data_3QI3 # _model_server_result.job_id Bmji_Ey8wXFyQjcySptDag _model_server_result.datetime_utc '2024-11-29 05:21:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qi3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 3QI3 # _exptl.entry_id 3QI3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.73 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2-chlorophenyl)-6-[(2R)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QI3 _cell.length_a 103.127 _cell.length_b 103.127 _cell.length_c 270.441 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QI3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_645 -y+3/2,x-1/2,z+1/4 0 -1 0 1 0 0 0 0 1 154.6905 -51.5635 67.61025 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 256 A HIS 256 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc2 A NE2 HIS 292 A HIS 292 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc3 A OD2 ASP 293 A ASP 293 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc4 A OD1 ASP 293 A ASP 293 1_555 E MG MG . A MG 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc5 A OD1 ASP 402 A ASP 402 1_555 D ZN ZN . A ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc6 D ZN ZN . A ZN 534 1_555 I O HOH . A HOH 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc7 D ZN ZN . A ZN 534 1_555 I O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc8 E MG MG . A MG 535 1_555 I O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc9 E MG MG . A MG 535 1_555 I O HOH . A HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc10 E MG MG . A MG 535 1_555 I O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc11 E MG MG . A MG 535 1_555 I O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc12 E MG MG . A MG 535 1_555 I O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc13 B NE2 HIS 256 B HIS 256 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc14 B NE2 HIS 292 B HIS 292 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc15 B OD2 ASP 293 B ASP 293 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc16 B OD1 ASP 293 B ASP 293 1_555 H MG MG . B MG 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc17 B OD1 ASP 402 B ASP 402 1_555 G ZN ZN . B ZN 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc18 G ZN ZN . B ZN 534 1_555 J O HOH . B HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc19 H MG MG . B MG 535 1_555 J O HOH . B HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc20 H MG MG . B MG 535 1_555 J O HOH . B HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc21 H MG MG . B MG 535 1_555 J O HOH . B HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc22 H MG MG . B MG 535 1_555 J O HOH . B HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc23 H MG MG . B MG 535 1_555 J O HOH . B HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? # _chem_comp.formula 'C15 H12 Cl F3 N4 O' _chem_comp.formula_weight 356.73 _chem_comp.id PDB _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2-chlorophenyl)-6-[(2R)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 PDB doub 237 n y C4 C5 PDB sing 238 n y C3 C2 PDB sing 239 n y C5 C6 PDB doub 240 n y C20 C19 PDB sing 241 n n C2 CL1 PDB sing 242 n n C2 C7 PDB doub 243 n y C6 C7 PDB sing 244 n y C7 N8 PDB sing 245 n n C19 C18 PDB sing 246 n n C19 C21 PDB sing 247 n n C18 C14 PDB sing 248 n n F7 C21 PDB sing 249 n n N13 C14 PDB sing 250 n n N13 C11 PDB sing 251 n n C21 F6 PDB sing 252 n n C21 F5 PDB sing 253 n n N8 C11 PDB sing 254 n y N8 N9 PDB sing 255 n y C14 N15 PDB doub 256 n n C11 C12 PDB doub 257 n y N9 C10 PDB doub 258 n y N15 C16 PDB sing 259 n n C12 C10 PDB sing 260 n y C12 C16 PDB sing 261 n n C16 O17 PDB doub 262 n n C3 H1 PDB sing 263 n n C4 H2 PDB sing 264 n n C5 H3 PDB sing 265 n n C6 H4 PDB sing 266 n n C10 H5 PDB sing 267 n n N13 H6 PDB sing 268 n n C18 H7 PDB sing 269 n n C18 H8 PDB sing 270 n n C19 H9 PDB sing 271 n n C20 H10 PDB sing 272 n n C20 H11 PDB sing 273 n n C20 H12 PDB sing 274 n n # _atom_sites.entry_id 3QI3 _atom_sites.fract_transf_matrix[1][1] 0.009697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PDB A 1 600 600 PDB PDB . D 3 ZN A 1 534 101 ZN ZN . E 4 MG A 1 535 102 MG MG . F 2 PDB B 1 600 600 PDB PDB . G 3 ZN B 1 534 101 ZN ZN . H 4 MG B 1 535 102 MG MG . I 5 HOH A 1 536 1 HOH TIP . I 5 HOH A 2 537 2 HOH TIP . I 5 HOH A 3 538 3 HOH TIP . I 5 HOH A 4 539 4 HOH TIP . I 5 HOH A 5 540 5 HOH TIP . I 5 HOH A 6 541 6 HOH TIP . I 5 HOH A 7 542 7 HOH TIP . I 5 HOH A 8 543 8 HOH TIP . I 5 HOH A 9 544 9 HOH TIP . I 5 HOH A 10 545 10 HOH TIP . I 5 HOH A 11 546 19 HOH TIP . I 5 HOH A 12 547 20 HOH TIP . I 5 HOH A 13 548 22 HOH TIP . I 5 HOH A 14 549 23 HOH TIP . J 5 HOH B 1 536 11 HOH TIP . J 5 HOH B 2 537 12 HOH TIP . J 5 HOH B 3 538 13 HOH TIP . J 5 HOH B 4 539 14 HOH TIP . J 5 HOH B 5 540 15 HOH TIP . J 5 HOH B 6 541 16 HOH TIP . J 5 HOH B 7 542 17 HOH TIP . J 5 HOH B 8 543 18 HOH TIP . J 5 HOH B 9 544 21 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PDB . . . C 2 77.753 49.872 40.433 1 50.44 ? C2 PDB 600 A 1 HETATM 2 C C3 PDB . . . C 2 78.32 49.777 39.167 1 48.74 ? C3 PDB 600 A 1 HETATM 3 C C4 PDB . . . C 2 79.586 50.298 38.924 1 47.51 ? C4 PDB 600 A 1 HETATM 4 C C5 PDB . . . C 2 80.284 50.918 39.955 1 47.7 ? C5 PDB 600 A 1 HETATM 5 F F5 PDB . . . C 2 71.938 55.15 41.741 1 70.8 ? F5 PDB 600 A 1 HETATM 6 C C6 PDB . . . C 2 79.716 51.013 41.22 1 46.24 ? C6 PDB 600 A 1 HETATM 7 F F6 PDB . . . C 2 72.755 54.399 39.815 1 66.79 ? F6 PDB 600 A 1 HETATM 8 C C7 PDB . . . C 2 78.45 50.49 41.469 1 49.34 ? C7 PDB 600 A 1 HETATM 9 F F7 PDB . . . C 2 73.475 56.328 40.649 1 66.55 ? F7 PDB 600 A 1 HETATM 10 N N8 PDB . . . C 2 77.951 50.569 42.718 1 50.19 ? N8 PDB 600 A 1 HETATM 11 N N9 PDB . . . C 2 78.56 50.179 43.744 1 51.42 ? N9 PDB 600 A 1 HETATM 12 C C10 PDB . . . C 2 77.885 50.481 44.873 1 49.94 ? C10 PDB 600 A 1 HETATM 13 C C11 PDB . . . C 2 76.788 51.16 43.081 1 52.08 ? C11 PDB 600 A 1 HETATM 14 C C12 PDB . . . C 2 76.726 51.128 44.466 1 53.07 ? C12 PDB 600 A 1 HETATM 15 N N13 PDB . . . C 2 75.78 51.745 42.381 1 53.32 ? N13 PDB 600 A 1 HETATM 16 C C14 PDB . . . C 2 74.717 52.301 43.027 1 56.5 ? C14 PDB 600 A 1 HETATM 17 N N15 PDB . . . C 2 74.642 52.283 44.387 1 54.36 ? N15 PDB 600 A 1 HETATM 18 C C16 PDB . . . C 2 75.646 51.699 45.129 1 54.36 ? C16 PDB 600 A 1 HETATM 19 O O17 PDB . . . C 2 75.608 51.739 46.359 1 56.05 ? O17 PDB 600 A 1 HETATM 20 C C18 PDB . . . C 2 73.624 52.993 42.232 1 61.17 ? C18 PDB 600 A 1 HETATM 21 C C19 PDB . . . C 2 74.151 54.336 41.72 1 65.27 ? C19 PDB 600 A 1 HETATM 22 C C20 PDB . . . C 2 75.33 54.087 40.778 1 68.6 ? C20 PDB 600 A 1 HETATM 23 C C21 PDB . . . C 2 73.047 55.073 40.959 1 67.22 ? C21 PDB 600 A 1 HETATM 24 CL CL1 PDB . . . C 2 76.186 49.217 40.695 1 57.91 ? CL1 PDB 600 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 24 #