data_3QI2 # _model_server_result.job_id PUGJTKoCGfuEhg1g84KcYg _model_server_result.datetime_utc '2024-11-22 22:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":3}' # _entry.id 3QI2 # _exptl.entry_id 3QI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QI2 _cell.length_a 70.003 _cell.length_b 131.018 _cell.length_c 203.307 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,J,L 1 1 B,D,H,I,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 174 n n C1 C2 GOL sing 175 n n C1 H11 GOL sing 176 n n C1 H12 GOL sing 177 n n O1 HO1 GOL sing 178 n n C2 O2 GOL sing 179 n n C2 C3 GOL sing 180 n n C2 H2 GOL sing 181 n n O2 HO2 GOL sing 182 n n C3 O3 GOL sing 183 n n C3 H31 GOL sing 184 n n C3 H32 GOL sing 185 n n O3 HO3 GOL sing 186 n n # _atom_sites.entry_id 3QI2 _atom_sites.fract_transf_matrix[1][1] 0.014285 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007633 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GDP A 1 355 355 GDP GDP . F 4 SO4 A 1 2 2 SO4 SO4 . G 5 GOL A 1 3 3 GOL GOL . H 3 GDP B 1 356 356 GDP GDP . I 4 SO4 B 1 1 1 SO4 SO4 . J 6 HOH A 1 4 4 HOH HOH . J 6 HOH A 2 6 6 HOH HOH . J 6 HOH A 3 7 7 HOH HOH . J 6 HOH A 4 8 8 HOH HOH . J 6 HOH A 5 12 12 HOH HOH . J 6 HOH A 6 14 14 HOH HOH . J 6 HOH A 7 15 15 HOH HOH . J 6 HOH A 8 17 17 HOH HOH . J 6 HOH A 9 19 19 HOH HOH . J 6 HOH A 10 20 20 HOH HOH . J 6 HOH A 11 25 25 HOH HOH . J 6 HOH A 12 356 3 HOH HOH . J 6 HOH A 13 357 27 HOH HOH . J 6 HOH A 14 358 29 HOH HOH . J 6 HOH A 15 359 31 HOH HOH . J 6 HOH A 16 360 33 HOH HOH . J 6 HOH A 17 361 35 HOH HOH . J 6 HOH A 18 362 36 HOH HOH . J 6 HOH A 19 363 38 HOH HOH . K 6 HOH B 1 2 2 HOH HOH . K 6 HOH B 2 5 5 HOH HOH . K 6 HOH B 3 10 10 HOH HOH . K 6 HOH B 4 11 11 HOH HOH . K 6 HOH B 5 13 13 HOH HOH . K 6 HOH B 6 16 16 HOH HOH . K 6 HOH B 7 18 18 HOH HOH . K 6 HOH B 8 21 21 HOH HOH . K 6 HOH B 9 26 26 HOH HOH . K 6 HOH B 10 355 1 HOH HOH . K 6 HOH B 11 357 28 HOH HOH . K 6 HOH B 12 358 34 HOH HOH . K 6 HOH B 13 359 39 HOH HOH . L 6 HOH C 1 22 22 HOH HOH . L 6 HOH C 2 32 32 HOH HOH . M 6 HOH D 1 9 9 HOH HOH . M 6 HOH D 2 30 30 HOH HOH . M 6 HOH D 3 37 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 -27.236 14.132 50.752 1 59.01 ? C1 GOL 3 A 1 HETATM 2 O O1 GOL . . . G 5 -27.904 15.355 50.531 1 48.46 ? O1 GOL 3 A 1 HETATM 3 C C2 GOL . . . G 5 -27.117 13.389 49.426 1 52.52 ? C2 GOL 3 A 1 HETATM 4 O O2 GOL . . . G 5 -28.174 12.463 49.328 1 44.9 ? O2 GOL 3 A 1 HETATM 5 C C3 GOL . . . G 5 -25.79 12.647 49.331 1 52.38 ? C3 GOL 3 A 1 HETATM 6 O O3 GOL . . . G 5 -25.665 12.093 48.044 1 51.78 ? O3 GOL 3 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #