O10 NXY 2001 A 1 HETATM 11 C C11 NXY . B . C 2 17.987 24.7 55.452 0.5 38.79 ? C11 NXY 2001 A 1 HETATM 12 C C12 NXY . B . C 2 16.628 24.262 55.522 0.5 39.05 ? C12 NXY 2001 A 1 HETATM 13 C C13 NXY . B . C 2 19.14 23.861 55.68 0.5 40.11 ? C13 NXY 2001 A 1 HETATM 14 C C14 NXY . B . C 2 16.462 22.895 55.845 0.5 39.23 ? C14 NXY 2001 A 1 HETATM 15 C C15 NXY . B . C 2 18.967 22.494 56.053 0.5 39.89 ? C15 NXY 2001 A 1 HETATM 16 C C16 NXY . B . C 2 17.605 22.059 56.127 0.5 39.1 ? C16 NXY 2001 A 1 HETATM 17 CL CL17 NXY . B . C 2 14.877 22.242 55.816 0.5 37.78 ? CL17 NXY 2001 A 1 HETATM 18 CL CL18 NXY . B . C 2 17.311 20.431 56.545 0.5 38.14 ? CL18 NXY 2001 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #