data_3QHT # _model_server_result.job_id OOd3Ny0QbfUXR2n3AZIk0A _model_server_result.datetime_utc '2024-12-23 15:22:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":96}' # _entry.id 3QHT # _exptl.entry_id 3QHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QHT _cell.length_a 59.637 _cell.length_b 175.462 _cell.length_c 52.83 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,L,M,O 1 1 B,D,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3QHT _atom_sites.fract_transf_matrix[1][1] 0.016768 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018929 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 99 1 GOL GOL . F 3 GOL A 1 100 3 GOL GOL . G 3 GOL A 1 101 4 GOL GOL . H 3 GOL A 1 102 5 GOL GOL . I 3 GOL A 1 103 6 GOL GOL . J 3 GOL C 1 95 7 GOL GOL . K 3 GOL C 1 96 8 GOL GOL . L 3 GOL C 1 97 9 GOL GOL . M 4 HOH A 1 104 1 HOH HOH . M 4 HOH A 2 105 2 HOH HOH . M 4 HOH A 3 106 9 HOH HOH . M 4 HOH A 4 107 11 HOH HOH . M 4 HOH A 5 108 12 HOH HOH . M 4 HOH A 6 109 15 HOH HOH . M 4 HOH A 7 110 17 HOH HOH . M 4 HOH A 8 111 21 HOH HOH . M 4 HOH A 9 112 24 HOH HOH . M 4 HOH A 10 113 28 HOH HOH . M 4 HOH A 11 114 49 HOH HOH . M 4 HOH A 12 115 52 HOH HOH . M 4 HOH A 13 116 53 HOH HOH . M 4 HOH A 14 117 54 HOH HOH . M 4 HOH A 15 118 71 HOH HOH . M 4 HOH A 16 119 75 HOH HOH . M 4 HOH A 17 120 76 HOH HOH . N 4 HOH B 1 99 4 HOH HOH . N 4 HOH B 2 100 6 HOH HOH . N 4 HOH B 3 101 10 HOH HOH . N 4 HOH B 4 102 22 HOH HOH . N 4 HOH B 5 103 26 HOH HOH . N 4 HOH B 6 104 31 HOH HOH . N 4 HOH B 7 105 32 HOH HOH . N 4 HOH B 8 106 37 HOH HOH . N 4 HOH B 9 107 38 HOH HOH . N 4 HOH B 10 108 47 HOH HOH . N 4 HOH B 11 109 56 HOH HOH . N 4 HOH B 12 110 57 HOH HOH . N 4 HOH B 13 111 58 HOH HOH . N 4 HOH B 14 112 59 HOH HOH . N 4 HOH B 15 113 61 HOH HOH . N 4 HOH B 16 114 78 HOH HOH . O 4 HOH C 1 98 3 HOH HOH . O 4 HOH C 2 99 7 HOH HOH . O 4 HOH C 3 100 14 HOH HOH . O 4 HOH C 4 101 16 HOH HOH . O 4 HOH C 5 102 18 HOH HOH . O 4 HOH C 6 103 20 HOH HOH . O 4 HOH C 7 104 23 HOH HOH . O 4 HOH C 8 105 27 HOH HOH . O 4 HOH C 9 106 30 HOH HOH . O 4 HOH C 10 107 36 HOH HOH . O 4 HOH C 11 108 39 HOH HOH . O 4 HOH C 12 109 44 HOH HOH . O 4 HOH C 13 110 45 HOH HOH . O 4 HOH C 14 111 48 HOH HOH . O 4 HOH C 15 112 50 HOH HOH . O 4 HOH C 16 113 51 HOH HOH . O 4 HOH C 17 114 55 HOH HOH . O 4 HOH C 18 115 60 HOH HOH . O 4 HOH C 19 116 62 HOH HOH . O 4 HOH C 20 117 63 HOH HOH . O 4 HOH C 21 118 64 HOH HOH . O 4 HOH C 22 119 65 HOH HOH . O 4 HOH C 23 120 72 HOH HOH . O 4 HOH C 24 121 73 HOH HOH . O 4 HOH C 25 122 74 HOH HOH . O 4 HOH C 26 123 79 HOH HOH . O 4 HOH C 27 124 80 HOH HOH . O 4 HOH C 28 125 85 HOH HOH . P 4 HOH D 1 95 5 HOH HOH . P 4 HOH D 2 96 8 HOH HOH . P 4 HOH D 3 97 13 HOH HOH . P 4 HOH D 4 98 19 HOH HOH . P 4 HOH D 5 99 25 HOH HOH . P 4 HOH D 6 100 29 HOH HOH . P 4 HOH D 7 101 33 HOH HOH . P 4 HOH D 8 102 34 HOH HOH . P 4 HOH D 9 103 35 HOH HOH . P 4 HOH D 10 104 40 HOH HOH . P 4 HOH D 11 105 41 HOH HOH . P 4 HOH D 12 106 42 HOH HOH . P 4 HOH D 13 107 43 HOH HOH . P 4 HOH D 14 108 46 HOH HOH . P 4 HOH D 15 109 66 HOH HOH . P 4 HOH D 16 110 67 HOH HOH . P 4 HOH D 17 111 68 HOH HOH . P 4 HOH D 18 112 69 HOH HOH . P 4 HOH D 19 113 70 HOH HOH . P 4 HOH D 20 114 77 HOH HOH . P 4 HOH D 21 115 81 HOH HOH . P 4 HOH D 22 116 82 HOH HOH . P 4 HOH D 23 117 83 HOH HOH . P 4 HOH D 24 118 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 3 2.741 -39.864 -29.931 1 46.63 ? C1 GOL 96 C 1 HETATM 2 O O1 GOL . . . K 3 3.135 -38.512 -29.719 1 48.65 ? O1 GOL 96 C 1 HETATM 3 C C2 GOL . . . K 3 2.994 -40.313 -31.386 1 48.12 ? C2 GOL 96 C 1 HETATM 4 O O2 GOL . . . K 3 3.798 -39.366 -32.106 1 41.83 ? O2 GOL 96 C 1 HETATM 5 C C3 GOL . . . K 3 1.679 -40.786 -32.057 1 47.7 ? C3 GOL 96 C 1 HETATM 6 O O3 GOL . . . K 3 1.69 -40.918 -33.475 1 47.54 ? O3 GOL 96 C 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #