data_3QI3 # _model_server_result.job_id Aw4_rFYIJ3x3KnGFBKJELA _model_server_result.datetime_utc '2024-11-29 05:23:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qi3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":534}' # _entry.id 3QI3 # _exptl.entry_id 3QI3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QI3 _cell.length_a 103.127 _cell.length_b 103.127 _cell.length_c 270.441 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QI3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_645 -y+3/2,x-1/2,z+1/4 0 -1 0 1 0 0 0 0 1 154.6905 -51.5635 67.61025 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 256 A HIS 256 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc2 A NE2 HIS 292 A HIS 292 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 A OD2 ASP 293 A ASP 293 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc4 A OD1 ASP 293 A ASP 293 1_555 E MG MG . A MG 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc5 A OD1 ASP 402 A ASP 402 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc6 D ZN ZN . A ZN 534 1_555 I O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc7 D ZN ZN . A ZN 534 1_555 I O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc8 E MG MG . A MG 535 1_555 I O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc9 E MG MG . A MG 535 1_555 I O HOH . A HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc10 E MG MG . A MG 535 1_555 I O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc11 E MG MG . A MG 535 1_555 I O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc12 E MG MG . A MG 535 1_555 I O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc13 B NE2 HIS 256 B HIS 256 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc14 B NE2 HIS 292 B HIS 292 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc15 B OD2 ASP 293 B ASP 293 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc16 B OD1 ASP 293 B ASP 293 1_555 H MG MG . B MG 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc17 B OD1 ASP 402 B ASP 402 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc18 G ZN ZN . B ZN 534 1_555 J O HOH . B HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc19 H MG MG . B MG 535 1_555 J O HOH . B HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc20 H MG MG . B MG 535 1_555 J O HOH . B HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc21 H MG MG . B MG 535 1_555 J O HOH . B HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc22 H MG MG . B MG 535 1_555 J O HOH . B HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc23 H MG MG . B MG 535 1_555 J O HOH . B HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QI3 _atom_sites.fract_transf_matrix[1][1] 0.009697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PDB A 1 600 600 PDB PDB . D 3 ZN A 1 534 101 ZN ZN . E 4 MG A 1 535 102 MG MG . F 2 PDB B 1 600 600 PDB PDB . G 3 ZN B 1 534 101 ZN ZN . H 4 MG B 1 535 102 MG MG . I 5 HOH A 1 536 1 HOH TIP . I 5 HOH A 2 537 2 HOH TIP . I 5 HOH A 3 538 3 HOH TIP . I 5 HOH A 4 539 4 HOH TIP . I 5 HOH A 5 540 5 HOH TIP . I 5 HOH A 6 541 6 HOH TIP . I 5 HOH A 7 542 7 HOH TIP . I 5 HOH A 8 543 8 HOH TIP . I 5 HOH A 9 544 9 HOH TIP . I 5 HOH A 10 545 10 HOH TIP . I 5 HOH A 11 546 19 HOH TIP . I 5 HOH A 12 547 20 HOH TIP . I 5 HOH A 13 548 22 HOH TIP . I 5 HOH A 14 549 23 HOH TIP . J 5 HOH B 1 536 11 HOH TIP . J 5 HOH B 2 537 12 HOH TIP . J 5 HOH B 3 538 13 HOH TIP . J 5 HOH B 4 539 14 HOH TIP . J 5 HOH B 5 540 15 HOH TIP . J 5 HOH B 6 541 16 HOH TIP . J 5 HOH B 7 542 17 HOH TIP . J 5 HOH B 8 543 18 HOH TIP . J 5 HOH B 9 544 21 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 84.375 _atom_site.Cartn_y 47.582 _atom_site.Cartn_z 42.782 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 534 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #