data_3QIC # _model_server_result.job_id 2bKDSts4NveHcOA53TjrHA _model_server_result.datetime_utc '2024-12-22 10:22:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":604}' # _entry.id 3QIC # _exptl.entry_id 3QIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QIC _cell.length_a 80.74 _cell.length_b 80.74 _cell.length_c 178.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 415 A GLY 410 1_555 A N SEP 416 A SEP 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C SEP 416 A SEP 411 1_555 A N VAL 417 A VAL 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 153 n n C1 C2 GOL sing 154 n n C1 H11 GOL sing 155 n n C1 H12 GOL sing 156 n n O1 HO1 GOL sing 157 n n C2 O2 GOL sing 158 n n C2 C3 GOL sing 159 n n C2 H2 GOL sing 160 n n O2 HO2 GOL sing 161 n n C3 O3 GOL sing 162 n n C3 H31 GOL sing 163 n n C3 H32 GOL sing 164 n n O3 HO3 GOL sing 165 n n # _atom_sites.entry_id 3QIC _atom_sites.fract_transf_matrix[1][1] 0.012385 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005605 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLC A 1 500 500 GLC GLC . C 3 GOL A 1 600 600 GOL GOL . D 3 GOL A 1 601 601 GOL GOL . E 3 GOL A 1 602 602 GOL GOL . F 3 GOL A 1 603 603 GOL GOL . G 3 GOL A 1 604 604 GOL GOL . H 3 GOL A 1 605 605 GOL GOL . I 4 HOH A 1 700 700 HOH HOH . I 4 HOH A 2 701 701 HOH HOH . I 4 HOH A 3 702 702 HOH HOH . I 4 HOH A 4 703 703 HOH HOH . I 4 HOH A 5 704 704 HOH HOH . I 4 HOH A 6 705 705 HOH HOH . I 4 HOH A 7 706 706 HOH HOH . I 4 HOH A 8 707 707 HOH HOH . I 4 HOH A 9 708 708 HOH HOH . I 4 HOH A 10 709 709 HOH HOH . I 4 HOH A 11 710 710 HOH HOH . I 4 HOH A 12 711 711 HOH HOH . I 4 HOH A 13 712 712 HOH HOH . I 4 HOH A 14 713 713 HOH HOH . I 4 HOH A 15 714 714 HOH HOH . I 4 HOH A 16 715 715 HOH HOH . I 4 HOH A 17 716 716 HOH HOH . I 4 HOH A 18 717 717 HOH HOH . I 4 HOH A 19 718 718 HOH HOH . I 4 HOH A 20 719 719 HOH HOH . I 4 HOH A 21 720 720 HOH HOH . I 4 HOH A 22 721 721 HOH HOH . I 4 HOH A 23 722 722 HOH HOH . I 4 HOH A 24 723 723 HOH HOH . I 4 HOH A 25 724 724 HOH HOH . I 4 HOH A 26 725 725 HOH HOH . I 4 HOH A 27 726 726 HOH HOH . I 4 HOH A 28 727 727 HOH HOH . I 4 HOH A 29 728 728 HOH HOH . I 4 HOH A 30 729 729 HOH HOH . I 4 HOH A 31 730 730 HOH HOH . I 4 HOH A 32 731 731 HOH HOH . I 4 HOH A 33 732 732 HOH HOH . I 4 HOH A 34 733 733 HOH HOH . I 4 HOH A 35 734 734 HOH HOH . I 4 HOH A 36 735 735 HOH HOH . I 4 HOH A 37 736 736 HOH HOH . I 4 HOH A 38 737 737 HOH HOH . I 4 HOH A 39 738 738 HOH HOH . I 4 HOH A 40 739 739 HOH HOH . I 4 HOH A 41 740 740 HOH HOH . I 4 HOH A 42 741 741 HOH HOH . I 4 HOH A 43 742 742 HOH HOH . I 4 HOH A 44 743 743 HOH HOH . I 4 HOH A 45 744 744 HOH HOH . I 4 HOH A 46 745 745 HOH HOH . I 4 HOH A 47 746 746 HOH HOH . I 4 HOH A 48 747 747 HOH HOH . I 4 HOH A 49 748 748 HOH HOH . I 4 HOH A 50 749 749 HOH HOH . I 4 HOH A 51 750 750 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 54.816 -9.968 80.612 0.95 51.76 ? C1 GOL 604 A 1 HETATM 2 O O1 GOL . . . G 3 53.913 -11.048 80.575 0.95 55.87 ? O1 GOL 604 A 1 HETATM 3 C C2 GOL . . . G 3 55.842 -10.28 81.692 0.95 63.06 ? C2 GOL 604 A 1 HETATM 4 O O2 GOL . . . G 3 56.359 -11.57 81.446 0.95 70.13 ? O2 GOL 604 A 1 HETATM 5 C C3 GOL . . . G 3 56.984 -9.273 81.666 0.95 63.51 ? C3 GOL 604 A 1 HETATM 6 O O3 GOL . . . G 3 57.714 -9.408 82.866 0.95 67.84 ? O3 GOL 604 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #