data_3QCL # _model_server_result.job_id sg15VWy08q87OLsex7mEsg _model_server_result.datetime_utc '2025-07-31 22:11:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qcl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2001}' # _entry.id 3QCL # _exptl.entry_id 3QCL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.273 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(3,4-dichlorobenzyl)sulfanyl]-4-(4-hydroxybut-1-yn-1-yl)benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QCL _cell.length_a 75.5 _cell.length_b 75.5 _cell.length_c 151.8 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QCL _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H14 Cl2 O3 S' _chem_comp.formula_weight 381.273 _chem_comp.id NXV _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(3,4-dichlorobenzyl)sulfanyl]-4-(4-hydroxybut-1-yn-1-yl)benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 NXV doub 237 n y C1 C2 NXV sing 238 n y C1 C7 NXV sing 239 n n C3 C2 NXV doub 240 n y C2 H2 NXV sing 241 n n C4 C3 NXV sing 242 n y C3 H3 NXV sing 243 n n C20 C4 NXV sing 244 n n C5 C4 NXV doub 245 n y S10 C5 NXV sing 246 n n C5 C6 NXV sing 247 n y C6 H6 NXV sing 248 n n C7 C8 NXV trip 249 n n C8 C9 NXV sing 250 n n C9 C23 NXV sing 251 n n C9 H9 NXV sing 252 n n C9 H9A NXV sing 253 n n S10 C11 NXV sing 254 n n C12 C11 NXV sing 255 n n C11 H11 NXV sing 256 n n C11 H11A NXV sing 257 n n C13 C12 NXV doub 258 n y C17 C12 NXV sing 259 n y C14 C13 NXV sing 260 n y C13 H13 NXV sing 261 n n C15 C14 NXV doub 262 n y C14 H14 NXV sing 263 n n CL19 C15 NXV sing 264 n n C15 C16 NXV sing 265 n y CL18 C16 NXV sing 266 n n C16 C17 NXV doub 267 n y C17 H17 NXV sing 268 n n O21 C20 NXV doub 269 n n O22 C20 NXV sing 270 n n O22 HO22 NXV sing 271 n n C23 O24 NXV sing 272 n n C23 H23 NXV sing 273 n n C23 H23A NXV sing 274 n n O24 HO24 NXV sing 275 n n # _atom_sites.entry_id 3QCL _atom_sites.fract_transf_matrix[1][1] 0.013245 _atom_sites.fract_transf_matrix[1][2] 0.007647 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015294 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NXV A 1 2001 2001 NXV NXV . C 3 HOH A 1 2101 2101 HOH HOH . C 3 HOH A 2 2102 2102 HOH HOH . C 3 HOH A 3 2103 2103 HOH HOH . C 3 HOH A 4 2104 2104 HOH HOH . C 3 HOH A 5 2105 2105 HOH HOH . C 3 HOH A 6 2106 2106 HOH HOH . C 3 HOH A 7 2107 2107 HOH HOH . C 3 HOH A 8 2108 2108 HOH HOH . C 3 HOH A 9 2109 2109 HOH HOH . C 3 HOH A 10 2110 2110 HOH HOH . C 3 HOH A 11 2111 2111 HOH HOH . C 3 HOH A 12 2112 2112 HOH HOH . C 3 HOH A 13 2113 2113 HOH HOH . C 3 HOH A 14 2114 2114 HOH HOH . C 3 HOH A 15 2115 2115 HOH HOH . C 3 HOH A 16 2116 2116 HOH HOH . C 3 HOH A 17 2117 2117 HOH HOH . C 3 HOH A 18 2118 2118 HOH HOH . C 3 HOH A 19 2119 2119 HOH HOH . C 3 HOH A 20 2120 2120 HOH HOH . C 3 HOH A 21 2121 2121 HOH HOH . C 3 HOH A 22 2122 2122 HOH HOH . C 3 HOH A 23 2123 2123 HOH HOH . C 3 HOH A 24 2124 2124 HOH HOH . C 3 HOH A 25 2125 2125 HOH HOH . C 3 HOH A 26 2126 2126 HOH HOH . C 3 HOH A 27 2127 2127 HOH HOH . C 3 HOH A 28 2128 2128 HOH HOH . C 3 HOH A 29 2129 2129 HOH HOH . C 3 HOH A 30 2130 2130 HOH HOH . C 3 HOH A 31 2131 2131 HOH HOH . C 3 HOH A 32 2132 2132 HOH HOH . C 3 HOH A 33 2133 2133 HOH HOH . C 3 HOH A 34 2134 2134 HOH HOH . C 3 HOH A 35 2135 2135 HOH HOH . C 3 HOH A 36 2136 2136 HOH HOH . C 3 HOH A 37 2137 2137 HOH HOH . C 3 HOH A 38 2138 2138 HOH HOH . C 3 HOH A 39 2139 2139 HOH HOH . C 3 HOH A 40 2140 2140 HOH HOH . C 3 HOH A 41 2141 2141 HOH HOH . C 3 HOH A 42 2142 2142 HOH HOH . C 3 HOH A 43 2143 2143 HOH HOH . C 3 HOH A 44 2144 2144 HOH HOH . C 3 HOH A 45 2145 2145 HOH HOH . C 3 HOH A 46 2146 2146 HOH HOH . C 3 HOH A 47 2147 2147 HOH HOH . C 3 HOH A 48 2148 2148 HOH HOH . C 3 HOH A 49 2149 2149 HOH HOH . C 3 HOH A 50 2150 2150 HOH HOH . C 3 HOH A 51 2151 2151 HOH HOH . C 3 HOH A 52 2152 2152 HOH HOH . C 3 HOH A 53 2153 2153 HOH HOH . C 3 HOH A 54 2154 2154 HOH HOH . C 3 HOH A 55 2155 2155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NXV . . . B 2 19.336 29.961 64.27 1 58.24 ? C1 NXV 2001 A 1 HETATM 2 C C2 NXV . . . B 2 20.467 30.776 64.473 1 58.29 ? C2 NXV 2001 A 1 HETATM 3 C C3 NXV . . . B 2 21.271 31.238 63.402 1 57.6 ? C3 NXV 2001 A 1 HETATM 4 C C4 NXV . . . B 2 20.96 30.809 62.11 1 57.27 ? C4 NXV 2001 A 1 HETATM 5 C C5 NXV . . . B 2 19.833 29.967 61.906 1 55.83 ? C5 NXV 2001 A 1 HETATM 6 C C6 NXV . . . B 2 19.034 29.504 62.987 1 56.38 ? C6 NXV 2001 A 1 HETATM 7 C C7 NXV . . . B 2 18.563 29.516 65.387 1 57.97 ? C7 NXV 2001 A 1 HETATM 8 C C8 NXV . . . B 2 17.925 29.151 66.311 1 58 ? C8 NXV 2001 A 1 HETATM 9 C C9 NXV . . . B 2 17.19 28.685 67.477 1 56.17 ? C9 NXV 2001 A 1 HETATM 10 S S10 NXV . . . B 2 19.47 29.41 60.292 1 52.57 ? S10 NXV 2001 A 1 HETATM 11 C C11 NXV . . . B 2 17.808 28.84 60.377 1 54.19 ? C11 NXV 2001 A 1 HETATM 12 C C12 NXV . . . B 2 17.45 28.361 59.038 1 53.56 ? C12 NXV 2001 A 1 HETATM 13 C C13 NXV . . . B 2 16.823 29.236 58.163 1 51.54 ? C13 NXV 2001 A 1 HETATM 14 C C14 NXV . . . B 2 16.471 28.828 56.886 1 50.42 ? C14 NXV 2001 A 1 HETATM 15 C C15 NXV . . . B 2 16.707 27.517 56.526 1 51.72 ? C15 NXV 2001 A 1 HETATM 16 C C16 NXV . . . B 2 17.359 26.63 57.438 1 51.81 ? C16 NXV 2001 A 1 HETATM 17 C C17 NXV . . . B 2 17.734 27.038 58.712 1 53.01 ? C17 NXV 2001 A 1 HETATM 18 CL CL18 NXV . . . B 2 17.647 25.009 56.956 1 46.85 ? CL18 NXV 2001 A 1 HETATM 19 CL CL19 NXV . . . B 2 16.167 26.914 54.983 1 51.3 ? CL19 NXV 2001 A 1 HETATM 20 C C20 NXV . . . B 2 21.717 31.29 60.971 1 57.66 ? C20 NXV 2001 A 1 HETATM 21 O O21 NXV . . . B 2 21.139 32.083 60.253 1 58.71 ? O21 NXV 2001 A 1 HETATM 22 O O22 NXV . . . B 2 22.932 30.895 60.719 1 59.03 ? O22 NXV 2001 A 1 HETATM 23 C C23 NXV . . . B 2 18.155 28.324 68.562 1 54.7 ? C23 NXV 2001 A 1 HETATM 24 O O24 NXV . . . B 2 18.266 29.423 69.493 1 55.76 ? O24 NXV 2001 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #