data_3QFV # _model_server_result.job_id HJW47dMhx9AdhDH37pDoug _model_server_result.datetime_utc '2024-10-13 02:25:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qfv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":416}' # _entry.id 3QFV # _exptl.entry_id 3QFV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 279.29 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(carbamoylamino)-5-(4-fluorophenyl)thiophene-3-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.69 _cell.angle_gamma 90 _cell.entry_id 3QFV _cell.length_a 44.81 _cell.length_b 123.36 _cell.length_c 85.49 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QFV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id O _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 198 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 198 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id MG _struct_conn.ptnr2_label_comp_id MG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MG _struct_conn.ptnr2_auth_seq_id 419 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.575 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C12 H10 F N3 O2 S' _chem_comp.formula_weight 279.29 _chem_comp.id NM7 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(carbamoylamino)-5-(4-fluorophenyl)thiophene-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CAM NM7 sing 246 n n NAA HNAA NM7 sing 247 n n NAA HNAB NM7 sing 248 n n NAB CAN NM7 sing 249 n n NAB HNAC NM7 sing 250 n n NAB HNAD NM7 sing 251 n n CAM OAC NM7 doub 252 n n OAD CAN NM7 doub 253 n n CAO FAE NM7 sing 254 n n CAH CAF NM7 doub 255 n y CAF CAO NM7 sing 256 n y CAF HAF NM7 sing 257 n n CAI CAG NM7 sing 258 n y CAO CAG NM7 doub 259 n y CAG HAG NM7 sing 260 n n CAH CAP NM7 sing 261 n y CAH HAH NM7 sing 262 n n CAP CAI NM7 doub 263 n y CAI HAI NM7 sing 264 n n CAR CAJ NM7 sing 265 n y CAJ CAQ NM7 doub 266 n y CAJ HAJ NM7 sing 267 n n NAK CAM NM7 sing 268 n n NAK CAS NM7 sing 269 n n NAK HNAK NM7 sing 270 n n CAS SAL NM7 sing 271 n y SAL CAQ NM7 sing 272 n y CAN CAR NM7 sing 273 n n CAQ CAP NM7 sing 274 n y CAR CAS NM7 doub 275 n y # _atom_sites.entry_id 3QFV _atom_sites.fract_transf_matrix[1][1] 0.022316 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004213 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NM7 A 1 416 2 NM7 NM7 . D 3 EDO A 1 417 2 EDO EDO . E 2 NM7 B 1 416 1 NM7 NM7 . F 4 CL B 1 417 1 CL CL . G 4 CL B 1 418 2 CL CL . H 5 MG B 1 419 3 MG MG . I 3 EDO B 1 420 1 EDO EDO . J 3 EDO B 1 421 3 EDO EDO . K 6 HOH A 1 418 6 HOH HOH . K 6 HOH A 2 419 7 HOH HOH . K 6 HOH A 3 420 12 HOH HOH . K 6 HOH A 4 421 15 HOH HOH . K 6 HOH A 5 422 18 HOH HOH . K 6 HOH A 6 423 21 HOH HOH . K 6 HOH A 7 424 28 HOH HOH . K 6 HOH A 8 425 29 HOH HOH . K 6 HOH A 9 426 31 HOH HOH . K 6 HOH A 10 427 40 HOH HOH . K 6 HOH A 11 428 45 HOH HOH . K 6 HOH A 12 429 50 HOH HOH . K 6 HOH A 13 430 51 HOH HOH . K 6 HOH A 14 431 77 HOH HOH . K 6 HOH A 15 432 87 HOH HOH . K 6 HOH A 16 433 121 HOH HOH . K 6 HOH A 17 434 122 HOH HOH . K 6 HOH A 18 435 157 HOH HOH . K 6 HOH A 19 436 165 HOH HOH . K 6 HOH A 20 437 173 HOH HOH . K 6 HOH A 21 438 193 HOH HOH . K 6 HOH A 22 439 202 HOH HOH . K 6 HOH A 23 440 208 HOH HOH . K 6 HOH A 24 441 252 HOH HOH . K 6 HOH A 25 442 266 HOH HOH . K 6 HOH A 26 443 267 HOH HOH . K 6 HOH A 27 444 284 HOH HOH . K 6 HOH A 28 445 291 HOH HOH . K 6 HOH A 29 446 294 HOH HOH . K 6 HOH A 30 447 295 HOH HOH . K 6 HOH A 31 448 296 HOH HOH . K 6 HOH A 32 449 297 HOH HOH . K 6 HOH A 33 450 302 HOH HOH . K 6 HOH A 34 451 304 HOH HOH . K 6 HOH A 35 452 305 HOH HOH . K 6 HOH A 36 453 308 HOH HOH . K 6 HOH A 37 454 309 HOH HOH . K 6 HOH A 38 455 315 HOH HOH . K 6 HOH A 39 456 318 HOH HOH . K 6 HOH A 40 457 319 HOH HOH . K 6 HOH A 41 458 320 HOH HOH . K 6 HOH A 42 459 321 HOH HOH . K 6 HOH A 43 460 324 HOH HOH . K 6 HOH A 44 461 325 HOH HOH . K 6 HOH A 45 462 330 HOH HOH . K 6 HOH A 46 463 332 HOH HOH . K 6 HOH A 47 464 333 HOH HOH . K 6 HOH A 48 465 334 HOH HOH . K 6 HOH A 49 466 342 HOH HOH . K 6 HOH A 50 467 343 HOH HOH . K 6 HOH A 51 468 347 HOH HOH . K 6 HOH A 52 469 349 HOH HOH . K 6 HOH A 53 470 351 HOH HOH . L 6 HOH B 1 422 3 HOH HOH . L 6 HOH B 2 423 26 HOH HOH . L 6 HOH B 3 424 33 HOH HOH . L 6 HOH B 4 425 36 HOH HOH . L 6 HOH B 5 426 38 HOH HOH . L 6 HOH B 6 427 54 HOH HOH . L 6 HOH B 7 428 65 HOH HOH . L 6 HOH B 8 429 81 HOH HOH . L 6 HOH B 9 430 98 HOH HOH . L 6 HOH B 10 431 100 HOH HOH . L 6 HOH B 11 432 127 HOH HOH . L 6 HOH B 12 433 130 HOH HOH . L 6 HOH B 13 434 141 HOH HOH . L 6 HOH B 14 435 142 HOH HOH . L 6 HOH B 15 436 145 HOH HOH . L 6 HOH B 16 437 166 HOH HOH . L 6 HOH B 17 438 178 HOH HOH . L 6 HOH B 18 439 201 HOH HOH . L 6 HOH B 19 440 236 HOH HOH . L 6 HOH B 20 441 237 HOH HOH . L 6 HOH B 21 442 238 HOH HOH . L 6 HOH B 22 443 239 HOH HOH . L 6 HOH B 23 444 243 HOH HOH . L 6 HOH B 24 445 255 HOH HOH . L 6 HOH B 25 446 257 HOH HOH . L 6 HOH B 26 447 264 HOH HOH . L 6 HOH B 27 448 269 HOH HOH . L 6 HOH B 28 449 275 HOH HOH . L 6 HOH B 29 450 276 HOH HOH . L 6 HOH B 30 451 278 HOH HOH . L 6 HOH B 31 452 280 HOH HOH . L 6 HOH B 32 453 288 HOH HOH . L 6 HOH B 33 454 289 HOH HOH . L 6 HOH B 34 455 290 HOH HOH . L 6 HOH B 35 456 292 HOH HOH . L 6 HOH B 36 457 293 HOH HOH . L 6 HOH B 37 458 298 HOH HOH . L 6 HOH B 38 459 301 HOH HOH . L 6 HOH B 39 460 307 HOH HOH . L 6 HOH B 40 461 310 HOH HOH . L 6 HOH B 41 462 311 HOH HOH . L 6 HOH B 42 463 312 HOH HOH . L 6 HOH B 43 464 313 HOH HOH . L 6 HOH B 44 465 314 HOH HOH . L 6 HOH B 45 466 316 HOH HOH . L 6 HOH B 46 467 322 HOH HOH . L 6 HOH B 47 468 323 HOH HOH . L 6 HOH B 48 469 326 HOH HOH . L 6 HOH B 49 470 327 HOH HOH . L 6 HOH B 50 471 329 HOH HOH . L 6 HOH B 51 472 331 HOH HOH . L 6 HOH B 52 473 335 HOH HOH . L 6 HOH B 53 474 336 HOH HOH . L 6 HOH B 54 475 337 HOH HOH . L 6 HOH B 55 476 338 HOH HOH . L 6 HOH B 56 477 339 HOH HOH . L 6 HOH B 57 478 340 HOH HOH . L 6 HOH B 58 479 341 HOH HOH . L 6 HOH B 59 480 344 HOH HOH . L 6 HOH B 60 481 345 HOH HOH . L 6 HOH B 61 482 346 HOH HOH . L 6 HOH B 62 483 348 HOH HOH . L 6 HOH B 63 484 350 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAA NM7 . . . C 2 -4.143 -69.163 15.709 1 39.6 ? NAA NM7 416 A 1 HETATM 2 N NAB NM7 . . . C 2 -7.422 -74.573 14.94 1 32.76 ? NAB NM7 416 A 1 HETATM 3 O OAC NM7 . . . C 2 -4.26 -70.238 17.661 1 41.66 ? OAC NM7 416 A 1 HETATM 4 O OAD NM7 . . . C 2 -6.981 -72.456 14.28 1 27.81 ? OAD NM7 416 A 1 HETATM 5 F FAE NM7 . . . C 2 -7.156 -75.81 23.459 1 45.15 ? FAE NM7 416 A 1 HETATM 6 C CAF NM7 . . . C 2 -6.797 -75.982 21.11 1 45.41 ? CAF NM7 416 A 1 HETATM 7 C CAG NM7 . . . C 2 -7.015 -73.823 22.153 1 45.88 ? CAG NM7 416 A 1 HETATM 8 C CAH NM7 . . . C 2 -6.628 -75.368 19.875 1 45.94 ? CAH NM7 416 A 1 HETATM 9 C CAI NM7 . . . C 2 -6.846 -73.209 20.917 1 44.77 ? CAI NM7 416 A 1 HETATM 10 C CAJ NM7 . . . C 2 -6.965 -73.856 17.436 1 38.28 ? CAJ NM7 416 A 1 HETATM 11 N NAK NM7 . . . C 2 -5.473 -71.001 15.938 1 41.4 ? NAK NM7 416 A 1 HETATM 12 S SAL NM7 . . . C 2 -5.682 -71.998 18.341 1 44.1 ? SAL NM7 416 A 1 HETATM 13 C CAM NM7 . . . C 2 -4.609 -70.136 16.486 1 40.59 ? CAM NM7 416 A 1 HETATM 14 C CAN NM7 . . . C 2 -7.019 -73.323 15.152 1 33.35 ? CAN NM7 416 A 1 HETATM 15 C CAO NM7 . . . C 2 -6.991 -75.209 22.249 1 45.71 ? CAO NM7 416 A 1 HETATM 16 C CAP NM7 . . . C 2 -6.653 -73.982 19.778 1 44.5 ? CAP NM7 416 A 1 HETATM 17 C CAQ NM7 . . . C 2 -6.491 -73.394 18.596 1 42.37 ? CAQ NM7 416 A 1 HETATM 18 C CAR NM7 . . . C 2 -6.649 -73.055 16.401 1 37.14 ? CAR NM7 416 A 1 HETATM 19 C CAS NM7 . . . C 2 -5.935 -71.971 16.722 1 40.09 ? CAS NM7 416 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #