data_3QE8
#
_model_server_result.job_id            cJJNeeG3sR1-IXBUi4uHQg 
_model_server_result.datetime_utc      '2024-12-16 15:00:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qe8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":191}' 
#
_entry.id    3QE8 
#
_exptl.entry_id    3QE8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3QE8 
_cell.length_a            36.896 
_cell.length_b            77.996 
_cell.length_c            80.081 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QE8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 B SG CYS 6 B CYS 6 1_555 B SG CYS 127 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf7 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf8 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 C RE REI . A REI 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc2 B NE2 HIS 15 B HIS 15 1_555 F RE REI . B REI 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3QE8 
_atom_sites.fract_transf_matrix[1][1]    0.027103 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012821 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012487 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 REI A 1 150 150 REI RE . 
D 3 EDO A 1 190 190 EDO EDO . 
E 3 EDO A 1 191 191 EDO EDO . 
F 2 REI B 1 170 170 REI RE . 
G 4 CL B 1 200 200 CL CL . 
H 4 CL B 1 201 201 CL CL . 
I 4 CL B 1 202 202 CL CL . 
J 5 HOH A 1 300 300 HOH HOH . 
J 5 HOH A 2 303 303 HOH HOH . 
J 5 HOH A 3 307 307 HOH HOH . 
J 5 HOH A 4 308 308 HOH HOH . 
J 5 HOH A 5 309 309 HOH HOH . 
J 5 HOH A 6 310 310 HOH HOH . 
J 5 HOH A 7 313 313 HOH HOH . 
J 5 HOH A 8 314 314 HOH HOH . 
J 5 HOH A 9 315 315 HOH HOH . 
J 5 HOH A 10 316 316 HOH HOH . 
J 5 HOH A 11 317 317 HOH HOH . 
J 5 HOH A 12 320 320 HOH HOH . 
J 5 HOH A 13 321 321 HOH HOH . 
J 5 HOH A 14 324 324 HOH HOH . 
J 5 HOH A 15 327 327 HOH HOH . 
J 5 HOH A 16 330 330 HOH HOH . 
J 5 HOH A 17 332 332 HOH HOH . 
J 5 HOH A 18 333 333 HOH HOH . 
J 5 HOH A 19 334 334 HOH HOH . 
J 5 HOH A 20 335 335 HOH HOH . 
J 5 HOH A 21 336 336 HOH HOH . 
J 5 HOH A 22 338 338 HOH HOH . 
J 5 HOH A 23 340 340 HOH HOH . 
J 5 HOH A 24 341 341 HOH HOH . 
J 5 HOH A 25 342 342 HOH HOH . 
J 5 HOH A 26 343 343 HOH HOH . 
J 5 HOH A 27 345 345 HOH HOH . 
J 5 HOH A 28 346 346 HOH HOH . 
J 5 HOH A 29 349 349 HOH HOH . 
J 5 HOH A 30 350 350 HOH HOH . 
J 5 HOH A 31 351 351 HOH HOH . 
J 5 HOH A 32 353 353 HOH HOH . 
J 5 HOH A 33 355 355 HOH HOH . 
J 5 HOH A 34 359 359 HOH HOH . 
J 5 HOH A 35 361 361 HOH HOH . 
J 5 HOH A 36 364 364 HOH HOH . 
J 5 HOH A 37 367 367 HOH HOH . 
J 5 HOH A 38 369 369 HOH HOH . 
J 5 HOH A 39 373 373 HOH HOH . 
J 5 HOH A 40 374 374 HOH HOH . 
J 5 HOH A 41 376 376 HOH HOH . 
J 5 HOH A 42 377 377 HOH HOH . 
J 5 HOH A 43 379 379 HOH HOH . 
J 5 HOH A 44 380 380 HOH HOH . 
J 5 HOH A 45 381 381 HOH HOH . 
J 5 HOH A 46 385 385 HOH HOH . 
J 5 HOH A 47 388 388 HOH HOH . 
J 5 HOH A 48 391 391 HOH HOH . 
J 5 HOH A 49 393 393 HOH HOH . 
J 5 HOH A 50 394 394 HOH HOH . 
J 5 HOH A 51 399 399 HOH HOH . 
J 5 HOH A 52 400 400 HOH HOH . 
J 5 HOH A 53 402 402 HOH HOH . 
J 5 HOH A 54 404 404 HOH HOH . 
J 5 HOH A 55 405 405 HOH HOH . 
J 5 HOH A 56 413 413 HOH HOH . 
J 5 HOH A 57 415 415 HOH HOH . 
J 5 HOH A 58 420 420 HOH HOH . 
J 5 HOH A 59 421 421 HOH HOH . 
J 5 HOH A 60 423 423 HOH HOH . 
J 5 HOH A 61 424 424 HOH HOH . 
J 5 HOH A 62 425 425 HOH HOH . 
J 5 HOH A 63 427 427 HOH HOH . 
J 5 HOH A 64 431 431 HOH HOH . 
J 5 HOH A 65 436 436 HOH HOH . 
J 5 HOH A 66 437 437 HOH HOH . 
J 5 HOH A 67 438 438 HOH HOH . 
J 5 HOH A 68 439 439 HOH HOH . 
J 5 HOH A 69 440 440 HOH HOH . 
J 5 HOH A 70 441 441 HOH HOH . 
J 5 HOH A 71 443 443 HOH HOH . 
J 5 HOH A 72 445 445 HOH HOH . 
J 5 HOH A 73 446 446 HOH HOH . 
J 5 HOH A 74 449 449 HOH HOH . 
J 5 HOH A 75 451 451 HOH HOH . 
J 5 HOH A 76 452 452 HOH HOH . 
J 5 HOH A 77 453 453 HOH HOH . 
J 5 HOH A 78 455 455 HOH HOH . 
J 5 HOH A 79 457 457 HOH HOH . 
J 5 HOH A 80 458 458 HOH HOH . 
J 5 HOH A 81 460 460 HOH HOH . 
J 5 HOH A 82 462 462 HOH HOH . 
J 5 HOH A 83 463 463 HOH HOH . 
J 5 HOH A 84 464 464 HOH HOH . 
J 5 HOH A 85 468 468 HOH HOH . 
K 5 HOH B 1 301 301 HOH HOH . 
K 5 HOH B 2 302 302 HOH HOH . 
K 5 HOH B 3 304 304 HOH HOH . 
K 5 HOH B 4 305 305 HOH HOH . 
K 5 HOH B 5 306 306 HOH HOH . 
K 5 HOH B 6 311 311 HOH HOH . 
K 5 HOH B 7 312 312 HOH HOH . 
K 5 HOH B 8 318 318 HOH HOH . 
K 5 HOH B 9 319 319 HOH HOH . 
K 5 HOH B 10 322 322 HOH HOH . 
K 5 HOH B 11 323 323 HOH HOH . 
K 5 HOH B 12 325 325 HOH HOH . 
K 5 HOH B 13 326 326 HOH HOH . 
K 5 HOH B 14 328 328 HOH HOH . 
K 5 HOH B 15 329 329 HOH HOH . 
K 5 HOH B 16 331 331 HOH HOH . 
K 5 HOH B 17 337 337 HOH HOH . 
K 5 HOH B 18 339 339 HOH HOH . 
K 5 HOH B 19 344 344 HOH HOH . 
K 5 HOH B 20 347 347 HOH HOH . 
K 5 HOH B 21 348 348 HOH HOH . 
K 5 HOH B 22 352 352 HOH HOH . 
K 5 HOH B 23 354 354 HOH HOH . 
K 5 HOH B 24 356 356 HOH HOH . 
K 5 HOH B 25 357 357 HOH HOH . 
K 5 HOH B 26 358 358 HOH HOH . 
K 5 HOH B 27 360 360 HOH HOH . 
K 5 HOH B 28 362 362 HOH HOH . 
K 5 HOH B 29 363 363 HOH HOH . 
K 5 HOH B 30 365 365 HOH HOH . 
K 5 HOH B 31 366 366 HOH HOH . 
K 5 HOH B 32 368 368 HOH HOH . 
K 5 HOH B 33 370 370 HOH HOH . 
K 5 HOH B 34 371 371 HOH HOH . 
K 5 HOH B 35 372 372 HOH HOH . 
K 5 HOH B 36 375 375 HOH HOH . 
K 5 HOH B 37 378 378 HOH HOH . 
K 5 HOH B 38 382 382 HOH HOH . 
K 5 HOH B 39 383 383 HOH HOH . 
K 5 HOH B 40 384 384 HOH HOH . 
K 5 HOH B 41 386 386 HOH HOH . 
K 5 HOH B 42 387 387 HOH HOH . 
K 5 HOH B 43 389 389 HOH HOH . 
K 5 HOH B 44 390 390 HOH HOH . 
K 5 HOH B 45 392 392 HOH HOH . 
K 5 HOH B 46 395 395 HOH HOH . 
K 5 HOH B 47 396 396 HOH HOH . 
K 5 HOH B 48 397 397 HOH HOH . 
K 5 HOH B 49 398 398 HOH HOH . 
K 5 HOH B 50 401 401 HOH HOH . 
K 5 HOH B 51 403 403 HOH HOH . 
K 5 HOH B 52 406 406 HOH HOH . 
K 5 HOH B 53 407 407 HOH HOH . 
K 5 HOH B 54 408 408 HOH HOH . 
K 5 HOH B 55 409 409 HOH HOH . 
K 5 HOH B 56 410 410 HOH HOH . 
K 5 HOH B 57 411 411 HOH HOH . 
K 5 HOH B 58 412 412 HOH HOH . 
K 5 HOH B 59 414 414 HOH HOH . 
K 5 HOH B 60 416 416 HOH HOH . 
K 5 HOH B 61 417 417 HOH HOH . 
K 5 HOH B 62 418 418 HOH HOH . 
K 5 HOH B 63 419 419 HOH HOH . 
K 5 HOH B 64 422 422 HOH HOH . 
K 5 HOH B 65 426 426 HOH HOH . 
K 5 HOH B 66 428 428 HOH HOH . 
K 5 HOH B 67 429 429 HOH HOH . 
K 5 HOH B 68 430 430 HOH HOH . 
K 5 HOH B 69 432 432 HOH HOH . 
K 5 HOH B 70 433 433 HOH HOH . 
K 5 HOH B 71 434 434 HOH HOH . 
K 5 HOH B 72 435 435 HOH HOH . 
K 5 HOH B 73 442 442 HOH HOH . 
K 5 HOH B 74 444 444 HOH HOH . 
K 5 HOH B 75 447 447 HOH HOH . 
K 5 HOH B 76 448 448 HOH HOH . 
K 5 HOH B 77 450 450 HOH HOH . 
K 5 HOH B 78 454 454 HOH HOH . 
K 5 HOH B 79 456 456 HOH HOH . 
K 5 HOH B 80 459 459 HOH HOH . 
K 5 HOH B 81 461 461 HOH HOH . 
K 5 HOH B 82 465 465 HOH HOH . 
K 5 HOH B 83 466 466 HOH HOH . 
K 5 HOH B 84 467 467 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 -18.981 16.832 -9.582 1 31.27 ? C1 EDO 191 A 1 
HETATM 2 O O1 EDO . . . E 3 -18.167 16.769 -8.389 1 32.48 ? O1 EDO 191 A 1 
HETATM 3 C C2 EDO . . . E 3 -19.503 16.495 -10.996 1 33.18 ? C2 EDO 191 A 1 
HETATM 4 O O2 EDO . . . E 3 -20.042 15.874 -12.175 1 46.05 ? O2 EDO 191 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#