data_3QE8 # _model_server_result.job_id cJJNeeG3sR1-IXBUi4uHQg _model_server_result.datetime_utc '2024-12-16 15:00:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qe8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":191}' # _entry.id 3QE8 # _exptl.entry_id 3QE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QE8 _cell.length_a 36.896 _cell.length_b 77.996 _cell.length_c 80.081 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 B SG CYS 6 B CYS 6 1_555 B SG CYS 127 B CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 30 B CYS 30 1_555 B SG CYS 115 B CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf7 B SG CYS 64 B CYS 64 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf8 B SG CYS 76 B CYS 76 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 C RE REI . A REI 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 B NE2 HIS 15 B HIS 15 1_555 F RE REI . B REI 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3QE8 _atom_sites.fract_transf_matrix[1][1] 0.027103 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012487 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 REI A 1 150 150 REI RE . D 3 EDO A 1 190 190 EDO EDO . E 3 EDO A 1 191 191 EDO EDO . F 2 REI B 1 170 170 REI RE . G 4 CL B 1 200 200 CL CL . H 4 CL B 1 201 201 CL CL . I 4 CL B 1 202 202 CL CL . J 5 HOH A 1 300 300 HOH HOH . J 5 HOH A 2 303 303 HOH HOH . J 5 HOH A 3 307 307 HOH HOH . J 5 HOH A 4 308 308 HOH HOH . J 5 HOH A 5 309 309 HOH HOH . J 5 HOH A 6 310 310 HOH HOH . J 5 HOH A 7 313 313 HOH HOH . J 5 HOH A 8 314 314 HOH HOH . J 5 HOH A 9 315 315 HOH HOH . J 5 HOH A 10 316 316 HOH HOH . J 5 HOH A 11 317 317 HOH HOH . J 5 HOH A 12 320 320 HOH HOH . J 5 HOH A 13 321 321 HOH HOH . J 5 HOH A 14 324 324 HOH HOH . J 5 HOH A 15 327 327 HOH HOH . J 5 HOH A 16 330 330 HOH HOH . J 5 HOH A 17 332 332 HOH HOH . J 5 HOH A 18 333 333 HOH HOH . J 5 HOH A 19 334 334 HOH HOH . J 5 HOH A 20 335 335 HOH HOH . J 5 HOH A 21 336 336 HOH HOH . J 5 HOH A 22 338 338 HOH HOH . J 5 HOH A 23 340 340 HOH HOH . J 5 HOH A 24 341 341 HOH HOH . J 5 HOH A 25 342 342 HOH HOH . J 5 HOH A 26 343 343 HOH HOH . J 5 HOH A 27 345 345 HOH HOH . J 5 HOH A 28 346 346 HOH HOH . J 5 HOH A 29 349 349 HOH HOH . J 5 HOH A 30 350 350 HOH HOH . J 5 HOH A 31 351 351 HOH HOH . J 5 HOH A 32 353 353 HOH HOH . J 5 HOH A 33 355 355 HOH HOH . J 5 HOH A 34 359 359 HOH HOH . J 5 HOH A 35 361 361 HOH HOH . J 5 HOH A 36 364 364 HOH HOH . J 5 HOH A 37 367 367 HOH HOH . J 5 HOH A 38 369 369 HOH HOH . J 5 HOH A 39 373 373 HOH HOH . J 5 HOH A 40 374 374 HOH HOH . J 5 HOH A 41 376 376 HOH HOH . J 5 HOH A 42 377 377 HOH HOH . J 5 HOH A 43 379 379 HOH HOH . J 5 HOH A 44 380 380 HOH HOH . J 5 HOH A 45 381 381 HOH HOH . J 5 HOH A 46 385 385 HOH HOH . J 5 HOH A 47 388 388 HOH HOH . J 5 HOH A 48 391 391 HOH HOH . J 5 HOH A 49 393 393 HOH HOH . J 5 HOH A 50 394 394 HOH HOH . J 5 HOH A 51 399 399 HOH HOH . J 5 HOH A 52 400 400 HOH HOH . J 5 HOH A 53 402 402 HOH HOH . J 5 HOH A 54 404 404 HOH HOH . J 5 HOH A 55 405 405 HOH HOH . J 5 HOH A 56 413 413 HOH HOH . J 5 HOH A 57 415 415 HOH HOH . J 5 HOH A 58 420 420 HOH HOH . J 5 HOH A 59 421 421 HOH HOH . J 5 HOH A 60 423 423 HOH HOH . J 5 HOH A 61 424 424 HOH HOH . J 5 HOH A 62 425 425 HOH HOH . J 5 HOH A 63 427 427 HOH HOH . J 5 HOH A 64 431 431 HOH HOH . J 5 HOH A 65 436 436 HOH HOH . J 5 HOH A 66 437 437 HOH HOH . J 5 HOH A 67 438 438 HOH HOH . J 5 HOH A 68 439 439 HOH HOH . J 5 HOH A 69 440 440 HOH HOH . J 5 HOH A 70 441 441 HOH HOH . J 5 HOH A 71 443 443 HOH HOH . J 5 HOH A 72 445 445 HOH HOH . J 5 HOH A 73 446 446 HOH HOH . J 5 HOH A 74 449 449 HOH HOH . J 5 HOH A 75 451 451 HOH HOH . J 5 HOH A 76 452 452 HOH HOH . J 5 HOH A 77 453 453 HOH HOH . J 5 HOH A 78 455 455 HOH HOH . J 5 HOH A 79 457 457 HOH HOH . J 5 HOH A 80 458 458 HOH HOH . J 5 HOH A 81 460 460 HOH HOH . J 5 HOH A 82 462 462 HOH HOH . J 5 HOH A 83 463 463 HOH HOH . J 5 HOH A 84 464 464 HOH HOH . J 5 HOH A 85 468 468 HOH HOH . K 5 HOH B 1 301 301 HOH HOH . K 5 HOH B 2 302 302 HOH HOH . K 5 HOH B 3 304 304 HOH HOH . K 5 HOH B 4 305 305 HOH HOH . K 5 HOH B 5 306 306 HOH HOH . K 5 HOH B 6 311 311 HOH HOH . K 5 HOH B 7 312 312 HOH HOH . K 5 HOH B 8 318 318 HOH HOH . K 5 HOH B 9 319 319 HOH HOH . K 5 HOH B 10 322 322 HOH HOH . K 5 HOH B 11 323 323 HOH HOH . K 5 HOH B 12 325 325 HOH HOH . K 5 HOH B 13 326 326 HOH HOH . K 5 HOH B 14 328 328 HOH HOH . K 5 HOH B 15 329 329 HOH HOH . K 5 HOH B 16 331 331 HOH HOH . K 5 HOH B 17 337 337 HOH HOH . K 5 HOH B 18 339 339 HOH HOH . K 5 HOH B 19 344 344 HOH HOH . K 5 HOH B 20 347 347 HOH HOH . K 5 HOH B 21 348 348 HOH HOH . K 5 HOH B 22 352 352 HOH HOH . K 5 HOH B 23 354 354 HOH HOH . K 5 HOH B 24 356 356 HOH HOH . K 5 HOH B 25 357 357 HOH HOH . K 5 HOH B 26 358 358 HOH HOH . K 5 HOH B 27 360 360 HOH HOH . K 5 HOH B 28 362 362 HOH HOH . K 5 HOH B 29 363 363 HOH HOH . K 5 HOH B 30 365 365 HOH HOH . K 5 HOH B 31 366 366 HOH HOH . K 5 HOH B 32 368 368 HOH HOH . K 5 HOH B 33 370 370 HOH HOH . K 5 HOH B 34 371 371 HOH HOH . K 5 HOH B 35 372 372 HOH HOH . K 5 HOH B 36 375 375 HOH HOH . K 5 HOH B 37 378 378 HOH HOH . K 5 HOH B 38 382 382 HOH HOH . K 5 HOH B 39 383 383 HOH HOH . K 5 HOH B 40 384 384 HOH HOH . K 5 HOH B 41 386 386 HOH HOH . K 5 HOH B 42 387 387 HOH HOH . K 5 HOH B 43 389 389 HOH HOH . K 5 HOH B 44 390 390 HOH HOH . K 5 HOH B 45 392 392 HOH HOH . K 5 HOH B 46 395 395 HOH HOH . K 5 HOH B 47 396 396 HOH HOH . K 5 HOH B 48 397 397 HOH HOH . K 5 HOH B 49 398 398 HOH HOH . K 5 HOH B 50 401 401 HOH HOH . K 5 HOH B 51 403 403 HOH HOH . K 5 HOH B 52 406 406 HOH HOH . K 5 HOH B 53 407 407 HOH HOH . K 5 HOH B 54 408 408 HOH HOH . K 5 HOH B 55 409 409 HOH HOH . K 5 HOH B 56 410 410 HOH HOH . K 5 HOH B 57 411 411 HOH HOH . K 5 HOH B 58 412 412 HOH HOH . K 5 HOH B 59 414 414 HOH HOH . K 5 HOH B 60 416 416 HOH HOH . K 5 HOH B 61 417 417 HOH HOH . K 5 HOH B 62 418 418 HOH HOH . K 5 HOH B 63 419 419 HOH HOH . K 5 HOH B 64 422 422 HOH HOH . K 5 HOH B 65 426 426 HOH HOH . K 5 HOH B 66 428 428 HOH HOH . K 5 HOH B 67 429 429 HOH HOH . K 5 HOH B 68 430 430 HOH HOH . K 5 HOH B 69 432 432 HOH HOH . K 5 HOH B 70 433 433 HOH HOH . K 5 HOH B 71 434 434 HOH HOH . K 5 HOH B 72 435 435 HOH HOH . K 5 HOH B 73 442 442 HOH HOH . K 5 HOH B 74 444 444 HOH HOH . K 5 HOH B 75 447 447 HOH HOH . K 5 HOH B 76 448 448 HOH HOH . K 5 HOH B 77 450 450 HOH HOH . K 5 HOH B 78 454 454 HOH HOH . K 5 HOH B 79 456 456 HOH HOH . K 5 HOH B 80 459 459 HOH HOH . K 5 HOH B 81 461 461 HOH HOH . K 5 HOH B 82 465 465 HOH HOH . K 5 HOH B 83 466 466 HOH HOH . K 5 HOH B 84 467 467 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -18.981 16.832 -9.582 1 31.27 ? C1 EDO 191 A 1 HETATM 2 O O1 EDO . . . E 3 -18.167 16.769 -8.389 1 32.48 ? O1 EDO 191 A 1 HETATM 3 C C2 EDO . . . E 3 -19.503 16.495 -10.996 1 33.18 ? C2 EDO 191 A 1 HETATM 4 O O2 EDO . . . E 3 -20.042 15.874 -12.175 1 46.05 ? O2 EDO 191 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #