data_3QD0
#
_model_server_result.job_id            iDURgKOk0DvPjUbV4NIKiQ 
_model_server_result.datetime_utc      '2024-12-02 11:22:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qd0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":361}' 
#
_entry.id    3QD0 
#
_exptl.entry_id    3QD0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3QD0 
_cell.length_a            123.943 
_cell.length_b            123.943 
_cell.length_c            46.987 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QD0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 192 n n 
C1 C2 GOL sing 193 n n 
C1 H11 GOL sing 194 n n 
C1 H12 GOL sing 195 n n 
O1 HO1 GOL sing 196 n n 
C2 O2 GOL sing 197 n n 
C2 C3 GOL sing 198 n n 
C2 H2 GOL sing 199 n n 
O2 HO2 GOL sing 200 n n 
C3 O3 GOL sing 201 n n 
C3 H31 GOL sing 202 n n 
C3 H32 GOL sing 203 n n 
O3 HO3 GOL sing 204 n n 
#
_atom_sites.entry_id                     3QD0 
_atom_sites.fract_transf_matrix[1][1]    0.008068 
_atom_sites.fract_transf_matrix[1][2]    0.004658 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009316 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021282 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 360 359 GOL GOL . 
C 2 GOL A 1 361 360 GOL GOL . 
D 2 GOL A 1 363 363 GOL GOL . 
E 2 GOL A 1 365 365 GOL GOL . 
F 3 SO4 A 1 366 366 SO4 SO4 . 
G 3 SO4 A 1 368 368 SO4 SO4 . 
H 3 SO4 A 1 369 369 SO4 SO4 . 
I 4 3Q4 A 1 370 370 3Q4 3Q4 . 
J 3 SO4 A 1 1 1 SO4 SO4 . 
K 3 SO4 A 1 2 2 SO4 SO4 . 
L 2 GOL A 1 362 360 GOL GOL . 
M 5 HOH A 1 3 3 HOH HOH . 
M 5 HOH A 2 5 5 HOH HOH . 
M 5 HOH A 3 6 6 HOH HOH . 
M 5 HOH A 4 7 7 HOH HOH . 
M 5 HOH A 5 10 10 HOH HOH . 
M 5 HOH A 6 17 17 HOH HOH . 
M 5 HOH A 7 18 18 HOH HOH . 
M 5 HOH A 8 19 19 HOH HOH . 
M 5 HOH A 9 27 27 HOH HOH . 
M 5 HOH A 10 30 30 HOH HOH . 
M 5 HOH A 11 33 33 HOH HOH . 
M 5 HOH A 12 34 34 HOH HOH . 
M 5 HOH A 13 35 35 HOH HOH . 
M 5 HOH A 14 36 36 HOH HOH . 
M 5 HOH A 15 40 40 HOH HOH . 
M 5 HOH A 16 43 43 HOH HOH . 
M 5 HOH A 17 44 44 HOH HOH . 
M 5 HOH A 18 45 45 HOH HOH . 
M 5 HOH A 19 46 46 HOH HOH . 
M 5 HOH A 20 47 47 HOH HOH . 
M 5 HOH A 21 364 2 HOH HOH . 
M 5 HOH A 22 367 48 HOH HOH . 
M 5 HOH A 23 371 49 HOH HOH . 
M 5 HOH A 24 372 51 HOH HOH . 
M 5 HOH A 25 373 52 HOH HOH . 
M 5 HOH A 26 374 53 HOH HOH . 
M 5 HOH A 27 375 54 HOH HOH . 
M 5 HOH A 28 376 55 HOH HOH . 
M 5 HOH A 29 377 56 HOH HOH . 
M 5 HOH A 30 378 57 HOH HOH . 
M 5 HOH A 31 379 58 HOH HOH . 
M 5 HOH A 32 380 59 HOH HOH . 
M 5 HOH A 33 381 60 HOH HOH . 
M 5 HOH A 34 382 61 HOH HOH . 
M 5 HOH A 35 383 62 HOH HOH . 
M 5 HOH A 36 384 63 HOH HOH . 
M 5 HOH A 37 385 64 HOH HOH . 
M 5 HOH A 38 386 65 HOH HOH . 
M 5 HOH A 39 387 66 HOH HOH . 
M 5 HOH A 40 388 67 HOH HOH . 
M 5 HOH A 41 389 68 HOH HOH . 
M 5 HOH A 42 390 69 HOH HOH . 
M 5 HOH A 43 391 70 HOH HOH . 
M 5 HOH A 44 392 71 HOH HOH . 
M 5 HOH A 45 393 72 HOH HOH . 
M 5 HOH A 46 394 73 HOH HOH . 
M 5 HOH A 47 395 74 HOH HOH . 
M 5 HOH A 48 396 75 HOH HOH . 
M 5 HOH A 49 397 76 HOH HOH . 
M 5 HOH A 50 398 77 HOH HOH . 
M 5 HOH A 51 399 78 HOH HOH . 
M 5 HOH A 52 400 79 HOH HOH . 
M 5 HOH A 53 401 81 HOH HOH . 
M 5 HOH A 54 402 82 HOH HOH . 
M 5 HOH A 55 403 83 HOH HOH . 
M 5 HOH A 56 404 84 HOH HOH . 
M 5 HOH A 57 405 85 HOH HOH . 
M 5 HOH A 58 406 86 HOH HOH . 
M 5 HOH A 59 407 87 HOH HOH . 
M 5 HOH A 60 408 88 HOH HOH . 
M 5 HOH A 61 409 89 HOH HOH . 
M 5 HOH A 62 410 93 HOH HOH . 
M 5 HOH A 63 411 94 HOH HOH . 
M 5 HOH A 64 412 95 HOH HOH . 
M 5 HOH A 65 413 96 HOH HOH . 
M 5 HOH A 66 414 97 HOH HOH . 
M 5 HOH A 67 415 98 HOH HOH . 
M 5 HOH A 68 416 99 HOH HOH . 
M 5 HOH A 69 417 100 HOH HOH . 
M 5 HOH A 70 418 101 HOH HOH . 
M 5 HOH A 71 419 102 HOH HOH . 
M 5 HOH A 72 420 103 HOH HOH . 
M 5 HOH A 73 421 104 HOH HOH . 
M 5 HOH A 74 422 105 HOH HOH . 
M 5 HOH A 75 423 106 HOH HOH . 
M 5 HOH A 76 424 107 HOH HOH . 
M 5 HOH A 77 425 108 HOH HOH . 
M 5 HOH A 78 426 109 HOH HOH . 
M 5 HOH A 79 427 110 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -44.212 9.915 -16.983 1 39.34 ? C1 GOL 361 A 1 
HETATM 2 O O1 GOL . . . C 2 -44.207 8.93 -17.994 1 34.99 ? O1 GOL 361 A 1 
HETATM 3 C C2 GOL . . . C 2 -42.826 10.166 -16.41 1 36.51 ? C2 GOL 361 A 1 
HETATM 4 O O2 GOL . . . C 2 -42.664 9.548 -15.143 1 42.89 ? O2 GOL 361 A 1 
HETATM 5 C C3 GOL . . . C 2 -41.774 9.529 -17.28 1 32.89 ? C3 GOL 361 A 1 
HETATM 6 O O3 GOL . . . C 2 -40.714 9.195 -16.386 1 47.61 ? O3 GOL 361 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#