data_3QD4
#
_model_server_result.job_id            NKrvRthNgkRVLWP4oQdG-A 
_model_server_result.datetime_utc      '2024-10-12 15:24:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qd4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":360}' 
#
_entry.id    3QD4 
#
_exptl.entry_id    3QD4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              438.526 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'tert-butyl {(3R,5R)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-5-methylpiperidin-3-yl}carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3QD4 
_cell.length_a            124.315 
_cell.length_b            124.315 
_cell.length_c            47.017 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QD4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C22 H30 N8 O2' 
_chem_comp.formula_weight    438.526 
_chem_comp.id                3Q6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'tert-butyl {(3R,5R)-1-[2-amino-6-(3-amino-2H-indazol-6-yl)pyrimidin-4-yl]-5-methylpiperidin-3-yl}carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 3Q6 doub 1 n y 
C5 C1 3Q6 sing 2 n y 
C1 H1 3Q6 sing 3 n n 
C6 C2 3Q6 sing 4 n y 
C2 H2 3Q6 sing 5 n n 
C3 C6 3Q6 doub 6 n y 
C3 C7 3Q6 sing 7 n y 
C3 H3 3Q6 sing 8 n n 
C9 C4 3Q6 doub 9 n y 
C8 C4 3Q6 sing 10 n y 
C4 H4 3Q6 sing 11 n n 
C7 C5 3Q6 sing 12 n y 
C5 C10 3Q6 doub 13 n y 
C8 C6 3Q6 sing 14 n y 
N26 C7 3Q6 doub 15 n y 
N23 C8 3Q6 doub 16 n y 
N24 C9 3Q6 sing 17 n y 
C9 N27 3Q6 sing 18 n n 
N25 C10 3Q6 sing 19 n y 
C10 N28 3Q6 sing 20 n n 
N29 C11 3Q6 sing 21 n n 
C11 N24 3Q6 doub 22 n y 
C11 N23 3Q6 sing 23 n y 
O32 C12 3Q6 sing 24 n n 
N30 C12 3Q6 sing 25 n n 
C12 O31 3Q6 doub 26 n n 
C17 C13 3Q6 sing 27 n n 
C13 C16 3Q6 sing 28 n n 
C13 H13 3Q6 sing 29 n n 
C13 H13A 3Q6 sing 30 n n 
N27 C14 3Q6 sing 31 n n 
C14 C16 3Q6 sing 32 n n 
C14 H14 3Q6 sing 33 n n 
C14 H14A 3Q6 sing 34 n n 
C15 N27 3Q6 sing 35 n n 
C15 C17 3Q6 sing 36 n n 
C15 H15 3Q6 sing 37 n n 
C15 H15A 3Q6 sing 38 n n 
C16 C18 3Q6 sing 39 n n 
C16 H16 3Q6 sing 40 n n 
N30 C17 3Q6 sing 41 n n 
C17 H17 3Q6 sing 42 n n 
C18 H18 3Q6 sing 43 n n 
C18 H18A 3Q6 sing 44 n n 
C18 H18B 3Q6 sing 45 n n 
C22 C19 3Q6 sing 46 n n 
C19 H19 3Q6 sing 47 n n 
C19 H19A 3Q6 sing 48 n n 
C19 H19B 3Q6 sing 49 n n 
C20 C22 3Q6 sing 50 n n 
C20 H20 3Q6 sing 51 n n 
C20 H20A 3Q6 sing 52 n n 
C20 H20B 3Q6 sing 53 n n 
C21 C22 3Q6 sing 54 n n 
C21 H21 3Q6 sing 55 n n 
C21 H21A 3Q6 sing 56 n n 
C21 H21B 3Q6 sing 57 n n 
O32 C22 3Q6 sing 58 n n 
N26 N25 3Q6 sing 59 n y 
N28 HN28 3Q6 sing 60 n n 
N28 HN2A 3Q6 sing 61 n n 
N29 HN29 3Q6 sing 62 n n 
N29 HN2B 3Q6 sing 63 n n 
N30 HN30 3Q6 sing 64 n n 
N25 HN25 3Q6 sing 65 n n 
#
_atom_sites.entry_id                     3QD4 
_atom_sites.fract_transf_matrix[1][1]    0.008044 
_atom_sites.fract_transf_matrix[1][2]    0.004644 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009289 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021269 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 3Q6 A 1 360 359 3Q6 3Q6 . 
C 3 SO4 A 1 1 1 SO4 SO4 . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 7 7 HOH HOH . 
D 4 HOH A 7 8 8 HOH HOH . 
D 4 HOH A 8 9 9 HOH HOH . 
D 4 HOH A 9 10 10 HOH HOH . 
D 4 HOH A 10 11 11 HOH HOH . 
D 4 HOH A 11 12 12 HOH HOH . 
D 4 HOH A 12 13 13 HOH HOH . 
D 4 HOH A 13 14 14 HOH HOH . 
D 4 HOH A 14 15 15 HOH HOH . 
D 4 HOH A 15 16 16 HOH HOH . 
D 4 HOH A 16 17 17 HOH HOH . 
D 4 HOH A 17 18 18 HOH HOH . 
D 4 HOH A 18 19 19 HOH HOH . 
D 4 HOH A 19 20 20 HOH HOH . 
D 4 HOH A 20 21 21 HOH HOH . 
D 4 HOH A 21 22 22 HOH HOH . 
D 4 HOH A 22 23 23 HOH HOH . 
D 4 HOH A 23 24 24 HOH HOH . 
D 4 HOH A 24 25 25 HOH HOH . 
D 4 HOH A 25 26 26 HOH HOH . 
D 4 HOH A 26 361 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3Q6 . . . B 2 -41.124 16.469 12.948 1 25.66 ? C1 3Q6 360 A 1 
HETATM 2 C C2 3Q6 . . . B 2 -42.282 17.141 12.6 1 28.73 ? C2 3Q6 360 A 1 
HETATM 3 C C3 3Q6 . . . B 2 -43.34 15.152 11.822 1 28.02 ? C3 3Q6 360 A 1 
HETATM 4 C C4 3Q6 . . . B 2 -44.807 18.542 11.873 1 26.28 ? C4 3Q6 360 A 1 
HETATM 5 C C5 3Q6 . . . B 2 -41.083 15.098 12.724 1 26.54 ? C5 3Q6 360 A 1 
HETATM 6 C C6 3Q6 . . . B 2 -43.376 16.511 12.036 1 31.63 ? C6 3Q6 360 A 1 
HETATM 7 C C7 3Q6 . . . B 2 -42.19 14.487 12.179 1 28.76 ? C7 3Q6 360 A 1 
HETATM 8 C C8 3Q6 . . . B 2 -44.584 17.207 11.627 1 30.03 ? C8 3Q6 360 A 1 
HETATM 9 C C9 3Q6 . . . B 2 -46.02 19.05 11.444 1 31 ? C9 3Q6 360 A 1 
HETATM 10 C C10 3Q6 . . . B 2 -40.142 14.033 12.906 1 29.87 ? C10 3Q6 360 A 1 
HETATM 11 C C11 3Q6 . . . B 2 -46.65 17.015 10.629 1 28.81 ? C11 3Q6 360 A 1 
HETATM 12 C C12 3Q6 . . . B 2 -50.474 21.703 12.333 1 28.8 ? C12 3Q6 360 A 1 
HETATM 13 C C13 3Q6 . . . B 2 -47.046 22.569 13.04 1 24.4 ? C13 3Q6 360 A 1 
HETATM 14 C C14 3Q6 . . . B 2 -45.171 21.282 11.955 1 28.86 ? C14 3Q6 360 A 1 
HETATM 15 C C15 3Q6 . . . B 2 -47.462 21.002 11.099 1 24.43 ? C15 3Q6 360 A 1 
HETATM 16 C C16 3Q6 . . . B 2 -45.651 21.965 13.229 1 31 ? C16 3Q6 360 A 1 
HETATM 17 C C17 3Q6 . . . B 2 -48.039 21.627 12.357 1 28.35 ? C17 3Q6 360 A 1 
HETATM 18 C C18 3Q6 . . . B 2 -45.672 20.948 14.345 1 27.53 ? C18 3Q6 360 A 1 
HETATM 19 C C19 3Q6 . . . B 2 -53.151 22.124 13.473 1 32.6 ? C19 3Q6 360 A 1 
HETATM 20 C C20 3Q6 . . . B 2 -53.561 23.292 11.317 1 28.31 ? C20 3Q6 360 A 1 
HETATM 21 C C21 3Q6 . . . B 2 -53.192 20.878 11.295 1 25.9 ? C21 3Q6 360 A 1 
HETATM 22 C C22 3Q6 . . . B 2 -52.807 22.166 11.991 1 37.19 ? C22 3Q6 360 A 1 
HETATM 23 N N23 3Q6 . . . B 2 -45.495 16.444 11 1 28.46 ? N23 3Q6 360 A 1 
HETATM 24 N N24 3Q6 . . . B 2 -46.952 18.301 10.842 1 27.72 ? N24 3Q6 360 A 1 
HETATM 25 N N25 3Q6 . . . B 2 -40.641 12.862 12.498 1 26.98 ? N25 3Q6 360 A 1 
HETATM 26 N N26 3Q6 . . . B 2 -41.877 13.157 12.067 1 24.96 ? N26 3Q6 360 A 1 
HETATM 27 N N27 3Q6 . . . B 2 -46.302 20.402 11.727 1 33.63 ? N27 3Q6 360 A 1 
HETATM 28 N N28 3Q6 . . . B 2 -38.897 14.194 13.427 1 24.34 ? N28 3Q6 360 A 1 
HETATM 29 N N29 3Q6 . . . B 2 -47.611 16.226 9.984 1 23.26 ? N29 3Q6 360 A 1 
HETATM 30 N N30 3Q6 . . . B 2 -49.269 22.313 12.096 1 30.79 ? N30 3Q6 360 A 1 
HETATM 31 O O31 3Q6 . . . B 2 -50.66 20.644 12.915 1 29.2 ? O31 3Q6 360 A 1 
HETATM 32 O O32 3Q6 . . . B 2 -51.427 22.497 11.789 1 32.43 ? O32 3Q6 360 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#