data_3QGE # _model_server_result.job_id 413lBWERQQFhFUf0C5CRwA _model_server_result.datetime_utc '2024-10-19 12:39:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qge # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 3QGE # _exptl.entry_id 3QGE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 611.59 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-N-(4-methoxybenzyl)-1-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QGE _cell.length_a 66.7 _cell.length_b 91.4 _cell.length_c 232.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QGE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,O 1 1 B,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H28 F3 N5 O7 S' _chem_comp.formula_weight 611.59 _chem_comp.id 26F _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-4-(2,6-dimethoxypyrimidin-4-yl)-N-(4-methoxybenzyl)-1-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 26F doub 92 n y C1 C10 26F sing 93 n y C2 C4 26F sing 94 n y C2 C10 26F doub 95 n y C3 C11 26F sing 96 n y C4 C11 26F doub 97 n y C5 C7 26F doub 98 n y C5 C12 26F sing 99 n y C6 C8 26F sing 100 n y C6 C12 26F doub 101 n y C7 C13 26F sing 102 n y C8 C13 26F doub 103 n y C9 C14 26F doub 104 n y C9 C15 26F sing 105 n y C10 C25 26F sing 106 n n C11 O35 26F sing 107 n n C12 O36 26F sing 108 n n C13 S42 26F sing 109 n n C14 N27 26F sing 110 n y C14 N29 26F sing 111 n n C15 N28 26F doub 112 n y C15 O37 26F sing 113 n n C16 N27 26F doub 114 n y C16 N28 26F sing 115 n y C16 O38 26F sing 116 n n C17 C21 26F sing 117 n n C17 N31 26F sing 118 n n C17 O32 26F doub 119 n n C18 C19 26F sing 120 n n C18 N29 26F sing 121 n n C19 N30 26F sing 122 n n C20 C21 26F sing 123 n n C20 N29 26F sing 124 n n C21 N30 26F sing 125 n n C22 O35 26F sing 126 n n C23 O37 26F sing 127 n n C24 O38 26F sing 128 n n C25 N31 26F sing 129 n n C26 O36 26F sing 130 n n C26 F39 26F sing 131 n n C26 F40 26F sing 132 n n C26 F41 26F sing 133 n n N30 S42 26F sing 134 n n O33 S42 26F doub 135 n n O34 S42 26F doub 136 n n C1 H1 26F sing 137 n n C2 H2 26F sing 138 n n C3 H3 26F sing 139 n n C4 H4 26F sing 140 n n C5 H5 26F sing 141 n n C6 H6 26F sing 142 n n C7 H7 26F sing 143 n n C8 H8 26F sing 144 n n C9 H9 26F sing 145 n n C18 H18 26F sing 146 n n C18 H18A 26F sing 147 n n C19 H19 26F sing 148 n n C19 H19A 26F sing 149 n n C20 H20 26F sing 150 n n C20 H20A 26F sing 151 n n C21 H21 26F sing 152 n n C22 H22 26F sing 153 n n C22 H22A 26F sing 154 n n C22 H22B 26F sing 155 n n C23 H23 26F sing 156 n n C23 H23A 26F sing 157 n n C23 H23B 26F sing 158 n n C24 H24 26F sing 159 n n C24 H24A 26F sing 160 n n C24 H24B 26F sing 161 n n C25 H25 26F sing 162 n n C25 H25A 26F sing 163 n n N31 HN31 26F sing 164 n n # _atom_sites.entry_id 3QGE _atom_sites.fract_transf_matrix[1][1] 0.014993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 23E A 1 601 601 23E 23E . D 3 SO4 A 1 651 651 SO4 SO4 . E 3 SO4 A 1 652 652 SO4 SO4 . F 3 SO4 A 1 653 653 SO4 SO4 . G 3 SO4 A 1 654 654 SO4 SO4 . H 2 23E B 1 601 601 23E 23E . I 4 26F B 1 602 602 26F 26F . J 3 SO4 B 1 653 653 SO4 SO4 . K 3 SO4 B 1 656 656 SO4 SO4 . L 3 SO4 B 1 657 657 SO4 SO4 . M 3 SO4 B 1 652 652 SO4 SO4 . N 3 SO4 B 1 658 658 SO4 SO4 . O 5 HOH A 1 701 701 HOH HOH . O 5 HOH A 2 702 702 HOH HOH . O 5 HOH A 3 703 703 HOH HOH . O 5 HOH A 4 704 704 HOH HOH . P 5 HOH B 1 701 701 HOH HOH . P 5 HOH B 2 702 702 HOH HOH . P 5 HOH B 3 703 703 HOH HOH . P 5 HOH B 4 704 704 HOH HOH . P 5 HOH B 5 705 705 HOH HOH . P 5 HOH B 6 706 706 HOH HOH . P 5 HOH B 7 707 707 HOH HOH . P 5 HOH B 8 708 708 HOH HOH . P 5 HOH B 9 709 709 HOH HOH . P 5 HOH B 10 710 710 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 26F . . . I 4 20.111 6.304 71.856 1 30.16 ? C1 26F 602 B 1 HETATM 2 C C2 26F . . . I 4 22.456 6.905 72.267 1 31.32 ? C2 26F 602 B 1 HETATM 3 C C3 26F . . . I 4 19.743 7.112 72.959 1 36.1 ? C3 26F 602 B 1 HETATM 4 C C4 26F . . . I 4 22.095 7.713 73.368 1 33.9 ? C4 26F 602 B 1 HETATM 5 C C5 26F . . . I 4 28.047 -0.049 73.718 1 48.54 ? C5 26F 602 B 1 HETATM 6 C C6 26F . . . I 4 26.215 0.523 75.226 1 53.44 ? C6 26F 602 B 1 HETATM 7 C C7 26F . . . I 4 27.75 1.06 72.911 1 48.22 ? C7 26F 602 B 1 HETATM 8 C C8 26F . . . I 4 25.904 1.638 74.421 1 53.93 ? C8 26F 602 B 1 HETATM 9 C C9 26F . . . I 4 21.675 0.039 69.139 1 36.89 ? C9 26F 602 B 1 HETATM 10 C C10 26F . . . I 4 21.473 6.209 71.511 1 27.06 ? C10 26F 602 B 1 HETATM 11 C C11 26F . . . I 4 20.722 7.819 73.734 1 37.99 ? C11 26F 602 B 1 HETATM 12 C C12 26F . . . I 4 27.272 -0.33 74.885 1 51.9 ? C12 26F 602 B 1 HETATM 13 C C13 26F . . . I 4 26.67 1.885 73.265 1 50.93 ? C13 26F 602 B 1 HETATM 14 C C14 26F . . . I 4 23.051 0.321 68.901 1 41.58 ? C14 26F 602 B 1 HETATM 15 C C15 26F . . . I 4 20.852 -0.176 68 1 35.15 ? C15 26F 602 B 1 HETATM 16 C C16 26F . . . I 4 22.665 0.087 66.601 1 42.62 ? C16 26F 602 B 1 HETATM 17 C C17 26F . . . I 4 22.619 3.105 71.26 1 29.33 ? C17 26F 602 B 1 HETATM 18 C C18 26F . . . I 4 25.399 0.781 69.628 1 40.69 ? C18 26F 602 B 1 HETATM 19 C C19 26F . . . I 4 25.673 2.276 69.818 1 39.79 ? C19 26F 602 B 1 HETATM 20 C C20 26F . . . I 4 23.717 0.806 71.295 1 39.95 ? C20 26F 602 B 1 HETATM 21 C C21 26F . . . I 4 23.872 2.297 71.618 1 35.82 ? C21 26F 602 B 1 HETATM 22 C C22 26F . . . I 4 18.892 8.577 75.134 1 40.79 ? C22 26F 602 B 1 HETATM 23 C C23 26F . . . I 4 18.68 -0.686 67.1 1 27.47 ? C23 26F 602 B 1 HETATM 24 C C24 26F . . . I 4 24.552 0.413 65.171 1 37.19 ? C24 26F 602 B 1 HETATM 25 C C25 26F . . . I 4 21.898 5.353 70.346 1 22.08 ? C25 26F 602 B 1 HETATM 26 C C26 26F . . . I 4 28.784 -1.657 76.094 1 61.51 ? C26 26F 602 B 1 HETATM 27 N N27 26F . . . I 4 23.515 0.312 67.621 1 43.89 ? N27 26F 602 B 1 HETATM 28 N N28 26F . . . I 4 21.349 -0.158 66.719 1 40.1 ? N28 26F 602 B 1 HETATM 29 N N29 26F . . . I 4 24.002 0.439 69.888 1 42.67 ? N29 26F 602 B 1 HETATM 30 N N30 26F . . . I 4 25.139 2.831 71.087 1 41.57 ? N30 26F 602 B 1 HETATM 31 N N31 26F . . . I 4 22.842 4.342 70.767 1 22.59 ? N31 26F 602 B 1 HETATM 32 O O32 26F . . . I 4 21.509 2.586 71.434 1 27.77 ? O32 26F 602 B 1 HETATM 33 O O33 26F . . . I 4 27.516 3.721 71.602 1 51.71 ? O33 26F 602 B 1 HETATM 34 O O34 26F . . . I 4 25.564 4.213 73.202 1 53.78 ? O34 26F 602 B 1 HETATM 35 O O35 26F . . . I 4 20.276 8.576 74.803 1 38.88 ? O35 26F 602 B 1 HETATM 36 O O36 26F . . . I 4 27.494 -1.376 75.741 1 55.25 ? O36 26F 602 B 1 HETATM 37 O O37 26F . . . I 4 19.514 -0.413 68.212 1 29.04 ? O37 26F 602 B 1 HETATM 38 O O38 26F . . . I 4 23.158 0.116 65.339 1 40.18 ? O38 26F 602 B 1 HETATM 39 F F39 26F . . . I 4 29.496 -0.526 76.355 1 64.08 ? F39 26F 602 B 1 HETATM 40 F F40 26F . . . I 4 28.829 -2.486 77.158 1 62.67 ? F40 26F 602 B 1 HETATM 41 F F41 26F . . . I 4 29.445 -2.286 75.083 1 62.54 ? F41 26F 602 B 1 HETATM 42 S S42 26F . . . I 4 26.276 3.303 72.288 1 50.73 ? S42 26F 602 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 391 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 42 #