data_3QCF # _model_server_result.job_id kuht1eBHovgTvCxV8PBHaQ _model_server_result.datetime_utc '2025-07-03 14:48:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qcf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 3QCF # _exptl.entry_id 3QCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 319.227 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QCF _cell.length_a 74.9 _cell.length_b 82.3 _cell.length_c 126.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H8 Cl2 O2 S2' _chem_comp.formula_weight 319.227 _chem_comp.id NXY _chem_comp.mon_nstd_flag . _chem_comp.name '3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C1 NXY sing 237 n y C1 C2 NXY doub 238 n y C1 S3 NXY sing 239 n n S5 C2 NXY sing 240 n y C2 C6 NXY sing 241 n n C7 S3 NXY sing 242 n n C8 C4 NXY doub 243 n y C4 H4 NXY sing 244 n n C8 S5 NXY sing 245 n y C6 O9 NXY doub 246 n n C6 O10 NXY sing 247 n n C7 C11 NXY sing 248 n n C7 H7 NXY sing 249 n n C7 H7A NXY sing 250 n n C8 H8 NXY sing 251 n n O10 HO10 NXY sing 252 n n C11 C12 NXY doub 253 n y C11 C13 NXY sing 254 n y C12 C14 NXY sing 255 n y C12 H12 NXY sing 256 n n C13 C15 NXY doub 257 n y C13 H13 NXY sing 258 n n CL17 C14 NXY sing 259 n n C14 C16 NXY doub 260 n y C15 C16 NXY sing 261 n y C15 H15 NXY sing 262 n n C16 CL18 NXY sing 263 n n # _atom_sites.entry_id 3QCF _atom_sites.fract_transf_matrix[1][1] 0.013351 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012151 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NXY A 1 2001 2001 NXY NXY . D 2 NXY B 1 2001 2001 NXY NXY . E 3 SO4 B 1 2051 2051 SO4 SO4 . F 4 HOH A 1 2101 2101 HOH HOH . F 4 HOH A 2 2102 2102 HOH HOH . F 4 HOH A 3 2103 2103 HOH HOH . F 4 HOH A 4 2104 2104 HOH HOH . F 4 HOH A 5 2105 2105 HOH HOH . F 4 HOH A 6 2106 2106 HOH HOH . F 4 HOH A 7 2107 2107 HOH HOH . F 4 HOH A 8 2108 2108 HOH HOH . F 4 HOH A 9 2109 2109 HOH HOH . F 4 HOH A 10 2110 2110 HOH HOH . F 4 HOH A 11 2111 2111 HOH HOH . F 4 HOH A 12 2112 2112 HOH HOH . F 4 HOH A 13 2113 2113 HOH HOH . F 4 HOH A 14 2114 2114 HOH HOH . F 4 HOH A 15 2115 2115 HOH HOH . F 4 HOH A 16 2116 2116 HOH HOH . F 4 HOH A 17 2117 2117 HOH HOH . F 4 HOH A 18 2118 2118 HOH HOH . F 4 HOH A 19 2119 2119 HOH HOH . G 4 HOH B 1 2101 2101 HOH HOH . G 4 HOH B 2 2102 2102 HOH HOH . G 4 HOH B 3 2103 2103 HOH HOH . G 4 HOH B 4 2104 2104 HOH HOH . G 4 HOH B 5 2105 2105 HOH HOH . G 4 HOH B 6 2106 2106 HOH HOH . G 4 HOH B 7 2107 2107 HOH HOH . G 4 HOH B 8 2108 2108 HOH HOH . G 4 HOH B 9 2109 2109 HOH HOH . G 4 HOH B 10 2110 2110 HOH HOH . G 4 HOH B 11 2111 2111 HOH HOH . G 4 HOH B 12 2112 2112 HOH HOH . G 4 HOH B 13 2113 2113 HOH HOH . G 4 HOH B 14 2114 2114 HOH HOH . G 4 HOH B 15 2115 2115 HOH HOH . G 4 HOH B 16 2116 2116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NXY . . . D 2 34.007 54.718 78.758 1 44.69 ? C1 NXY 2001 B 1 HETATM 2 C C2 NXY . . . D 2 34.51 53.432 78.25 1 44.69 ? C2 NXY 2001 B 1 HETATM 3 S S3 NXY . . . D 2 33.478 56.093 77.845 1 47.09 ? S3 NXY 2001 B 1 HETATM 4 C C4 NXY . . . D 2 34.136 54.503 80.052 1 43.85 ? C4 NXY 2001 B 1 HETATM 5 S S5 NXY . . . D 2 34.907 52.32 79.658 1 41.55 ? S5 NXY 2001 B 1 HETATM 6 C C6 NXY . . . D 2 34.659 53.156 76.795 1 44.49 ? C6 NXY 2001 B 1 HETATM 7 C C7 NXY . . . D 2 32.723 57.081 79.136 1 41.58 ? C7 NXY 2001 B 1 HETATM 8 C C8 NXY . . . D 2 34.538 53.568 80.887 1 43.68 ? C8 NXY 2001 B 1 HETATM 9 O O9 NXY . . . D 2 34.877 51.993 76.393 1 46.86 ? O9 NXY 2001 B 1 HETATM 10 O O10 NXY . . . D 2 34.57 54.121 76.012 1 44.56 ? O10 NXY 2001 B 1 HETATM 11 C C11 NXY . . . D 2 31.891 58.152 78.467 1 39.25 ? C11 NXY 2001 B 1 HETATM 12 C C12 NXY . . . D 2 30.502 57.881 78.354 1 37.49 ? C12 NXY 2001 B 1 HETATM 13 C C13 NXY . . . D 2 32.514 59.386 78.026 1 38.97 ? C13 NXY 2001 B 1 HETATM 14 C C14 NXY . . . D 2 29.74 58.937 77.823 1 36.72 ? C14 NXY 2001 B 1 HETATM 15 C C15 NXY . . . D 2 31.753 60.439 77.457 1 36.46 ? C15 NXY 2001 B 1 HETATM 16 C C16 NXY . . . D 2 30.356 60.166 77.392 1 37.67 ? C16 NXY 2001 B 1 HETATM 17 CL CL17 NXY . . . D 2 28.049 58.776 77.835 1 34.36 ? CL17 NXY 2001 B 1 HETATM 18 CL CL18 NXY . . . D 2 29.324 61.428 76.82 1 39.31 ? CL18 NXY 2001 B 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #