data_3QFJ
#
_model_server_result.job_id            NFaeiA9SYnI7lfKtRtFqAQ 
_model_server_result.datetime_utc      '2024-11-02 19:37:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qfj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":276}' 
#
_entry.id    3QFJ 
#
_exptl.entry_id    3QFJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    11 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.02 
_cell.angle_gamma         90 
_cell.entry_id            3QFJ 
_cell.length_a            224.008 
_cell.length_b            48.098 
_cell.length_c            92.959 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QFJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
? 6 H N N 
? 6 I N N 
? 6 J N N 
? 6 K N N 
? 6 L N N 
? 6 M N N 
? 6 N N N 
? 6 O N N 
? 6 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 D SG CYS 22 D CYS 22 1_555 D SG CYS 88 D CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf5 D SG CYS 133 D CYS 139 1_555 D SG CYS 183 D CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf6 E SG CYS 23 E CYS 23 1_555 E SG CYS 91 E CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
disulf ? disulf7 E SG CYS 146 E CYS 147 1_555 E SG CYS 211 E CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3QFJ 
_atom_sites.fract_transf_matrix[1][1]    0.004464 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000079 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020791 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010759 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 GOL A 1 276 276 GOL GOL . 
G 6 GOL A 1 277 277 GOL GOL . 
H 6 GOL B 1 100 100 GOL GOL . 
I 6 GOL B 1 101 101 GOL GOL . 
J 6 GOL B 1 102 102 GOL GOL . 
K 6 GOL C 1 10 10 GOL GOL . 
L 6 GOL D 1 207 207 GOL GOL . 
M 6 GOL E 1 247 247 GOL GOL . 
N 6 GOL E 1 248 248 GOL GOL . 
O 6 GOL E 1 249 249 GOL GOL . 
P 6 GOL E 1 250 250 GOL GOL . 
Q 7 HOH A 1 278 278 HOH HOH . 
Q 7 HOH A 2 279 279 HOH HOH . 
Q 7 HOH A 3 280 280 HOH HOH . 
Q 7 HOH A 4 281 281 HOH HOH . 
Q 7 HOH A 5 282 282 HOH HOH . 
Q 7 HOH A 6 283 283 HOH HOH . 
Q 7 HOH A 7 284 284 HOH HOH . 
Q 7 HOH A 8 285 285 HOH HOH . 
Q 7 HOH A 9 286 286 HOH HOH . 
Q 7 HOH A 10 287 287 HOH HOH . 
Q 7 HOH A 11 288 288 HOH HOH . 
Q 7 HOH A 12 289 289 HOH HOH . 
Q 7 HOH A 13 290 290 HOH HOH . 
Q 7 HOH A 14 291 291 HOH HOH . 
Q 7 HOH A 15 292 292 HOH HOH . 
Q 7 HOH A 16 293 293 HOH HOH . 
Q 7 HOH A 17 294 294 HOH HOH . 
Q 7 HOH A 18 295 295 HOH HOH . 
Q 7 HOH A 19 296 296 HOH HOH . 
Q 7 HOH A 20 297 297 HOH HOH . 
Q 7 HOH A 21 298 298 HOH HOH . 
Q 7 HOH A 22 299 299 HOH HOH . 
Q 7 HOH A 23 300 300 HOH HOH . 
Q 7 HOH A 24 301 301 HOH HOH . 
Q 7 HOH A 25 302 302 HOH HOH . 
Q 7 HOH A 26 303 303 HOH HOH . 
Q 7 HOH A 27 304 304 HOH HOH . 
Q 7 HOH A 28 305 305 HOH HOH . 
Q 7 HOH A 29 306 306 HOH HOH . 
Q 7 HOH A 30 307 307 HOH HOH . 
Q 7 HOH A 31 308 308 HOH HOH . 
Q 7 HOH A 32 309 309 HOH HOH . 
Q 7 HOH A 33 310 310 HOH HOH . 
Q 7 HOH A 34 311 311 HOH HOH . 
Q 7 HOH A 35 312 312 HOH HOH . 
Q 7 HOH A 36 313 313 HOH HOH . 
Q 7 HOH A 37 314 314 HOH HOH . 
Q 7 HOH A 38 315 315 HOH HOH . 
Q 7 HOH A 39 316 316 HOH HOH . 
Q 7 HOH A 40 317 317 HOH HOH . 
Q 7 HOH A 41 318 318 HOH HOH . 
Q 7 HOH A 42 319 319 HOH HOH . 
Q 7 HOH A 43 320 320 HOH HOH . 
Q 7 HOH A 44 321 321 HOH HOH . 
Q 7 HOH A 45 322 322 HOH HOH . 
Q 7 HOH A 46 323 323 HOH HOH . 
Q 7 HOH A 47 324 324 HOH HOH . 
Q 7 HOH A 48 325 325 HOH HOH . 
Q 7 HOH A 49 326 326 HOH HOH . 
Q 7 HOH A 50 327 327 HOH HOH . 
Q 7 HOH A 51 328 328 HOH HOH . 
Q 7 HOH A 52 329 329 HOH HOH . 
Q 7 HOH A 53 330 330 HOH HOH . 
Q 7 HOH A 54 331 331 HOH HOH . 
Q 7 HOH A 55 332 332 HOH HOH . 
Q 7 HOH A 56 333 333 HOH HOH . 
Q 7 HOH A 57 334 334 HOH HOH . 
Q 7 HOH A 58 335 335 HOH HOH . 
Q 7 HOH A 59 336 336 HOH HOH . 
Q 7 HOH A 60 337 337 HOH HOH . 
Q 7 HOH A 61 338 338 HOH HOH . 
Q 7 HOH A 62 339 339 HOH HOH . 
Q 7 HOH A 63 340 340 HOH HOH . 
Q 7 HOH A 64 341 341 HOH HOH . 
R 7 HOH B 1 103 103 HOH HOH . 
R 7 HOH B 2 104 104 HOH HOH . 
R 7 HOH B 3 105 105 HOH HOH . 
R 7 HOH B 4 106 106 HOH HOH . 
R 7 HOH B 5 107 107 HOH HOH . 
R 7 HOH B 6 108 108 HOH HOH . 
R 7 HOH B 7 109 109 HOH HOH . 
R 7 HOH B 8 110 110 HOH HOH . 
R 7 HOH B 9 111 111 HOH HOH . 
R 7 HOH B 10 112 112 HOH HOH . 
R 7 HOH B 11 113 113 HOH HOH . 
R 7 HOH B 12 114 114 HOH HOH . 
R 7 HOH B 13 115 115 HOH HOH . 
R 7 HOH B 14 116 116 HOH HOH . 
R 7 HOH B 15 117 117 HOH HOH . 
R 7 HOH B 16 118 118 HOH HOH . 
R 7 HOH B 17 119 119 HOH HOH . 
R 7 HOH B 18 120 120 HOH HOH . 
R 7 HOH B 19 121 121 HOH HOH . 
R 7 HOH B 20 122 122 HOH HOH . 
R 7 HOH B 21 123 123 HOH HOH . 
R 7 HOH B 22 124 124 HOH HOH . 
R 7 HOH B 23 139 139 HOH HOH . 
R 7 HOH B 24 141 141 HOH HOH . 
R 7 HOH B 25 145 145 HOH HOH . 
R 7 HOH B 26 146 146 HOH HOH . 
R 7 HOH B 27 171 171 HOH HOH . 
R 7 HOH B 28 179 179 HOH HOH . 
R 7 HOH B 29 181 181 HOH HOH . 
R 7 HOH B 30 185 185 HOH HOH . 
R 7 HOH B 31 190 190 HOH HOH . 
S 7 HOH C 1 37 37 HOH HOH . 
S 7 HOH C 2 170 170 HOH HOH . 
S 7 HOH C 3 186 186 HOH HOH . 
T 7 HOH D 1 60 60 HOH HOH . 
T 7 HOH D 2 95 95 HOH HOH . 
T 7 HOH D 3 97 97 HOH HOH . 
T 7 HOH D 4 208 208 HOH HOH . 
T 7 HOH D 5 209 209 HOH HOH . 
T 7 HOH D 6 210 210 HOH HOH . 
T 7 HOH D 7 211 211 HOH HOH . 
T 7 HOH D 8 212 212 HOH HOH . 
T 7 HOH D 9 213 213 HOH HOH . 
T 7 HOH D 10 214 214 HOH HOH . 
T 7 HOH D 11 215 215 HOH HOH . 
T 7 HOH D 12 216 216 HOH HOH . 
T 7 HOH D 13 217 217 HOH HOH . 
T 7 HOH D 14 218 218 HOH HOH . 
T 7 HOH D 15 219 219 HOH HOH . 
T 7 HOH D 16 220 220 HOH HOH . 
T 7 HOH D 17 221 221 HOH HOH . 
T 7 HOH D 18 222 222 HOH HOH . 
T 7 HOH D 19 223 223 HOH HOH . 
T 7 HOH D 20 224 224 HOH HOH . 
T 7 HOH D 21 225 225 HOH HOH . 
T 7 HOH D 22 226 226 HOH HOH . 
T 7 HOH D 23 227 227 HOH HOH . 
T 7 HOH D 24 228 228 HOH HOH . 
T 7 HOH D 25 229 229 HOH HOH . 
T 7 HOH D 26 230 230 HOH HOH . 
T 7 HOH D 27 231 231 HOH HOH . 
T 7 HOH D 28 232 232 HOH HOH . 
T 7 HOH D 29 233 233 HOH HOH . 
T 7 HOH D 30 234 234 HOH HOH . 
T 7 HOH D 31 235 235 HOH HOH . 
T 7 HOH D 32 236 236 HOH HOH . 
T 7 HOH D 33 237 237 HOH HOH . 
T 7 HOH D 34 238 238 HOH HOH . 
U 7 HOH E 1 251 251 HOH HOH . 
U 7 HOH E 2 252 252 HOH HOH . 
U 7 HOH E 3 253 253 HOH HOH . 
U 7 HOH E 4 254 254 HOH HOH . 
U 7 HOH E 5 255 255 HOH HOH . 
U 7 HOH E 6 256 256 HOH HOH . 
U 7 HOH E 7 257 257 HOH HOH . 
U 7 HOH E 8 258 258 HOH HOH . 
U 7 HOH E 9 259 259 HOH HOH . 
U 7 HOH E 10 260 260 HOH HOH . 
U 7 HOH E 11 261 261 HOH HOH . 
U 7 HOH E 12 262 262 HOH HOH . 
U 7 HOH E 13 263 263 HOH HOH . 
U 7 HOH E 14 264 264 HOH HOH . 
U 7 HOH E 15 265 265 HOH HOH . 
U 7 HOH E 16 266 266 HOH HOH . 
U 7 HOH E 17 267 267 HOH HOH . 
U 7 HOH E 18 268 268 HOH HOH . 
U 7 HOH E 19 269 269 HOH HOH . 
U 7 HOH E 20 270 270 HOH HOH . 
U 7 HOH E 21 271 271 HOH HOH . 
U 7 HOH E 22 272 272 HOH HOH . 
U 7 HOH E 23 273 273 HOH HOH . 
U 7 HOH E 24 274 274 HOH HOH . 
U 7 HOH E 25 275 275 HOH HOH . 
U 7 HOH E 26 276 276 HOH HOH . 
U 7 HOH E 27 277 277 HOH HOH . 
U 7 HOH E 28 278 278 HOH HOH . 
U 7 HOH E 29 279 279 HOH HOH . 
U 7 HOH E 30 280 280 HOH HOH . 
U 7 HOH E 31 281 281 HOH HOH . 
U 7 HOH E 32 282 282 HOH HOH . 
U 7 HOH E 33 283 283 HOH HOH . 
U 7 HOH E 34 284 284 HOH HOH . 
U 7 HOH E 35 285 285 HOH HOH . 
U 7 HOH E 36 286 286 HOH HOH . 
U 7 HOH E 37 287 287 HOH HOH . 
U 7 HOH E 38 288 288 HOH HOH . 
U 7 HOH E 39 289 289 HOH HOH . 
U 7 HOH E 40 290 290 HOH HOH . 
U 7 HOH E 41 291 291 HOH HOH . 
U 7 HOH E 42 292 292 HOH HOH . 
U 7 HOH E 43 293 293 HOH HOH . 
U 7 HOH E 44 294 294 HOH HOH . 
U 7 HOH E 45 295 295 HOH HOH . 
U 7 HOH E 46 296 296 HOH HOH . 
U 7 HOH E 47 297 297 HOH HOH . 
U 7 HOH E 48 298 298 HOH HOH . 
U 7 HOH E 49 299 299 HOH HOH . 
U 7 HOH E 50 300 300 HOH HOH . 
U 7 HOH E 51 301 301 HOH HOH . 
U 7 HOH E 52 302 302 HOH HOH . 
U 7 HOH E 53 303 303 HOH HOH . 
U 7 HOH E 54 304 304 HOH HOH . 
U 7 HOH E 55 305 305 HOH HOH . 
U 7 HOH E 56 306 306 HOH HOH . 
U 7 HOH E 57 307 307 HOH HOH . 
U 7 HOH E 58 308 308 HOH HOH . 
U 7 HOH E 59 309 309 HOH HOH . 
U 7 HOH E 60 310 310 HOH HOH . 
U 7 HOH E 61 317 317 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 6 22.131 -9.495 20.75 1 72.89 ? C1 GOL 276 A 1 
HETATM 2 O O1 GOL . . . F 6 22.463 -8.164 20.414 1 73.12 ? O1 GOL 276 A 1 
HETATM 3 C C2 GOL . . . F 6 21.567 -9.53 22.165 1 72.78 ? C2 GOL 276 A 1 
HETATM 4 O O2 GOL . . . F 6 21.127 -10.828 22.5 1 72.72 ? O2 GOL 276 A 1 
HETATM 5 C C3 GOL . . . F 6 20.439 -8.519 22.342 1 72.65 ? C3 GOL 276 A 1 
HETATM 6 O O3 GOL . . . F 6 19.596 -8.946 23.39 1 72.46 ? O3 GOL 276 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    47 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           6 
#