data_3QEA # _model_server_result.job_id i4aQXq5ptMyL-GHC7g5abw _model_server_result.datetime_utc '2025-03-05 02:20:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":353}' # _entry.id 3QEA # _exptl.entry_id 3QEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QEA _cell.length_a 71.81 _cell.length_b 71.81 _cell.length_c 181.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 30 Z ASP 30 1_555 E BA BA . Z BA 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.277 ? metalc ? metalc2 A OD1 ASP 152 Z ASP 152 1_555 D BA BA . Z BA 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.275 ? metalc ? metalc3 A OD2 ASP 152 Z ASP 152 1_555 E BA BA . Z BA 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.145 ? metalc ? metalc4 A OD2 ASP 171 Z ASP 171 1_555 D BA BA . Z BA 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.398 ? metalc ? metalc5 A OD1 ASP 173 Z ASP 173 1_555 D BA BA . Z BA 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.456 ? metalc ? metalc6 A O SER 222 Z SER 222 1_555 F BA BA . Z BA 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.211 ? metalc ? metalc7 A OG SER 229 Z SER 229 1_555 F BA BA . Z BA 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.202 ? metalc ? metalc8 F BA BA . Z BA 355 1_555 B OP2 DT 4 A DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.452 ? hydrog WATSON-CRICK hydrog1 B N3 DC 1 A DC 11 1_555 C N1 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N4 DC 1 A DC 11 1_555 C O6 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O2 DC 1 A DC 11 1_555 C N2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog4 B N1 DG 2 A DG 12 1_555 C N3 DC 9 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog5 B O2 DC 3 A DC 13 1_555 C N1 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N3 DT 4 A DT 14 1_555 C N1 DA 7 B DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O4 DT 4 A DT 14 1_555 C N6 DA 7 B DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DA 5 A DA 15 1_555 C N3 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N6 DA 5 A DA 15 1_555 C O4 DT 6 B DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog10 B N2 DG 6 A DG 16 1_555 C O2 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N3 DT 7 A DT 17 1_555 C N1 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O4 DT 7 A DT 17 1_555 C N6 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N3 DC 8 A DC 18 1_555 C N1 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N4 DC 8 A DC 18 1_555 C O6 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O2 DC 8 A DC 18 1_555 C N2 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog16 B N2 DG 9 A DG 19 1_555 C O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QEA _atom_sites.fract_transf_matrix[1][1] 0.013926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013926 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BA Z 1 353 1 BA BA . E 4 BA Z 1 354 1 BA BA . F 4 BA Z 1 355 1 BA BA . G 4 BA Z 1 356 1 BA BA . H 5 HOH Z 1 357 1 HOH HOH . H 5 HOH Z 2 358 2 HOH HOH . H 5 HOH Z 3 359 3 HOH HOH . H 5 HOH Z 4 360 4 HOH HOH . H 5 HOH Z 5 361 5 HOH HOH . H 5 HOH Z 6 362 6 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 0.615 _atom_site.Cartn_y -24.612 _atom_site.Cartn_z 4.372 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 189.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 353 _atom_site.auth_asym_id Z _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #