data_3QCZ
#
_model_server_result.job_id            4Gb257PrgJ5hhuBllN2wVg 
_model_server_result.datetime_utc      '2025-02-21 04:38:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qcz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":435}' 
#
_entry.id    3QCZ 
#
_exptl.entry_id    3QCZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3QCZ 
_cell.length_a            62.861 
_cell.length_b            83.237 
_cell.length_c            126.99 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QCZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O SER 86 A SER 83 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc2 A OE2 GLU 149 A GLU 146 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc3 G O HOH . A HOH 436 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc4 G O HOH . A HOH 437 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc5 B O1G ANP . A ANP 501 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc6 B O1B ANP . A ANP 501 1_555 C MN MN . A MN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 179 n n 
C1 C2 GOL sing 180 n n 
C1 H11 GOL sing 181 n n 
C1 H12 GOL sing 182 n n 
O1 HO1 GOL sing 183 n n 
C2 O2 GOL sing 184 n n 
C2 C3 GOL sing 185 n n 
C2 H2 GOL sing 186 n n 
O2 HO2 GOL sing 187 n n 
C3 O3 GOL sing 188 n n 
C3 H31 GOL sing 189 n n 
C3 H32 GOL sing 190 n n 
O3 HO3 GOL sing 191 n n 
#
_atom_sites.entry_id                     3QCZ 
_atom_sites.fract_transf_matrix[1][1]    0.015908 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012014 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007875 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 501 501 ANP ANP . 
C 3 MN A 1 601 601 MN MN . 
D 4 GOL A 1 435 601 GOL GOL . 
E 4 GOL A 1 602 602 GOL GOL . 
F 5 GLU A 1 701 701 GLU GLU . 
G 6 HOH A 1 436 1 HOH HOH . 
G 6 HOH A 2 437 2 HOH HOH . 
G 6 HOH A 3 438 3 HOH HOH . 
G 6 HOH A 4 439 4 HOH HOH . 
G 6 HOH A 5 440 5 HOH HOH . 
G 6 HOH A 6 441 6 HOH HOH . 
G 6 HOH A 7 442 7 HOH HOH . 
G 6 HOH A 8 443 8 HOH HOH . 
G 6 HOH A 9 444 9 HOH HOH . 
G 6 HOH A 10 445 10 HOH HOH . 
G 6 HOH A 11 446 11 HOH HOH . 
G 6 HOH A 12 447 12 HOH HOH . 
G 6 HOH A 13 448 13 HOH HOH . 
G 6 HOH A 14 449 14 HOH HOH . 
G 6 HOH A 15 450 15 HOH HOH . 
G 6 HOH A 16 451 16 HOH HOH . 
G 6 HOH A 17 452 17 HOH HOH . 
G 6 HOH A 18 453 18 HOH HOH . 
G 6 HOH A 19 454 19 HOH HOH . 
G 6 HOH A 20 455 20 HOH HOH . 
G 6 HOH A 21 456 21 HOH HOH . 
G 6 HOH A 22 457 22 HOH HOH . 
G 6 HOH A 23 458 23 HOH HOH . 
G 6 HOH A 24 459 24 HOH HOH . 
G 6 HOH A 25 460 25 HOH HOH . 
G 6 HOH A 26 461 26 HOH HOH . 
G 6 HOH A 27 462 27 HOH HOH . 
G 6 HOH A 28 463 28 HOH HOH . 
G 6 HOH A 29 464 29 HOH HOH . 
G 6 HOH A 30 465 30 HOH HOH . 
G 6 HOH A 31 466 31 HOH HOH . 
G 6 HOH A 32 467 32 HOH HOH . 
G 6 HOH A 33 468 33 HOH HOH . 
G 6 HOH A 34 469 34 HOH HOH . 
G 6 HOH A 35 470 35 HOH HOH . 
G 6 HOH A 36 471 36 HOH HOH . 
G 6 HOH A 37 472 37 HOH HOH . 
G 6 HOH A 38 473 38 HOH HOH . 
G 6 HOH A 39 474 39 HOH HOH . 
G 6 HOH A 40 475 40 HOH HOH . 
G 6 HOH A 41 476 41 HOH HOH . 
G 6 HOH A 42 477 42 HOH HOH . 
G 6 HOH A 43 478 43 HOH HOH . 
G 6 HOH A 44 479 44 HOH HOH . 
G 6 HOH A 45 480 45 HOH HOH . 
G 6 HOH A 46 481 46 HOH HOH . 
G 6 HOH A 47 482 47 HOH HOH . 
G 6 HOH A 48 483 48 HOH HOH . 
G 6 HOH A 49 484 49 HOH HOH . 
G 6 HOH A 50 485 50 HOH HOH . 
G 6 HOH A 51 486 51 HOH HOH . 
G 6 HOH A 52 487 52 HOH HOH . 
G 6 HOH A 53 488 53 HOH HOH . 
G 6 HOH A 54 489 54 HOH HOH . 
G 6 HOH A 55 490 55 HOH HOH . 
G 6 HOH A 56 491 56 HOH HOH . 
G 6 HOH A 57 492 57 HOH HOH . 
G 6 HOH A 58 493 58 HOH HOH . 
G 6 HOH A 59 494 59 HOH HOH . 
G 6 HOH A 60 495 60 HOH HOH . 
G 6 HOH A 61 496 61 HOH HOH . 
G 6 HOH A 62 497 62 HOH HOH . 
G 6 HOH A 63 498 63 HOH HOH . 
G 6 HOH A 64 499 64 HOH HOH . 
G 6 HOH A 65 500 65 HOH HOH . 
G 6 HOH A 66 502 66 HOH HOH . 
G 6 HOH A 67 503 67 HOH HOH . 
G 6 HOH A 68 504 68 HOH HOH . 
G 6 HOH A 69 505 69 HOH HOH . 
G 6 HOH A 70 506 70 HOH HOH . 
G 6 HOH A 71 507 71 HOH HOH . 
G 6 HOH A 72 508 72 HOH HOH . 
G 6 HOH A 73 509 73 HOH HOH . 
G 6 HOH A 74 510 74 HOH HOH . 
G 6 HOH A 75 511 75 HOH HOH . 
G 6 HOH A 76 512 76 HOH HOH . 
G 6 HOH A 77 513 77 HOH HOH . 
G 6 HOH A 78 514 78 HOH HOH . 
G 6 HOH A 79 515 79 HOH HOH . 
G 6 HOH A 80 516 80 HOH HOH . 
G 6 HOH A 81 517 81 HOH HOH . 
G 6 HOH A 82 518 82 HOH HOH . 
G 6 HOH A 83 519 83 HOH HOH . 
G 6 HOH A 84 520 84 HOH HOH . 
G 6 HOH A 85 521 85 HOH HOH . 
G 6 HOH A 86 522 86 HOH HOH . 
G 6 HOH A 87 523 87 HOH HOH . 
G 6 HOH A 88 524 88 HOH HOH . 
G 6 HOH A 89 525 89 HOH HOH . 
G 6 HOH A 90 526 90 HOH HOH . 
G 6 HOH A 91 527 91 HOH HOH . 
G 6 HOH A 92 528 92 HOH HOH . 
G 6 HOH A 93 529 93 HOH HOH . 
G 6 HOH A 94 530 94 HOH HOH . 
G 6 HOH A 95 531 95 HOH HOH . 
G 6 HOH A 96 532 96 HOH HOH . 
G 6 HOH A 97 533 97 HOH HOH . 
G 6 HOH A 98 534 98 HOH HOH . 
G 6 HOH A 99 535 99 HOH HOH . 
G 6 HOH A 100 536 100 HOH HOH . 
G 6 HOH A 101 537 101 HOH HOH . 
G 6 HOH A 102 538 102 HOH HOH . 
G 6 HOH A 103 539 103 HOH HOH . 
G 6 HOH A 104 540 104 HOH HOH . 
G 6 HOH A 105 541 105 HOH HOH . 
G 6 HOH A 106 542 106 HOH HOH . 
G 6 HOH A 107 543 107 HOH HOH . 
G 6 HOH A 108 544 108 HOH HOH . 
G 6 HOH A 109 545 109 HOH HOH . 
G 6 HOH A 110 546 110 HOH HOH . 
G 6 HOH A 111 547 111 HOH HOH . 
G 6 HOH A 112 548 112 HOH HOH . 
G 6 HOH A 113 549 113 HOH HOH . 
G 6 HOH A 114 550 114 HOH HOH . 
G 6 HOH A 115 551 115 HOH HOH . 
G 6 HOH A 116 552 116 HOH HOH . 
G 6 HOH A 117 553 117 HOH HOH . 
G 6 HOH A 118 554 118 HOH HOH . 
G 6 HOH A 119 555 119 HOH HOH . 
G 6 HOH A 120 556 120 HOH HOH . 
G 6 HOH A 121 557 121 HOH HOH . 
G 6 HOH A 122 558 122 HOH HOH . 
G 6 HOH A 123 559 123 HOH HOH . 
G 6 HOH A 124 560 124 HOH HOH . 
G 6 HOH A 125 561 125 HOH HOH . 
G 6 HOH A 126 562 126 HOH HOH . 
G 6 HOH A 127 563 127 HOH HOH . 
G 6 HOH A 128 564 128 HOH HOH . 
G 6 HOH A 129 565 129 HOH HOH . 
G 6 HOH A 130 566 130 HOH HOH . 
G 6 HOH A 131 567 131 HOH HOH . 
G 6 HOH A 132 568 132 HOH HOH . 
G 6 HOH A 133 569 133 HOH HOH . 
G 6 HOH A 134 570 134 HOH HOH . 
G 6 HOH A 135 571 135 HOH HOH . 
G 6 HOH A 136 572 136 HOH HOH . 
G 6 HOH A 137 573 137 HOH HOH . 
G 6 HOH A 138 574 138 HOH HOH . 
G 6 HOH A 139 575 139 HOH HOH . 
G 6 HOH A 140 576 140 HOH HOH . 
G 6 HOH A 141 577 141 HOH HOH . 
G 6 HOH A 142 578 142 HOH HOH . 
G 6 HOH A 143 579 143 HOH HOH . 
G 6 HOH A 144 580 145 HOH HOH . 
G 6 HOH A 145 581 146 HOH HOH . 
G 6 HOH A 146 582 147 HOH HOH . 
G 6 HOH A 147 583 148 HOH HOH . 
G 6 HOH A 148 584 149 HOH HOH . 
G 6 HOH A 149 585 150 HOH HOH . 
G 6 HOH A 150 586 151 HOH HOH . 
G 6 HOH A 151 587 152 HOH HOH . 
G 6 HOH A 152 588 153 HOH HOH . 
G 6 HOH A 153 589 154 HOH HOH . 
G 6 HOH A 154 590 155 HOH HOH . 
G 6 HOH A 155 591 156 HOH HOH . 
G 6 HOH A 156 592 157 HOH HOH . 
G 6 HOH A 157 593 158 HOH HOH . 
G 6 HOH A 158 594 159 HOH HOH . 
G 6 HOH A 159 595 160 HOH HOH . 
G 6 HOH A 160 596 161 HOH HOH . 
G 6 HOH A 161 597 162 HOH HOH . 
G 6 HOH A 162 598 163 HOH HOH . 
G 6 HOH A 163 599 164 HOH HOH . 
G 6 HOH A 164 600 165 HOH HOH . 
G 6 HOH A 165 603 166 HOH HOH . 
G 6 HOH A 166 604 167 HOH HOH . 
G 6 HOH A 167 605 168 HOH HOH . 
G 6 HOH A 168 606 169 HOH HOH . 
G 6 HOH A 169 607 170 HOH HOH . 
G 6 HOH A 170 608 171 HOH HOH . 
G 6 HOH A 171 609 173 HOH HOH . 
G 6 HOH A 172 610 174 HOH HOH . 
G 6 HOH A 173 611 175 HOH HOH . 
G 6 HOH A 174 612 176 HOH HOH . 
G 6 HOH A 175 613 177 HOH HOH . 
G 6 HOH A 176 614 178 HOH HOH . 
G 6 HOH A 177 615 179 HOH HOH . 
G 6 HOH A 178 616 180 HOH HOH . 
G 6 HOH A 179 617 181 HOH HOH . 
G 6 HOH A 180 618 183 HOH HOH . 
G 6 HOH A 181 619 184 HOH HOH . 
G 6 HOH A 182 620 185 HOH HOH . 
G 6 HOH A 183 621 186 HOH HOH . 
G 6 HOH A 184 622 187 HOH HOH . 
G 6 HOH A 185 623 188 HOH HOH . 
G 6 HOH A 186 624 189 HOH HOH . 
G 6 HOH A 187 625 191 HOH HOH . 
G 6 HOH A 188 626 192 HOH HOH . 
G 6 HOH A 189 627 194 HOH HOH . 
G 6 HOH A 190 628 195 HOH HOH . 
G 6 HOH A 191 629 196 HOH HOH . 
G 6 HOH A 192 630 197 HOH HOH . 
G 6 HOH A 193 631 198 HOH HOH . 
G 6 HOH A 194 632 199 HOH HOH . 
G 6 HOH A 195 633 200 HOH HOH . 
G 6 HOH A 196 634 201 HOH HOH . 
G 6 HOH A 197 635 202 HOH HOH . 
G 6 HOH A 198 636 203 HOH HOH . 
G 6 HOH A 199 637 204 HOH HOH . 
G 6 HOH A 200 638 205 HOH HOH . 
G 6 HOH A 201 639 206 HOH HOH . 
G 6 HOH A 202 640 207 HOH HOH . 
G 6 HOH A 203 641 208 HOH HOH . 
G 6 HOH A 204 642 209 HOH HOH . 
G 6 HOH A 205 643 210 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -2.681 -0.238 34.807 1 76.59 ? C1 GOL 435 A 1 
HETATM 2 O O1 GOL . . . D 4 -1.804 0.028 33.72 1 72.44 ? O1 GOL 435 A 1 
HETATM 3 C C2 GOL . . . D 4 -2.038 -1.055 35.983 1 76.38 ? C2 GOL 435 A 1 
HETATM 4 O O2 GOL . . . D 4 -1.3 -0.342 37 1 72.37 ? O2 GOL 435 A 1 
HETATM 5 C C3 GOL . . . D 4 -3.18 -1.711 36.718 1 83.17 ? C3 GOL 435 A 1 
HETATM 6 O O3 GOL . . . D 4 -4.356 -0.986 36.42 1 81.83 ? O3 GOL 435 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#