data_3QCY # _model_server_result.job_id blKBQom_ayGc_fa_FefNcQ _model_server_result.datetime_utc '2024-11-07 07:34:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qcy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":365}' # _entry.id 3QCY # _exptl.entry_id 3QCY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QCY _cell.length_a 123.674 _cell.length_b 123.674 _cell.length_c 47.128 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QCY _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 187 n n C1 C2 GOL sing 188 n n C1 H11 GOL sing 189 n n C1 H12 GOL sing 190 n n O1 HO1 GOL sing 191 n n C2 O2 GOL sing 192 n n C2 C3 GOL sing 193 n n C2 H2 GOL sing 194 n n O2 HO2 GOL sing 195 n n C3 O3 GOL sing 196 n n C3 H31 GOL sing 197 n n C3 H32 GOL sing 198 n n O3 HO3 GOL sing 199 n n # _atom_sites.entry_id 3QCY _atom_sites.fract_transf_matrix[1][1] 0.008086 _atom_sites.fract_transf_matrix[1][2] 0.004668 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 360 360 GOL GOL . C 2 GOL A 1 361 361 GOL GOL . D 2 GOL A 1 363 363 GOL GOL . E 2 GOL A 1 365 365 GOL GOL . F 3 SO4 A 1 366 366 SO4 SO4 . G 3 SO4 A 1 368 368 SO4 SO4 . H 3 SO4 A 1 369 369 SO4 SO4 . I 3 SO4 A 1 1 1 SO4 SO4 . J 3 SO4 A 1 2 2 SO4 SO4 . K 3 SO4 A 1 3 3 SO4 SO4 . L 4 3Q3 A 1 371 371 3Q3 3Q3 . M 5 HOH A 1 5 5 HOH HOH . M 5 HOH A 2 6 6 HOH HOH . M 5 HOH A 3 7 7 HOH HOH . M 5 HOH A 4 10 10 HOH HOH . M 5 HOH A 5 17 17 HOH HOH . M 5 HOH A 6 18 18 HOH HOH . M 5 HOH A 7 19 19 HOH HOH . M 5 HOH A 8 27 27 HOH HOH . M 5 HOH A 9 30 30 HOH HOH . M 5 HOH A 10 33 33 HOH HOH . M 5 HOH A 11 34 34 HOH HOH . M 5 HOH A 12 35 35 HOH HOH . M 5 HOH A 13 36 36 HOH HOH . M 5 HOH A 14 40 40 HOH HOH . M 5 HOH A 15 41 41 HOH HOH . M 5 HOH A 16 43 43 HOH HOH . M 5 HOH A 17 44 44 HOH HOH . M 5 HOH A 18 45 45 HOH HOH . M 5 HOH A 19 46 46 HOH HOH . M 5 HOH A 20 47 47 HOH HOH . M 5 HOH A 21 362 362 HOH HOH . M 5 HOH A 22 364 364 HOH HOH . M 5 HOH A 23 367 367 HOH HOH . M 5 HOH A 24 370 370 HOH HOH . M 5 HOH A 25 372 372 HOH HOH . M 5 HOH A 26 373 373 HOH HOH . M 5 HOH A 27 374 374 HOH HOH . M 5 HOH A 28 375 375 HOH HOH . M 5 HOH A 29 376 376 HOH HOH . M 5 HOH A 30 377 377 HOH HOH . M 5 HOH A 31 378 378 HOH HOH . M 5 HOH A 32 379 379 HOH HOH . M 5 HOH A 33 380 380 HOH HOH . M 5 HOH A 34 381 381 HOH HOH . M 5 HOH A 35 382 382 HOH HOH . M 5 HOH A 36 383 383 HOH HOH . M 5 HOH A 37 384 384 HOH HOH . M 5 HOH A 38 385 385 HOH HOH . M 5 HOH A 39 386 386 HOH HOH . M 5 HOH A 40 387 387 HOH HOH . M 5 HOH A 41 388 388 HOH HOH . M 5 HOH A 42 389 389 HOH HOH . M 5 HOH A 43 390 390 HOH HOH . M 5 HOH A 44 391 391 HOH HOH . M 5 HOH A 45 392 392 HOH HOH . M 5 HOH A 46 393 393 HOH HOH . M 5 HOH A 47 394 394 HOH HOH . M 5 HOH A 48 395 395 HOH HOH . M 5 HOH A 49 396 396 HOH HOH . M 5 HOH A 50 397 397 HOH HOH . M 5 HOH A 51 398 398 HOH HOH . M 5 HOH A 52 399 399 HOH HOH . M 5 HOH A 53 400 400 HOH HOH . M 5 HOH A 54 401 401 HOH HOH . M 5 HOH A 55 402 402 HOH HOH . M 5 HOH A 56 403 403 HOH HOH . M 5 HOH A 57 404 404 HOH HOH . M 5 HOH A 58 405 405 HOH HOH . M 5 HOH A 59 406 406 HOH HOH . M 5 HOH A 60 407 407 HOH HOH . M 5 HOH A 61 408 408 HOH HOH . M 5 HOH A 62 409 409 HOH HOH . M 5 HOH A 63 410 410 HOH HOH . M 5 HOH A 64 411 411 HOH HOH . M 5 HOH A 65 412 412 HOH HOH . M 5 HOH A 66 413 413 HOH HOH . M 5 HOH A 67 414 414 HOH HOH . M 5 HOH A 68 415 415 HOH HOH . M 5 HOH A 69 416 416 HOH HOH . M 5 HOH A 70 417 417 HOH HOH . M 5 HOH A 71 418 418 HOH HOH . M 5 HOH A 72 419 419 HOH HOH . M 5 HOH A 73 420 420 HOH HOH . M 5 HOH A 74 421 421 HOH HOH . M 5 HOH A 75 422 422 HOH HOH . M 5 HOH A 76 423 423 HOH HOH . M 5 HOH A 77 424 424 HOH HOH . M 5 HOH A 78 425 425 HOH HOH . M 5 HOH A 79 426 426 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 -38.371 5.225 -5.27 1 27.74 ? C1 GOL 365 A 1 HETATM 2 O O1 GOL . . . E 2 -37.039 4.789 -5.077 1 29.61 ? O1 GOL 365 A 1 HETATM 3 C C2 GOL . . . E 2 -38.38 6.319 -6.334 1 38.15 ? C2 GOL 365 A 1 HETATM 4 O O2 GOL . . . E 2 -37.219 6.254 -7.127 1 39.99 ? O2 GOL 365 A 1 HETATM 5 C C3 GOL . . . E 2 -39.604 6.191 -7.224 1 34.64 ? C3 GOL 365 A 1 HETATM 6 O O3 GOL . . . E 2 -40.631 6.961 -6.646 1 43.59 ? O3 GOL 365 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 393 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #